Protein–RNA interactions for Protein: Q80ZR8

1700001J03Rik, RIKEN cDNA 1700001J03, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700001J03RikQ80ZR8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
1700001J03RikQ80ZR8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
1700001J03RikQ80ZR8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
1700001J03RikQ80ZR8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
1700001J03RikQ80ZR8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
1700001J03RikQ80ZR8 Psd-208ENSMUST00000224556 2034 ntBASIC28.83■■■□□ 2.21
1700001J03RikQ80ZR8 Gm25239-201ENSMUST00000174915 86 ntBASIC28.59■■■□□ 2.17
1700001J03RikQ80ZR8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
1700001J03RikQ80ZR8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
1700001J03RikQ80ZR8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
1700001J03RikQ80ZR8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
1700001J03RikQ80ZR8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
1700001J03RikQ80ZR8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
1700001J03RikQ80ZR8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
1700001J03RikQ80ZR8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
1700001J03RikQ80ZR8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
1700001J03RikQ80ZR8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
1700001J03RikQ80ZR8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
1700001J03RikQ80ZR8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
1700001J03RikQ80ZR8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
1700001J03RikQ80ZR8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
1700001J03RikQ80ZR8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
1700001J03RikQ80ZR8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
1700001J03RikQ80ZR8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
1700001J03RikQ80ZR8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.3■■□□□ 1.8
1700001J03RikQ80ZR8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
1700001J03RikQ80ZR8 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.22■■□□□ 1.79
1700001J03RikQ80ZR8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.2■■□□□ 1.79
1700001J03RikQ80ZR8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
1700001J03RikQ80ZR8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
1700001J03RikQ80ZR8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
1700001J03RikQ80ZR8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
1700001J03RikQ80ZR8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.04■■□□□ 1.76
1700001J03RikQ80ZR8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
1700001J03RikQ80ZR8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
1700001J03RikQ80ZR8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
1700001J03RikQ80ZR8 Gm15042-201ENSMUST00000120212 883 ntBASIC25.82■■□□□ 1.72
1700001J03RikQ80ZR8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
1700001J03RikQ80ZR8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
1700001J03RikQ80ZR8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
1700001J03RikQ80ZR8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
1700001J03RikQ80ZR8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
1700001J03RikQ80ZR8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
1700001J03RikQ80ZR8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
1700001J03RikQ80ZR8 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.53■■□□□ 1.68
1700001J03RikQ80ZR8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
1700001J03RikQ80ZR8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
1700001J03RikQ80ZR8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
1700001J03RikQ80ZR8 Gm15045-201ENSMUST00000117359 883 ntBASIC25.36■■□□□ 1.65
1700001J03RikQ80ZR8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
1700001J03RikQ80ZR8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.3■■□□□ 1.64
1700001J03RikQ80ZR8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
1700001J03RikQ80ZR8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
1700001J03RikQ80ZR8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.16■■□□□ 1.62
1700001J03RikQ80ZR8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
1700001J03RikQ80ZR8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
1700001J03RikQ80ZR8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
1700001J03RikQ80ZR8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
1700001J03RikQ80ZR8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
1700001J03RikQ80ZR8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
1700001J03RikQ80ZR8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
1700001J03RikQ80ZR8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
1700001J03RikQ80ZR8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
1700001J03RikQ80ZR8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.98■■□□□ 1.59
1700001J03RikQ80ZR8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
1700001J03RikQ80ZR8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
1700001J03RikQ80ZR8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
1700001J03RikQ80ZR8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
1700001J03RikQ80ZR8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
1700001J03RikQ80ZR8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
1700001J03RikQ80ZR8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
1700001J03RikQ80ZR8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.84■■□□□ 1.57
1700001J03RikQ80ZR8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
1700001J03RikQ80ZR8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.83■■□□□ 1.57
1700001J03RikQ80ZR8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
1700001J03RikQ80ZR8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
1700001J03RikQ80ZR8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
1700001J03RikQ80ZR8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
1700001J03RikQ80ZR8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
1700001J03RikQ80ZR8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
1700001J03RikQ80ZR8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.72■■□□□ 1.55
1700001J03RikQ80ZR8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
1700001J03RikQ80ZR8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
1700001J03RikQ80ZR8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
1700001J03RikQ80ZR8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.55■■□□□ 1.52
1700001J03RikQ80ZR8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
1700001J03RikQ80ZR8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
1700001J03RikQ80ZR8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
1700001J03RikQ80ZR8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
1700001J03RikQ80ZR8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
1700001J03RikQ80ZR8 Gm24109-201ENSMUST00000175489 103 ntBASIC24.39■■□□□ 1.49
1700001J03RikQ80ZR8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
1700001J03RikQ80ZR8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
1700001J03RikQ80ZR8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
1700001J03RikQ80ZR8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.33■■□□□ 1.49
1700001J03RikQ80ZR8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
1700001J03RikQ80ZR8 Zxda-201ENSMUST00000117281 2621 ntBASIC24.31■■□□□ 1.48
1700001J03RikQ80ZR8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
1700001J03RikQ80ZR8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
1700001J03RikQ80ZR8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms