RNA–Protein interactions for RNA: ENSMUST00000162244.7

Cpsf4-207, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-207ENSMUST00000162244 Usp16Q99LG0 825 aa22.42■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Shank3Q4ACU6 1730 aa22.42■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Eif4a1P60843 406 aaKnown RBP22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Nop58Q6DFW4 536 aaKnown RBP22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Ofd1Q80Z25 1017 aa22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 DiexfQ8BTT6 772 aaKnown RBP22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Ccdc30Q8BVF4 654 aa22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Pcgf6Q99NA9 353 aa22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Myo5bP21271 1818 aa22.41■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Rbm25B2RY56 838 aaKnown RBP22.4■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Mylk2Q8VCR8 613 aa22.4■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Klhdc4Q921I2 584 aa22.4■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Col1a2Q01149 1372 aa22.4■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 1700019A02RikA0A087WPV9 146 aa22.39■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Smarcc1P97496 1104 aa22.39■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Cnnm1Q0GA42 951 aa22.39■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Iqsec3Q3TES0 1195 aa22.39■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Q3TQI7 289 aaKnown RBP22.39■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Ric1Q69ZJ7 1422 aa22.39■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 CoblQ5NBX1 1337 aaKnown RBP22.39■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Igsf1Q7TQA1 1317 aa22.39■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Pibf1E9Q6K3 756 aa22.38■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Taf7Q9R1C0 341 aa22.38■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Ankrd50F7BE84 1390 aa22.38■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Ttc21aQ8C0S4 1314 aa22.38■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Zfp444Q3TDV8 331 aaKnown RBP22.38■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Ksr2Q3UVC0 959 aa22.37■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Senp3Q9EP97 568 aaKnown RBP22.37■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 PigbQ9JJQ0 542 aa22.37■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 NppbP40753 121 aa22.36■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Ezh2Q61188 746 aaKnown RBP22.36■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 PsapQ61207 557 aaKnown RBP22.36■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Miga2Q8BK03 593 aa22.36■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 GckrQ91X44 587 aa22.36■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Tiam2Q6ZPF3 1715 aa22.35■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Tnnt1O88346 262 aa22.35■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Msh6P54276 1358 aaKnown RBP22.34■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Chpf2Q3UU43 768 aa22.33■■□□□ 1.17
Cpsf4-207ENSMUST00000162244 Gm13023A2A8N2 498 aa22.32■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 MeiocA2AG06 965 aa22.32■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Atf5O70191 283 aa22.32■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Fam198bQ3UPI1 517 aa22.32■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Gm12185Q5NCB2 835 aa22.32■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Prr29B1ARI9 187 aa22.31■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Kif23E9Q5G3 953 aa22.31■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Lrrc43Q3V0L5 667 aa22.31■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Ccar1Q8CH18 1146 aaKnown RBP22.31■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Fkbp4P30416 458 aa22.3■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Morc2aQ69ZX6 1030 aa22.3■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Tmem119Q8R138 280 aa22.3■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Akt1s1Q9D1F4 257 aa22.3■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 CastP51125 788 aa22.29■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Cyp2d12Q8BVD2 504 aa22.29■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Jdp2P97875 163 aa22.28■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Ccdc85cE9Q6B2 420 aa22.27■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Prkab2Q6PAM0 271 aa22.27■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Nip7Q9CXK8 180 aaKnown RBP22.27■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 MetP16056 1379 aa22.27■■□□□ 1.16
Cpsf4-207ENSMUST00000162244 Bcl2l13P59017 434 aa22.26■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 RtcbQ99LF4 505 aaKnown RBP22.26■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Syde2E9PUP1 1314 aa22.26■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Erbb4Q61527 1308 aa22.26■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Nav1Q8CH77 1875 aa22.26■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Pdia6Q922R8 440 aaKnown RBP22.25■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Zfyve9A2A8R0 1397 aa22.25■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Kndc1Q0KK55 1742 aa22.25■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Gm6268A2A3U9 297 aa22.24■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 SympkQ80X82 1284 aa22.24■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Gigyf1Q99MR1 1044 aaKnown RBP22.24■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Rapgef4Q9EQZ6 1011 aa22.24■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Ccdc171E9Q1U1 1324 aa22.23■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Plekhh1Q80TI1 1356 aa22.23■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Trim26Q99PN3 545 aa22.23■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Vamp4O70480 141 aa22.22■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Clcn1Q64347 994 aa22.22■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Zbtb1Q91VL9 713 aa22.22■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Kank1E9Q238 1360 aa22.21■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Spata31d1bE9QA57 1361 aa22.21■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Cnksr1A2A9K7 700 aa22.21■■□□□ 1.15
Cpsf4-207ENSMUST00000162244 Gas2l2Q5SSG4 860 aa22.2■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Gnl3lQ6PGG6 577 aaKnown RBP22.2■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Ccdc60Q8C4J0 545 aa22.19■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Polr3glQ8R0C0 218 aa22.19■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 HmcesQ8R1M0 353 aaKnown RBP22.19■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 VirmaA2AIV2 1811 aaKnown RBP22.19■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Slc39a6Q8C145 765 aa22.18■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Trim52Q8CDV4 233 aa22.18■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Trpc5Q9QX29 975 aa22.18■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 IncenpQ9WU62 880 aa22.17■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Amhr2Q8K592 568 aa22.16■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 KarsQ99MN1 595 aaKnown RBP22.16■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Ankle2Q6P1H6 964 aa22.15■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Sv2bQ8BG39 683 aa22.15■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Gpr150Q8BL07 427 aa22.15■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Sumf1Q8R0F3 372 aa22.15■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Prr5lA2AVJ5 370 aa22.14■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Chl1P70232 1209 aa22.14■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 G3bp1P97855 465 aaKnown RBP22.14■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Nsfl1cQ9CZ44 370 aaKnown RBP22.14■■□□□ 1.14
Cpsf4-207ENSMUST00000162244 Cavin2Q63918 418 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms