Protein–RNA interactions for Protein: Q8VI38

Gbgt1, Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, mousemouse

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbgt1Q8VI38 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Gbgt1Q8VI38 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Gbgt1Q8VI38 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Gbgt1Q8VI38 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Gbgt1Q8VI38 Psd-208ENSMUST00000224556 2034 ntBASIC29.37■■■□□ 2.29
Gbgt1Q8VI38 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Gbgt1Q8VI38 Gm25239-201ENSMUST00000174915 86 ntBASIC28.58■■■□□ 2.17
Gbgt1Q8VI38 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.08
Gbgt1Q8VI38 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Gbgt1Q8VI38 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Gbgt1Q8VI38 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Gbgt1Q8VI38 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Gbgt1Q8VI38 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Gbgt1Q8VI38 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Gbgt1Q8VI38 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.52■■■□□ 2
Gbgt1Q8VI38 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Gbgt1Q8VI38 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gbgt1Q8VI38 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Gbgt1Q8VI38 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Gbgt1Q8VI38 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Gbgt1Q8VI38 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.82■■□□□ 1.88
Gbgt1Q8VI38 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Gbgt1Q8VI38 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Gbgt1Q8VI38 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Gbgt1Q8VI38 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Gbgt1Q8VI38 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Gbgt1Q8VI38 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.64■■□□□ 1.85
Gbgt1Q8VI38 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Gbgt1Q8VI38 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Gbgt1Q8VI38 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.55■■□□□ 1.84
Gbgt1Q8VI38 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.55■■□□□ 1.84
Gbgt1Q8VI38 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Gbgt1Q8VI38 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Gbgt1Q8VI38 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Gbgt1Q8VI38 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Gbgt1Q8VI38 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.07■■□□□ 1.76
Gbgt1Q8VI38 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Gbgt1Q8VI38 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Gbgt1Q8VI38 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Gbgt1Q8VI38 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
Gbgt1Q8VI38 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Gbgt1Q8VI38 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.92■■□□□ 1.74
Gbgt1Q8VI38 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Gbgt1Q8VI38 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Gbgt1Q8VI38 Gm15042-201ENSMUST00000120212 883 ntBASIC25.85■■□□□ 1.73
Gbgt1Q8VI38 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.84■■□□□ 1.73
Gbgt1Q8VI38 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gbgt1Q8VI38 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Gbgt1Q8VI38 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Gbgt1Q8VI38 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Gbgt1Q8VI38 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Gbgt1Q8VI38 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Gbgt1Q8VI38 Gm15045-201ENSMUST00000117359 883 ntBASIC25.52■■□□□ 1.68
Gbgt1Q8VI38 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gbgt1Q8VI38 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Gbgt1Q8VI38 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gbgt1Q8VI38 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.47■■□□□ 1.67
Gbgt1Q8VI38 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gbgt1Q8VI38 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gbgt1Q8VI38 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Gbgt1Q8VI38 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Gbgt1Q8VI38 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Gbgt1Q8VI38 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Gbgt1Q8VI38 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gbgt1Q8VI38 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Gbgt1Q8VI38 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Gbgt1Q8VI38 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gbgt1Q8VI38 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Gbgt1Q8VI38 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.17■■□□□ 1.62
Gbgt1Q8VI38 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Gbgt1Q8VI38 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Gbgt1Q8VI38 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Gbgt1Q8VI38 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.09■■□□□ 1.61
Gbgt1Q8VI38 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gbgt1Q8VI38 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Gbgt1Q8VI38 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.06■■□□□ 1.6
Gbgt1Q8VI38 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Gbgt1Q8VI38 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.01■■□□□ 1.59
Gbgt1Q8VI38 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Gbgt1Q8VI38 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Gbgt1Q8VI38 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Gbgt1Q8VI38 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Gbgt1Q8VI38 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Gbgt1Q8VI38 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Gbgt1Q8VI38 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gbgt1Q8VI38 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Gbgt1Q8VI38 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Gbgt1Q8VI38 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Gbgt1Q8VI38 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gbgt1Q8VI38 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gbgt1Q8VI38 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Gbgt1Q8VI38 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gbgt1Q8VI38 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Gbgt1Q8VI38 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gbgt1Q8VI38 Gm24109-201ENSMUST00000175489 103 ntBASIC24.52■■□□□ 1.52
Gbgt1Q8VI38 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Gbgt1Q8VI38 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gbgt1Q8VI38 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.41■■□□□ 1.5
Gbgt1Q8VI38 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
Gbgt1Q8VI38 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms