RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Atg3Q9CPX6 314 aa11.1□□□□□ -0.63
Trim40-203ENSMUST00000172711 Kcnn1Q9EQR3 537 aa11.1□□□□□ -0.63
Trim40-203ENSMUST00000172711 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.09□□□□□ -0.63
Trim40-203ENSMUST00000172711 Spata31d1bE9QA57 1361 aa11.09□□□□□ -0.63
Trim40-203ENSMUST00000172711 Msh6P54276 1358 aaKnown RBP11.09□□□□□ -0.63
Trim40-203ENSMUST00000172711 Adgre1Q61549 931 aa11.09□□□□□ -0.63
Trim40-203ENSMUST00000172711 Eif3bQ8JZQ9 803 aaKnown RBP11.09□□□□□ -0.63
Trim40-203ENSMUST00000172711 Cyp2c69E9PXC3 491 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Hmgb2P30681 210 aaKnown RBP11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Cyp2c40P56657 491 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Nkx2-3P97334 362 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Smarcc1P97496 1104 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Miga2Q8BK03 593 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Plin1Q8CGN5 517 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Cap2Q9CYT6 476 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Phkg2Q9DB30 406 aa11.08□□□□□ -0.64
Trim40-203ENSMUST00000172711 Rsph6aQ8CDR2 708 aa11.07□□□□□ -0.64
Trim40-203ENSMUST00000172711 Taf1dQ9D4V4 322 aa11.07□□□□□ -0.64
Trim40-203ENSMUST00000172711 Pdzd9Q9D9M4 266 aa11.07□□□□□ -0.64
Trim40-203ENSMUST00000172711 Fam122aQ9DB52 284 aa11.07□□□□□ -0.64
Trim40-203ENSMUST00000172711 Sos1Q62245 1319 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Tmf1B9EKI3 1091 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Cyp2c67Q569X9 491 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 1810065E05RikQ5NC41 235 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Trim28Q62318 834 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Dcaf5Q80T85 946 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Slfnl1Q8BHW9 410 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Frmpd3A0A140LIW3 1774 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Ubr2Q6WKZ8 1755 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Kndc1Q0KK55 1742 aa11.05□□□□□ -0.64
Trim40-203ENSMUST00000172711 Slurp2P0DP59 97 aa11.04□□□□□ -0.64
Trim40-203ENSMUST00000172711 Socs7Q8VHQ2 579 aa11.04□□□□□ -0.64
Trim40-203ENSMUST00000172711 Ssfa2Q922B9 1252 aa11.04□□□□□ -0.64
Trim40-203ENSMUST00000172711 Megf6Q80V70 1572 aa11.04□□□□□ -0.64
Trim40-203ENSMUST00000172711 Znf704Q9ERQ3 566 aa11.04□□□□□ -0.64
Trim40-203ENSMUST00000172711 ScaperF8VQ70 1398 aaKnown RBP11.03□□□□□ -0.64
Trim40-203ENSMUST00000172711 Col4a5Q63ZW6 1691 aa11.03□□□□□ -0.64
Trim40-203ENSMUST00000172711 Mcm10Q0VBD2 885 aa11.03□□□□□ -0.64
Trim40-203ENSMUST00000172711 Cwc22Q8C5N3 908 aaKnown RBP11.03□□□□□ -0.64
Trim40-203ENSMUST00000172711 Aox2Q5SGK3 1345 aa11.02□□□□□ -0.65
Trim40-203ENSMUST00000172711 Gprasp1Q5U4C1 1347 aa11.02□□□□□ -0.65
Trim40-203ENSMUST00000172711 Tgfb2P27090 414 aa11.02□□□□□ -0.65
Trim40-203ENSMUST00000172711 Jmjd4Q8BFT6 427 aa11.02□□□□□ -0.65
Trim40-203ENSMUST00000172711 FktnQ8R507 461 aa11.02□□□□□ -0.65
Trim40-203ENSMUST00000172711 Spon1Q8VCC9 807 aa11.02□□□□□ -0.65
Trim40-203ENSMUST00000172711 Akap2O54931 893 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 Ppp1r15aP17564 657 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 EgfrQ01279 1210 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 Clcn1Q64347 994 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 Slc12a5Q91V14 1138 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 Spock2Q9ER58 423 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 P2rx7Q9Z1M0 595 aa11.01□□□□□ -0.65
Trim40-203ENSMUST00000172711 PnisrA2AJT4 805 aaKnown RBP11□□□□□ -0.65
Trim40-203ENSMUST00000172711 Klrk1O54709 232 aa11□□□□□ -0.65
Trim40-203ENSMUST00000172711 Zscan10Q3URR7 782 aa11□□□□□ -0.65
Trim40-203ENSMUST00000172711 Lrrc43Q3V0L5 667 aa11□□□□□ -0.65
Trim40-203ENSMUST00000172711 RtcbQ99LF4 505 aaKnown RBP11□□□□□ -0.65
Trim40-203ENSMUST00000172711 Ric1Q69ZJ7 1422 aa11□□□□□ -0.65
Trim40-203ENSMUST00000172711 Ccdc155Q80VJ8 648 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Srp68Q8BMA6 625 aaKnown RBP10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Itgb4A2A863 1818 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Tiam2Q6ZPF3 1715 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Cyp2c68K7N6C2 491 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Snap23O09044 210 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 B4galnt4Q766D5 1034 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Chmp7Q8R1T1 451 aa10.99□□□□□ -0.65
Trim40-203ENSMUST00000172711 Cald1E9QA15 768 aaKnown RBP10.98□□□□□ -0.65
Trim40-203ENSMUST00000172711 Amhr2Q8K592 568 aa10.98□□□□□ -0.65
Trim40-203ENSMUST00000172711 Tktl2Q9D4D4 627 aa10.98□□□□□ -0.65
Trim40-203ENSMUST00000172711 Nav1Q8CH77 1875 aa10.97□□□□□ -0.65
Trim40-203ENSMUST00000172711 TrhQ62361 256 aa10.97□□□□□ -0.65
Trim40-203ENSMUST00000172711 Amotl1Q9D4H4 968 aa10.97□□□□□ -0.65
Trim40-203ENSMUST00000172711 Syde2E9PUP1 1314 aa10.97□□□□□ -0.65
Trim40-203ENSMUST00000172711 TnikP83510 1323 aa10.97□□□□□ -0.65
Trim40-203ENSMUST00000172711 Col4a1P02463 1669 aa10.97□□□□□ -0.65
Trim40-203ENSMUST00000172711 Slc4a5E9Q3M5 1116 aa10.96□□□□□ -0.65
Trim40-203ENSMUST00000172711 Nedd4P46935 887 aaKnown RBP10.96□□□□□ -0.65
Trim40-203ENSMUST00000172711 Skap1Q3UUV5 355 aa10.96□□□□□ -0.65
Trim40-203ENSMUST00000172711 Smg7Q5RJH6 1138 aaKnown RBP10.96□□□□□ -0.65
Trim40-203ENSMUST00000172711 SnrkQ8VDU5 748 aa10.96□□□□□ -0.65
Trim40-203ENSMUST00000172711 HypkQ9CR41 129 aa10.96□□□□□ -0.65
Trim40-203ENSMUST00000172711 MycnP03966 462 aaKnown RBP10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 Gsdma3Q5Y4Y6 464 aa10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 HmcesQ8R1M0 353 aaKnown RBP10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 AceP09470 1312 aa10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 Atp1b3P97370 278 aa10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 PalmQ9Z0P4 383 aa10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 Trip6Q9Z1Y4 480 aa10.94□□□□□ -0.66
Trim40-203ENSMUST00000172711 NogP97466 232 aa10.93□□□□□ -0.66
Trim40-203ENSMUST00000172711 Ripply1Q2WG77 201 aa10.93□□□□□ -0.66
Trim40-203ENSMUST00000172711 IarsQ8BU30 1262 aa10.93□□□□□ -0.66
Trim40-203ENSMUST00000172711 Efcab2Q9CQ46 164 aa10.93□□□□□ -0.66
Trim40-203ENSMUST00000172711 Zbtb1Q91VL9 713 aa10.92□□□□□ -0.66
Trim40-203ENSMUST00000172711 Col24a1Q30D77 1733 aa10.91□□□□□ -0.66
Trim40-203ENSMUST00000172711 Cfap70D3YVL2 1141 aa10.91□□□□□ -0.66
Trim40-203ENSMUST00000172711 Jarid2Q62315 1234 aa10.91□□□□□ -0.66
Trim40-203ENSMUST00000172711 VwdeQ6DFV8 926 aa10.91□□□□□ -0.66
Trim40-203ENSMUST00000172711 PigbQ9JJQ0 542 aa10.91□□□□□ -0.66
Trim40-203ENSMUST00000172711 Gja5Q01231 358 aa10.9□□□□□ -0.66
Trim40-203ENSMUST00000172711 Q8C6G1 249 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms