RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Ppef1O35655 650 aa28.58■■■□□ 2.17
Pcf11-204ENSMUST00000208058 Zfyve9A2A8R0 1397 aa28.58■■■□□ 2.17
Pcf11-204ENSMUST00000208058 Myo5bP21271 1818 aa28.57■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Zcwpw1Q6IR42 630 aa28.57■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Mrps5Q99N87 432 aaKnown RBP28.57■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Mapk8ip2Q9ERE9 830 aa28.57■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Rnf180Q3U827 592 aa28.55■■■□□ 2.16
Pcf11-204ENSMUST00000208058 RtcbQ99LF4 505 aaKnown RBP28.55■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Cabp2Q9JLK4 216 aa28.55■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Togaram1Q6A070 1776 aaKnown RBP28.55■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Efcab2Q9CQ46 164 aa28.54■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Adcy9P51830 1353 aa28.52■■■□□ 2.16
Pcf11-204ENSMUST00000208058 Pde4dQ01063 747 aa28.52■■■□□ 2.16
Pcf11-204ENSMUST00000208058 CpzQ8R4V4 654 aa28.5■■■□□ 2.15
Pcf11-204ENSMUST00000208058 Iqcf3Q9D498 203 aa28.5■■■□□ 2.15
Pcf11-204ENSMUST00000208058 Lrrc43Q3V0L5 667 aa28.48■■■□□ 2.15
Pcf11-204ENSMUST00000208058 Tcerg1Q8CGF7 1100 aaKnown RBP28.48■■■□□ 2.15
Pcf11-204ENSMUST00000208058 ScaperF8VQ70 1398 aaKnown RBP28.48■■■□□ 2.15
Pcf11-204ENSMUST00000208058 DiexfQ8BTT6 772 aaKnown RBP28.47■■■□□ 2.15
Pcf11-204ENSMUST00000208058 Q4VA45 678 aa28.46■■■□□ 2.15
Pcf11-204ENSMUST00000208058 StrcQ8VIM6 1809 aa28.46■■■□□ 2.15
Pcf11-204ENSMUST00000208058 Igf2rQ07113 2483 aaKnown RBP28.45■■■□□ 2.15
Pcf11-204ENSMUST00000208058 Tlr8P58682 1032 aa28.44■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Amhr2Q8K592 568 aa28.44■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Syde2E9PUP1 1314 aa28.43■■■□□ 2.14
Pcf11-204ENSMUST00000208058 1810065E05RikQ5NC41 235 aa28.42■■■□□ 2.14
Pcf11-204ENSMUST00000208058 HmcesQ8R1M0 353 aaKnown RBP28.42■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Aebp2Q9Z248 504 aaKnown RBP28.42■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Casz1Q9CWL2 1761 aa28.42■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Rtf1A2AQ19 715 aaKnown RBP28.41■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Slfnl1Q8BHW9 410 aa28.41■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Clcn1Q64347 994 aa28.4■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Q7TT23 1179 aa28.4■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Anp32bQ9EST5 272 aaKnown RBP28.4■■■□□ 2.14
Pcf11-204ENSMUST00000208058 PigbQ9JJQ0 542 aa28.4■■■□□ 2.14
Pcf11-204ENSMUST00000208058 MetP16056 1379 aa28.39■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Kcnn1Q9EQR3 537 aa28.39■■■□□ 2.14
Pcf11-204ENSMUST00000208058 Tgfb2P27090 414 aa28.38■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Camkk2Q8C078 588 aa28.38■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Zbtb1Q91VL9 713 aa28.38■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Btbd11Q6GQW0 1109 aa28.37■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Mylk2Q8VCR8 613 aa28.36■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Atp1b3P97370 278 aa28.35■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Srp68Q8BMA6 625 aaKnown RBP28.35■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Rnaseh2aQ9CWY8 301 aa28.35■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Rpgrip1lQ8CG73 1264 aa28.34■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Gpr162Q3UN16 588 aa28.33■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Mapk8ip3Q9ESN9 1337 aa28.33■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Znf541Q0GGX2 1363 aa28.33■■■□□ 2.13
Pcf11-204ENSMUST00000208058 Taf1dQ9D4V4 322 aa28.32■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Col4a1P02463 1669 aa28.32■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Apaf1O88879 1249 aa28.31■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Cyp2c67Q569X9 491 aa28.3■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Ddx60E9PZQ1 1711 aa28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Usp19Q3UJD6 1360 aa28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Atf7ipQ7TT18 1306 aa28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Yy1Q00899 414 aa28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Nip7Q9CXK8 180 aaKnown RBP28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Trip6Q9Z1Y4 480 aa28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Frmpd3A0A140LIW3 1774 aa28.29■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Cfap70D3YVL2 1141 aa28.28■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Lama4P97927 1816 aa28.27■■■□□ 2.12
Pcf11-204ENSMUST00000208058 Ubn2Q80WC1 1314 aa28.26■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Cyp2c69E9PXC3 491 aa28.26■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Cyp2c40P56657 491 aa28.26■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Dpf1Q9QX66 387 aa28.26■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Itgb4A2A863 1818 aa28.26■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Gm12185Q5NCB2 835 aa28.25■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Prim1P20664 417 aa28.24■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Wdhd1P59328 1117 aa28.24■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Slc34a2Q9DBP0 697 aa28.24■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Cers3Q1A3B0 383 aa28.23■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Rbm26Q6NZN0 1012 aaKnown RBP28.23■■■□□ 2.11
Pcf11-204ENSMUST00000208058 SnrkQ8VDU5 748 aa28.23■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Nsfl1cQ9CZ44 370 aaKnown RBP28.23■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Tktl2Q9D4D4 627 aa28.23■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Cnnm1Q0GA42 951 aa28.22■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Iqsec3Q3TES0 1195 aa28.22■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Slurp2P0DP59 97 aa28.21■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Ggnbp2Q5SV77 696 aa28.21■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Flad1Q8R123 492 aa28.21■■■□□ 2.11
Pcf11-204ENSMUST00000208058 TefQ9JLC6 301 aa28.21■■■□□ 2.11
Pcf11-204ENSMUST00000208058 Prr5lA2AVJ5 370 aa28.2■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Rapgef4Q9EQZ6 1011 aa28.2■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Col1a2Q01149 1372 aa28.2■■■□□ 2.1
Pcf11-204ENSMUST00000208058 FktnQ8R507 461 aa28.19■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Gigyf1Q99MR1 1044 aaKnown RBP28.19■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Irx6Q9ER75 438 aa28.19■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Strn4P58404 760 aa28.18■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Uhrf1bp1B2KF50 1429 aa28.18■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Col4a5Q63ZW6 1691 aa28.17■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Cavin4A2AMM0 362 aa28.17■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Wdr66E9Q743 1299 aa28.17■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Megf6Q80V70 1572 aa28.16■■■□□ 2.1
Pcf11-204ENSMUST00000208058 IarsQ8BU30 1262 aa28.16■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Prkab2Q6PAM0 271 aa28.15■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Ambra1A2AH22 1300 aa28.15■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Adgre1Q61549 931 aa28.14■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Pdia6Q922R8 440 aaKnown RBP28.14■■■□□ 2.1
Pcf11-204ENSMUST00000208058 Prr29B1ARI9 187 aa28.13■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms