RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Elf1Q60775 612 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Odf2lQ9D478 642 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Pole3Q9JKP7 145 aa10.51□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Rwdd1Q9CQK7 243 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ap1m1P35585 423 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Cep135Q6P5D4 1140 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Zbtb46Q8BID6 600 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Prkg1P0C605 671 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Sept2P42208 361 aaKnown RBP10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Larp1Q6ZQ58 1072 aaKnown RBP10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 IqcgQ80W32 419 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ccdc17Q8CE13 565 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Snrnp27Q8K194 155 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 1700018F24RikB2RW27 314 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ppm1eQ80TL0 749 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Q8VDP2 222 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Cep89Q9CZX2 791 aa10.5□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Becn1O88597 448 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Lig1P37913 916 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Vps37aQ8CHS8 397 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Gm44G3UW88 330 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Abl1P00520 1123 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Q3TQI7 289 aaKnown RBP10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ctdp1Q7TSG2 960 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Robo4Q8C310 1012 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Tsc1Q9EP53 1161 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Fmnl2A2APV2 1086 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Rnf214Q8BFU3 668 aaKnown RBP10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Lemd3Q9WU40 921 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Smyd5Q3TYX3 416 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 LnpkQ7TQ95 425 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ttc19Q8CC21 365 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Trim37Q6PCX9 961 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Rab11fip4Q8BQP8 635 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 SnrkQ8VDU5 748 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Zeb2Q9R0G7 1215 aa10.49□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Brpf3B2KF05 1204 aaKnown RBP10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Fam13aQ8BGI4 693 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ano9P86044 747 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Gse1Q3U3C9 1213 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Zbtb16Q3UQ17 673 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Znf513Q6PD29 541 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ticam2Q8BJQ4 232 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Tceal1Q921P9 165 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Mrpl40Q9Z2Q5 206 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Gja8P28236 440 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 SrlQ7TQ48 910 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ofd1Q80Z25 1017 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Fbxl5Q8C2S5 690 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Hgh1Q8C3I8 393 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ccdc73Q8CDM4 1066 aa10.48□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Polr2fP61219 127 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 E330021D16RikQ8BW45 371 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 LrgukQ9D5S7 820 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Sel1lQ9Z2G6 790 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ttll6A4Q9E8 822 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Cdk5rap3Q99LM2 503 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 SarnpQ9D1J3 210 aaKnown RBP10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Rbm46P86049 533 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 PicalmQ7M6Y3 660 aaKnown RBP10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Ccdc94Q9D6J3 314 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Speer4dL7N216 212 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 ChgbP16014 677 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Cdca8Q8BHX3 289 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Iffo1Q8BXL9 562 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Msantd4Q91YU3 345 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Iws1Q8C1D8 766 aa10.47□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Bin2D3Z6Q9 489 aa10.46□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Clec11aO88200 328 aa10.46□□□□□ -0.73
Clcn3-202ENSMUST00000056508 CpeQ00493 476 aa10.46□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Znf697Q569E7 569 aa10.46□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Kiaa1524Q8BWY9 907 aa10.46□□□□□ -0.73
Clcn3-202ENSMUST00000056508 SltmQ8CH25 1031 aaKnown RBP10.46□□□□□ -0.73
Clcn3-202ENSMUST00000056508 Gucy2dA0A0U1RPR8 1117 aa10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 TbcaP48428 108 aaKnown RBP10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 MlecQ6ZQI3 291 aaKnown RBP10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Tsr2Q8C8T8 191 aa10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Mllt3A2AM29 569 aa10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Map3k7clP58500 142 aa10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rsrc1Q9DBU6 334 aa10.46□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Tpm1P58771 284 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Stk11ipQ3TAA7 1072 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Specc1Q5SXY1 1067 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Osbpl2Q8BX94 484 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Champ1Q8K327 802 aaKnown RBP10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rmi1Q9D4G9 616 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 1700017N19RikA0A087WPJ1 469 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Fam160a1Q505K2 1081 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Abcb7Q61102 752 aaKnown RBP10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ppp1r37Q8BKR5 712 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ankrd24Q80VM7 985 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rmdn2Q8BSE0 410 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Cplx3Q8R1B5 158 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Ppp2r5eQ61151 467 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 CrebzfQ91ZR3 358 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Cep83Q9D5R3 692 aa10.45□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rfx8D3YU81 596 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Rabl2E9Q9D5 223 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Golga2Q921M4 999 aa10.44□□□□□ -0.74
Clcn3-202ENSMUST00000056508 Zkscan5Q9Z1D8 819 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 861.6 ms