Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 SNORD116-17-201ENST00000383929 92 ntBASIC-2.26□□□□□ -2.77
COL6A3P12111 SNORD116-15-201ENST00000384445 92 ntBASIC-2.26□□□□□ -2.77
COL6A3P12111 SNORD116-19-201ENST00000384729 92 ntBASIC-2.26□□□□□ -2.77
COL6A3P12111 AC008267.6-201ENST00000441664 139 ntBASIC-2.26□□□□□ -2.77
COL6A3P12111 RNU6-463P-201ENST00000384340 107 ntBASIC-2.27□□□□□ -2.77
COL6A3P12111 RNU6-81P-201ENST00000365608 104 ntBASIC-2.27□□□□□ -2.77
COL6A3P12111 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.27□□□□□ -2.77
COL6A3P12111 U6.111-201ENST00000636093 83 ntBASIC-2.27□□□□□ -2.77
COL6A3P12111 MIR488-201ENST00000365739 83 ntBASIC-2.28□□□□□ -2.77
COL6A3P12111 MIR1302-3-201ENST00000408128 138 ntBASIC-2.28□□□□□ -2.77
COL6A3P12111 MTCYBP9-201ENST00000431021 303 ntBASIC-2.28□□□□□ -2.78
COL6A3P12111 RNU6-640P-201ENST00000363693 105 ntBASIC-2.29□□□□□ -2.78
COL6A3P12111 RNU6-49P-201ENST00000384256 107 ntBASIC-2.29□□□□□ -2.78
COL6A3P12111 RNY4P30-201ENST00000410216 95 ntBASIC-2.29□□□□□ -2.78
COL6A3P12111 RNU6-820P-201ENST00000384273 107 ntBASIC-2.3□□□□□ -2.78
COL6A3P12111 MIR568-201ENST00000385036 95 ntBASIC-2.3□□□□□ -2.78
COL6A3P12111 RNU6-346P-201ENST00000516288 111 ntBASIC-2.3□□□□□ -2.78
COL6A3P12111 RNU6-886P-201ENST00000384319 105 ntBASIC-2.31□□□□□ -2.78
COL6A3P12111 RNU6-388P-201ENST00000517012 105 ntBASIC-2.31□□□□□ -2.78
COL6A3P12111 RNU6-389P-201ENST00000517048 105 ntBASIC-2.31□□□□□ -2.78
COL6A3P12111 RNU6-294P-201ENST00000364999 102 ntBASIC-2.31□□□□□ -2.78
COL6A3P12111 RNU6-753P-201ENST00000363926 107 ntBASIC-2.32□□□□□ -2.78
COL6A3P12111 MIR606-201ENST00000384851 96 ntBASIC-2.32□□□□□ -2.78
COL6A3P12111 RNU6-32P-201ENST00000383948 107 ntBASIC-2.33□□□□□ -2.78
COL6A3P12111 RNU6-13P-201ENST00000384248 107 ntBASIC-2.33□□□□□ -2.78
COL6A3P12111 RNU6-12P-201ENST00000384604 107 ntBASIC-2.33□□□□□ -2.78
COL6A3P12111 RNU6-41P-201ENST00000384741 107 ntBASIC-2.33□□□□□ -2.78
COL6A3P12111 MIR4760-201ENST00000585040 80 ntBASIC-2.33□□□□□ -2.78
COL6A3P12111 SNORA26.2-201ENST00000390922 122 ntBASIC-2.34□□□□□ -2.78
COL6A3P12111 RNU6-153P-201ENST00000364422 104 ntBASIC-2.36□□□□□ -2.79
COL6A3P12111 RNU6-485P-201ENST00000363475 107 ntBASIC-2.37□□□□□ -2.79
COL6A3P12111 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.37□□□□□ -2.79
COL6A3P12111 MIR1255A-201ENST00000408338 113 ntBASIC-2.37□□□□□ -2.79
COL6A3P12111 RNU6-22P-201ENST00000384355 107 ntBASIC-2.38□□□□□ -2.79
COL6A3P12111 RNU6-147P-201ENST00000383983 107 ntBASIC-2.38□□□□□ -2.79
COL6A3P12111 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.38□□□□□ -2.79
COL6A3P12111 RNU6-1091P-201ENST00000363945 107 ntBASIC-2.39□□□□□ -2.79
COL6A3P12111 MTCYBP6-201ENST00000441810 138 ntBASIC-2.39□□□□□ -2.79
COL6A3P12111 AL365222.1-201ENST00000614661 98 ntBASIC-2.39□□□□□ -2.79
COL6A3P12111 RNY1P5-201ENST00000383890 115 ntBASIC-2.39□□□□□ -2.79
COL6A3P12111 RNU6-894P-201ENST00000517094 105 ntBASIC-2.39□□□□□ -2.79
COL6A3P12111 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.4□□□□□ -2.79
COL6A3P12111 MT-TG-201ENST00000387429 68 ntBASIC-2.4□□□□□ -2.79
COL6A3P12111 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.41□□□□□ -2.8
COL6A3P12111 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.41□□□□□ -2.8
COL6A3P12111 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.41□□□□□ -2.8
COL6A3P12111 RNU6-930P-201ENST00000390938 100 ntBASIC-2.41□□□□□ -2.8
COL6A3P12111 MIR548S-201ENST00000581352 82 ntBASIC-2.42□□□□□ -2.8
COL6A3P12111 MIR548F3-201ENST00000408509 87 ntBASIC-2.42□□□□□ -2.8
COL6A3P12111 SNORD111B-201ENST00000408587 80 ntBASIC-2.42□□□□□ -2.8
COL6A3P12111 AP000770.2-201ENST00000623694 100 ntBASIC-2.43□□□□□ -2.8
COL6A3P12111 AC026407.1-201ENST00000518369 204 ntBASIC-2.43□□□□□ -2.8
COL6A3P12111 MIR450A2-201ENST00000385022 100 ntBASIC-2.44□□□□□ -2.8
COL6A3P12111 MIR4503-201ENST00000582187 83 ntBASIC-2.44□□□□□ -2.8
COL6A3P12111 RNU6-738P-201ENST00000384531 106 ntBASIC-2.45□□□□□ -2.8
COL6A3P12111 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.45□□□□□ -2.8
COL6A3P12111 U6.103-201ENST00000637085 61 ntBASIC-2.45□□□□□ -2.8
COL6A3P12111 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.45□□□□□ -2.8
COL6A3P12111 RNU6-936P-201ENST00000384005 107 ntBASIC-2.46□□□□□ -2.8
COL6A3P12111 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.46□□□□□ -2.8
COL6A3P12111 MIR4662A-201ENST00000637499 67 ntBASIC-2.46□□□□□ -2.8
COL6A3P12111 RNU6-857P-201ENST00000515893 110 ntBASIC-2.47□□□□□ -2.8
COL6A3P12111 RNU6-499P-201ENST00000365615 107 ntBASIC-2.47□□□□□ -2.81
COL6A3P12111 MIR3202-2-201ENST00000635980 79 ntBASIC-2.47□□□□□ -2.81
COL6A3P12111 RNU6-919P-201ENST00000516731 104 ntBASIC-2.48□□□□□ -2.81
COL6A3P12111 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.48□□□□□ -2.81
COL6A3P12111 RNU6-892P-201ENST00000410335 99 ntBASIC-2.48□□□□□ -2.81
COL6A3P12111 RNU6-614P-201ENST00000384369 107 ntBASIC-2.49□□□□□ -2.81
COL6A3P12111 U6.59-201ENST00000615686 107 ntBASIC-2.49□□□□□ -2.81
COL6A3P12111 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.49□□□□□ -2.81
COL6A3P12111 RNU6-573P-201ENST00000383938 106 ntBASIC-2.49□□□□□ -2.81
COL6A3P12111 RNU6-279P-201ENST00000391297 101 ntBASIC-2.5□□□□□ -2.81
COL6A3P12111 RNU6-133P-201ENST00000383989 107 ntBASIC-2.5□□□□□ -2.81
COL6A3P12111 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.51□□□□□ -2.81
COL6A3P12111 RNA5SP89-201ENST00000410300 108 ntBASIC-2.51□□□□□ -2.81
COL6A3P12111 SNORD78.1-201ENST00000390866 65 ntBASIC-2.52□□□□□ -2.81
COL6A3P12111 AC079150.2-201ENST00000443733 78 ntBASIC-2.52□□□□□ -2.81
COL6A3P12111 RNU6-406P-201ENST00000516470 107 ntBASIC-2.53□□□□□ -2.81
COL6A3P12111 MIR3908-201ENST00000579798 126 ntBASIC-2.53□□□□□ -2.81
COL6A3P12111 MIR3671-201ENST00000580455 88 ntBASIC-2.54□□□□□ -2.82
COL6A3P12111 MIR633-201ENST00000384821 98 ntBASIC-2.55□□□□□ -2.82
COL6A3P12111 SNORD20-201ENST00000384550 80 ntBASIC-2.55□□□□□ -2.82
COL6A3P12111 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.55□□□□□ -2.82
COL6A3P12111 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.57□□□□□ -2.82
COL6A3P12111 RNU6-327P-201ENST00000516270 127 ntBASIC-2.57□□□□□ -2.82
COL6A3P12111 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.57□□□□□ -2.82
COL6A3P12111 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.57□□□□□ -2.82
COL6A3P12111 RNA5SP225-201ENST00000410874 135 ntBASIC-2.59□□□□□ -2.82
COL6A3P12111 RNU6-313P-201ENST00000516317 112 ntBASIC-2.59□□□□□ -2.82
COL6A3P12111 MIR3133-201ENST00000583157 78 ntBASIC-2.6□□□□□ -2.83
COL6A3P12111 AC125388.1-201ENST00000459631 156 ntBASIC-2.62□□□□□ -2.83
COL6A3P12111 RNU6-44P-201ENST00000384045 107 ntBASIC-2.62□□□□□ -2.83
COL6A3P12111 MIR5582-201ENST00000579697 68 ntBASIC-2.63□□□□□ -2.83
COL6A3P12111 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.63□□□□□ -2.83
COL6A3P12111 RNU6-215P-201ENST00000365169 102 ntBASIC-2.65□□□□□ -2.83
COL6A3P12111 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.66□□□□□ -2.84
COL6A3P12111 SNORD73B-201ENST00000364394 72 ntBASIC-2.69□□□□□ -2.84
COL6A3P12111 AL606753.1-201ENST00000427435 87 ntBASIC-2.7□□□□□ -2.84
COL6A3P12111 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.7□□□□□ -2.84
COL6A3P12111 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms