Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Vmn1r228Q8R2A7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Vmn1r228Q8R2A7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Vmn1r228Q8R2A7 Psd-208ENSMUST00000224556 2034 ntBASIC28.23■■■□□ 2.11
Vmn1r228Q8R2A7 Gm25239-201ENSMUST00000174915 86 ntBASIC28.19■■■□□ 2.1
Vmn1r228Q8R2A7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vmn1r228Q8R2A7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Vmn1r228Q8R2A7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vmn1r228Q8R2A7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Vmn1r228Q8R2A7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Vmn1r228Q8R2A7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Vmn1r228Q8R2A7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Vmn1r228Q8R2A7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Vmn1r228Q8R2A7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Vmn1r228Q8R2A7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Vmn1r228Q8R2A7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Vmn1r228Q8R2A7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Vmn1r228Q8R2A7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.24■■□□□ 1.79
Vmn1r228Q8R2A7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Vmn1r228Q8R2A7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vmn1r228Q8R2A7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Vmn1r228Q8R2A7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Vmn1r228Q8R2A7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vmn1r228Q8R2A7 Gm15042-201ENSMUST00000120212 883 ntBASIC25.74■■□□□ 1.71
Vmn1r228Q8R2A7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.67■■□□□ 1.7
Vmn1r228Q8R2A7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vmn1r228Q8R2A7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Vmn1r228Q8R2A7 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.45■■□□□ 1.66
Vmn1r228Q8R2A7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.38■■□□□ 1.65
Vmn1r228Q8R2A7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.38■■□□□ 1.65
Vmn1r228Q8R2A7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Vmn1r228Q8R2A7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Vmn1r228Q8R2A7 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.37■■□□□ 1.65
Vmn1r228Q8R2A7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vmn1r228Q8R2A7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Vmn1r228Q8R2A7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.35■■□□□ 1.65
Vmn1r228Q8R2A7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Vmn1r228Q8R2A7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vmn1r228Q8R2A7 Gm15045-201ENSMUST00000117359 883 ntBASIC25.32■■□□□ 1.64
Vmn1r228Q8R2A7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Vmn1r228Q8R2A7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vmn1r228Q8R2A7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Vmn1r228Q8R2A7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vmn1r228Q8R2A7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r228Q8R2A7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vmn1r228Q8R2A7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Vmn1r228Q8R2A7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vmn1r228Q8R2A7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Vmn1r228Q8R2A7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.98■■□□□ 1.59
Vmn1r228Q8R2A7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vmn1r228Q8R2A7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Vmn1r228Q8R2A7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Vmn1r228Q8R2A7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vmn1r228Q8R2A7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r228Q8R2A7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Vmn1r228Q8R2A7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vmn1r228Q8R2A7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r228Q8R2A7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Vmn1r228Q8R2A7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r228Q8R2A7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Vmn1r228Q8R2A7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
Vmn1r228Q8R2A7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r228Q8R2A7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vmn1r228Q8R2A7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Vmn1r228Q8R2A7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.43■■□□□ 1.5
Vmn1r228Q8R2A7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vmn1r228Q8R2A7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vmn1r228Q8R2A7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r228Q8R2A7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vmn1r228Q8R2A7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vmn1r228Q8R2A7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vmn1r228Q8R2A7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vmn1r228Q8R2A7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Vmn1r228Q8R2A7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r228Q8R2A7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Vmn1r228Q8R2A7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.14■■□□□ 1.45
Vmn1r228Q8R2A7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r228Q8R2A7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r228Q8R2A7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r228Q8R2A7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vmn1r228Q8R2A7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Vmn1r228Q8R2A7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Vmn1r228Q8R2A7 Gm24109-201ENSMUST00000175489 103 ntBASIC23.91■■□□□ 1.42
Vmn1r228Q8R2A7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vmn1r228Q8R2A7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vmn1r228Q8R2A7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vmn1r228Q8R2A7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vmn1r228Q8R2A7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r228Q8R2A7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r228Q8R2A7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Vmn1r228Q8R2A7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r228Q8R2A7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r228Q8R2A7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vmn1r228Q8R2A7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Vmn1r228Q8R2A7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.73■■□□□ 1.39
Vmn1r228Q8R2A7 Gm23366-201ENSMUST00000175022 89 ntBASIC23.73■■□□□ 1.39
Vmn1r228Q8R2A7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vmn1r228Q8R2A7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Vmn1r228Q8R2A7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vmn1r228Q8R2A7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms