Protein–RNA interactions for Protein: Q8C4L8

C130073F10Rik, RIKEN cDNA C130073F10 gene, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C130073F10RikQ8C4L8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
C130073F10RikQ8C4L8 Gm25239-201ENSMUST00000174915 86 ntBASIC25.88■■□□□ 1.73
C130073F10RikQ8C4L8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
C130073F10RikQ8C4L8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
C130073F10RikQ8C4L8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
C130073F10RikQ8C4L8 Psd-208ENSMUST00000224556 2034 ntBASIC25.06■■□□□ 1.6
C130073F10RikQ8C4L8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
C130073F10RikQ8C4L8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
C130073F10RikQ8C4L8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
C130073F10RikQ8C4L8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
C130073F10RikQ8C4L8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
C130073F10RikQ8C4L8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
C130073F10RikQ8C4L8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
C130073F10RikQ8C4L8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
C130073F10RikQ8C4L8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
C130073F10RikQ8C4L8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
C130073F10RikQ8C4L8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
C130073F10RikQ8C4L8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
C130073F10RikQ8C4L8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
C130073F10RikQ8C4L8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
C130073F10RikQ8C4L8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.31■■□□□ 1.32
C130073F10RikQ8C4L8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
C130073F10RikQ8C4L8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
C130073F10RikQ8C4L8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
C130073F10RikQ8C4L8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
C130073F10RikQ8C4L8 Gm15042-201ENSMUST00000120212 883 ntBASIC22.95■■□□□ 1.26
C130073F10RikQ8C4L8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
C130073F10RikQ8C4L8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
C130073F10RikQ8C4L8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
C130073F10RikQ8C4L8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.75■■□□□ 1.23
C130073F10RikQ8C4L8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.72■■□□□ 1.23
C130073F10RikQ8C4L8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
C130073F10RikQ8C4L8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
C130073F10RikQ8C4L8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
C130073F10RikQ8C4L8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
C130073F10RikQ8C4L8 Gm15045-201ENSMUST00000117359 883 ntBASIC22.57■■□□□ 1.2
C130073F10RikQ8C4L8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
C130073F10RikQ8C4L8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
C130073F10RikQ8C4L8 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.54■■□□□ 1.2
C130073F10RikQ8C4L8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
C130073F10RikQ8C4L8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
C130073F10RikQ8C4L8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
C130073F10RikQ8C4L8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.47■■□□□ 1.19
C130073F10RikQ8C4L8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.46■■□□□ 1.19
C130073F10RikQ8C4L8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
C130073F10RikQ8C4L8 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.43■■□□□ 1.18
C130073F10RikQ8C4L8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C130073F10RikQ8C4L8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
C130073F10RikQ8C4L8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C130073F10RikQ8C4L8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C130073F10RikQ8C4L8 Gm24109-201ENSMUST00000175489 103 ntBASIC22.27■■□□□ 1.16
C130073F10RikQ8C4L8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C130073F10RikQ8C4L8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
C130073F10RikQ8C4L8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
C130073F10RikQ8C4L8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
C130073F10RikQ8C4L8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.06■■□□□ 1.12
C130073F10RikQ8C4L8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C130073F10RikQ8C4L8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
C130073F10RikQ8C4L8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
C130073F10RikQ8C4L8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
C130073F10RikQ8C4L8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
C130073F10RikQ8C4L8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C130073F10RikQ8C4L8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
C130073F10RikQ8C4L8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
C130073F10RikQ8C4L8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C130073F10RikQ8C4L8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C130073F10RikQ8C4L8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
C130073F10RikQ8C4L8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
C130073F10RikQ8C4L8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C130073F10RikQ8C4L8 Gm23366-201ENSMUST00000175022 89 ntBASIC21.75■■□□□ 1.07
C130073F10RikQ8C4L8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C130073F10RikQ8C4L8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.7■■□□□ 1.06
C130073F10RikQ8C4L8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
C130073F10RikQ8C4L8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
C130073F10RikQ8C4L8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C130073F10RikQ8C4L8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
C130073F10RikQ8C4L8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
C130073F10RikQ8C4L8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
C130073F10RikQ8C4L8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
C130073F10RikQ8C4L8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C130073F10RikQ8C4L8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C130073F10RikQ8C4L8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
C130073F10RikQ8C4L8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C130073F10RikQ8C4L8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
C130073F10RikQ8C4L8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
C130073F10RikQ8C4L8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C130073F10RikQ8C4L8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C130073F10RikQ8C4L8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
C130073F10RikQ8C4L8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.39■■□□□ 1.01
C130073F10RikQ8C4L8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C130073F10RikQ8C4L8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
C130073F10RikQ8C4L8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.34■■□□□ 1.01
C130073F10RikQ8C4L8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C130073F10RikQ8C4L8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.32■■□□□ 1
C130073F10RikQ8C4L8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
C130073F10RikQ8C4L8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
C130073F10RikQ8C4L8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C130073F10RikQ8C4L8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C130073F10RikQ8C4L8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
C130073F10RikQ8C4L8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms