Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-49P-201ENST00000384256 107 ntBASIC-9.51□□□□□ -3.93
TOP2AP11388 AC079150.2-201ENST00000443733 78 ntBASIC-9.51□□□□□ -3.93
TOP2AP11388 Y_RNA.356-201ENST00000365475 113 ntBASIC-9.51□□□□□ -3.93
TOP2AP11388 AC008267.6-201ENST00000441664 139 ntBASIC-9.51□□□□□ -3.93
TOP2AP11388 AC134503.1-201ENST00000633048 54 ntBASIC-9.51□□□□□ -3.93
TOP2AP11388 RNU6-1131P-201ENST00000364955 107 ntBASIC-9.52□□□□□ -3.93
TOP2AP11388 AC062037.2-201ENST00000610137 73 ntBASIC-9.54□□□□□ -3.94
TOP2AP11388 SNORA26.2-201ENST00000390922 122 ntBASIC-9.55□□□□□ -3.94
TOP2AP11388 DLEU2_4.2-201ENST00000616613 58 ntBASIC-9.56□□□□□ -3.94
TOP2AP11388 MIR450A2-201ENST00000385022 100 ntBASIC-9.56□□□□□ -3.94
TOP2AP11388 Y_RNA.535-201ENST00000384612 99 ntBASIC-9.57□□□□□ -3.94
TOP2AP11388 RNU6-1056P-201ENST00000383996 107 ntBASIC-9.58□□□□□ -3.94
TOP2AP11388 RNU6-32P-201ENST00000383948 107 ntBASIC-9.59□□□□□ -3.94
TOP2AP11388 RNU6-13P-201ENST00000384248 107 ntBASIC-9.59□□□□□ -3.94
TOP2AP11388 RNU6-12P-201ENST00000384604 107 ntBASIC-9.59□□□□□ -3.94
TOP2AP11388 RNU6-41P-201ENST00000384741 107 ntBASIC-9.59□□□□□ -3.94
TOP2AP11388 Y_RNA.261-201ENST00000364631 102 ntBASIC-9.6□□□□□ -3.95
TOP2AP11388 MIR3171-201ENST00000584270 74 ntBASIC-9.61□□□□□ -3.95
TOP2AP11388 MIR4795-201ENST00000584182 89 ntBASIC-9.62□□□□□ -3.95
TOP2AP11388 MIR1302-3-201ENST00000408128 138 ntBASIC-9.66□□□□□ -3.96
TOP2AP11388 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-9.66□□□□□ -3.96
TOP2AP11388 MIR548F4-201ENST00000408515 105 ntBASIC-9.66□□□□□ -3.96
TOP2AP11388 RNU6-346P-201ENST00000516288 111 ntBASIC-9.66□□□□□ -3.96
TOP2AP11388 Y_RNA.138-201ENST00000363462 102 ntBASIC-9.71□□□□□ -3.96
TOP2AP11388 MIR548T-201ENST00000408369 74 ntBASIC-9.71□□□□□ -3.96
TOP2AP11388 Y_RNA.318-201ENST00000365131 97 ntBASIC-9.73□□□□□ -3.97
TOP2AP11388 RNU6-406P-201ENST00000516470 107 ntBASIC-9.77□□□□□ -3.97
TOP2AP11388 Y_RNA.149-201ENST00000363558 117 ntBASIC-9.78□□□□□ -3.98
TOP2AP11388 MIR3974-201ENST00000637126 96 ntBASIC-9.79□□□□□ -3.98
TOP2AP11388 RNU6-857P-201ENST00000515893 110 ntBASIC-9.8□□□□□ -3.98
TOP2AP11388 RNU6-820P-201ENST00000384273 107 ntBASIC-9.84□□□□□ -3.98
TOP2AP11388 AL117351.2-201ENST00000513571 157 ntBASIC-9.85□□□□□ -3.99
TOP2AP11388 Y_RNA.506-201ENST00000384494 102 ntBASIC-9.87□□□□□ -3.99
TOP2AP11388 RNY1P5-201ENST00000383890 115 ntBASIC-9.88□□□□□ -3.99
TOP2AP11388 RNU6-875P-201ENST00000516488 106 ntBASIC-9.89□□□□□ -3.99
TOP2AP11388 Y_RNA.717-201ENST00000517106 92 ntBASIC-9.91□□□□□ -4
TOP2AP11388 RNU6-499P-201ENST00000365615 107 ntBASIC-9.92□□□□□ -4
TOP2AP11388 RNU6-886P-201ENST00000384319 105 ntBASIC-9.93□□□□□ -4
TOP2AP11388 Y_RNA.422-201ENST00000384054 114 ntBASIC-9.95□□□□□ -4
TOP2AP11388 RNU6-279P-201ENST00000391297 101 ntBASIC-9.97□□□□□ -4
TOP2AP11388 MIR3202-2-201ENST00000635980 79 ntBASIC-9.98□□□□□ -4.01
TOP2AP11388 RNU6-147P-201ENST00000383983 107 ntBASIC-10□□□□□ -4.01
TOP2AP11388 MIR3671-201ENST00000580455 88 ntBASIC-10□□□□□ -4.01
TOP2AP11388 MIR1255A-201ENST00000408338 113 ntBASIC-10.02□□□□□ -4.01
TOP2AP11388 RNY4P30-201ENST00000410216 95 ntBASIC-10.05□□□□□ -4.02
TOP2AP11388 Y_RNA.489-201ENST00000384410 101 ntBASIC-10.06□□□□□ -4.02
TOP2AP11388 AL365222.1-201ENST00000614661 98 ntBASIC-10.07□□□□□ -4.02
TOP2AP11388 MIR4662A-201ENST00000637499 67 ntBASIC-10.08□□□□□ -4.02
TOP2AP11388 Y_RNA.81-201ENST00000362997 102 ntBASIC-10.09□□□□□ -4.02
TOP2AP11388 Y_RNA.464-201ENST00000384282 110 ntBASIC-10.15□□□□□ -4.03
TOP2AP11388 MIR568-201ENST00000385036 95 ntBASIC-10.15□□□□□ -4.03
TOP2AP11388 MTCYBP9-201ENST00000431021 303 ntBASIC-10.16□□□□□ -4.04
TOP2AP11388 RNU6-1212P-201ENST00000517023 104 ntBASIC-10.16□□□□□ -4.04
TOP2AP11388 RNU6-614P-201ENST00000384369 107 ntBASIC-10.17□□□□□ -4.04
TOP2AP11388 U6.59-201ENST00000615686 107 ntBASIC-10.17□□□□□ -4.04
TOP2AP11388 AC125388.1-201ENST00000459631 156 ntBASIC-10.23□□□□□ -4.05
TOP2AP11388 MT-TD-201ENST00000387419 68 ntBASIC-10.23□□□□□ -4.05
TOP2AP11388 AC008737.2-201ENST00000599446 118 ntBASIC-10.27□□□□□ -4.05
TOP2AP11388 Y_RNA.193-201ENST00000363979 102 ntBASIC-10.3□□□□□ -4.06
TOP2AP11388 RNA5SP89-201ENST00000410300 108 ntBASIC-10.32□□□□□ -4.06
TOP2AP11388 RNU6-1168P-201ENST00000390831 104 ntBASIC-10.33□□□□□ -4.06
TOP2AP11388 RNU6-1160P-201ENST00000384546 104 ntBASIC-10.35□□□□□ -4.07
TOP2AP11388 RNU6-327P-201ENST00000516270 127 ntBASIC-10.35□□□□□ -4.07
TOP2AP11388 RNU6-724P-201ENST00000390958 105 ntBASIC-10.38□□□□□ -4.07
TOP2AP11388 RNU6-1117P-201ENST00000384525 104 ntBASIC-10.41□□□□□ -4.08
TOP2AP11388 RNU6-573P-201ENST00000383938 106 ntBASIC-10.42□□□□□ -4.08
TOP2AP11388 MTCYBP6-201ENST00000441810 138 ntBASIC-10.42□□□□□ -4.08
TOP2AP11388 RNU6-388P-201ENST00000517012 105 ntBASIC-10.46□□□□□ -4.08
TOP2AP11388 RNU6-389P-201ENST00000517048 105 ntBASIC-10.46□□□□□ -4.08
TOP2AP11388 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-10.51□□□□□ -4.09
TOP2AP11388 RNU6-22P-201ENST00000384355 107 ntBASIC-10.56□□□□□ -4.1
TOP2AP11388 RNA5SP225-201ENST00000410874 135 ntBASIC-10.6□□□□□ -4.11
TOP2AP11388 MIR4503-201ENST00000582187 83 ntBASIC-10.6□□□□□ -4.11
TOP2AP11388 RNU6-1154P-201ENST00000391001 104 ntBASIC-10.61□□□□□ -4.11
TOP2AP11388 MIR606-201ENST00000384851 96 ntBASIC-10.62□□□□□ -4.11
TOP2AP11388 MTND3P3-201ENST00000505004 126 ntBASIC-10.63□□□□□ -4.11
TOP2AP11388 Y_RNA.702-201ENST00000516843 96 ntBASIC-10.67□□□□□ -4.12
TOP2AP11388 RNU6-623P-201ENST00000363143 105 ntBASIC-10.68□□□□□ -4.12
TOP2AP11388 Y_RNA.694-201ENST00000516677 117 ntBASIC-10.68□□□□□ -4.12
TOP2AP11388 SNORD78.1-201ENST00000390866 65 ntBASIC-10.69□□□□□ -4.12
TOP2AP11388 Y_RNA.369-201ENST00000365568 117 ntBASIC-10.75□□□□□ -4.13
TOP2AP11388 RNU6-313P-201ENST00000516317 112 ntBASIC-10.75□□□□□ -4.13
TOP2AP11388 RNU6-738P-201ENST00000384531 106 ntBASIC-10.79□□□□□ -4.14
TOP2AP11388 MIR3133-201ENST00000583157 78 ntBASIC-10.8□□□□□ -4.14
TOP2AP11388 Y_RNA.703-201ENST00000516846 111 ntBASIC-10.82□□□□□ -4.14
TOP2AP11388 MIR5582-201ENST00000579697 68 ntBASIC-10.82□□□□□ -4.14
TOP2AP11388 Y_RNA.61-201ENST00000362835 102 ntBASIC-10.84□□□□□ -4.14
TOP2AP11388 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-10.84□□□□□ -4.14
TOP2AP11388 RNU6-919P-201ENST00000516731 104 ntBASIC-10.86□□□□□ -4.15
TOP2AP11388 MIR3908-201ENST00000579798 126 ntBASIC-10.89□□□□□ -4.15
TOP2AP11388 SNORD73B-201ENST00000364394 72 ntBASIC-10.98□□□□□ -4.17
TOP2AP11388 SNORD20-201ENST00000384550 80 ntBASIC-11□□□□□ -4.17
TOP2AP11388 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-11.01□□□□□ -4.17
TOP2AP11388 RNU6-215P-201ENST00000365169 102 ntBASIC-11.02□□□□□ -4.17
TOP2AP11388 Y_RNA.388-201ENST00000383919 113 ntBASIC-11.02□□□□□ -4.17
TOP2AP11388 RNY4P29-201ENST00000410801 97 ntBASIC-11.03□□□□□ -4.17
TOP2AP11388 MT-TG-201ENST00000387429 68 ntBASIC-11.06□□□□□ -4.18
TOP2AP11388 RNU6-44P-201ENST00000384045 107 ntBASIC-11.12□□□□□ -4.19
TOP2AP11388 MIR548S-201ENST00000581352 82 ntBASIC-11.27□□□□□ -4.21
TOP2AP11388 MTND4LP19-201ENST00000403051 166 ntBASIC-11.35□□□□□ -4.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms