Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-122P-201ENST00000516818 107 ntBASIC-5.11□□□□□ -3.23
TPM4P67936 RNU6-844P-201ENST00000517175 102 ntBASIC-5.12□□□□□ -3.23
TPM4P67936 RNU6-1044P-201ENST00000384755 107 ntBASIC-5.13□□□□□ -3.23
TPM4P67936 AC008267.6-201ENST00000441664 139 ntBASIC-5.13□□□□□ -3.23
TPM4P67936 SNORD114-13-201ENST00000364377 74 ntBASIC-5.14□□□□□ -3.23
TPM4P67936 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.14□□□□□ -3.23
TPM4P67936 AP001094.1-201ENST00000579805 193 ntBASIC-5.14□□□□□ -3.23
TPM4P67936 RNU6-1011P-201ENST00000384668 107 ntBASIC-5.15□□□□□ -3.23
TPM4P67936 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.15□□□□□ -3.23
TPM4P67936 Y_RNA.204-201ENST00000364112 102 ntBASIC-5.16□□□□□ -3.24
TPM4P67936 RNU6-1056P-201ENST00000383996 107 ntBASIC-5.16□□□□□ -3.24
TPM4P67936 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.16□□□□□ -3.24
TPM4P67936 RNU6-419P-201ENST00000517030 63 ntBASIC-5.16□□□□□ -3.24
TPM4P67936 RNU7-119P-201ENST00000459279 63 ntBASIC-5.17□□□□□ -3.24
TPM4P67936 RNU6-737P-201ENST00000365370 107 ntBASIC-5.18□□□□□ -3.24
TPM4P67936 RNU6-687P-201ENST00000516443 89 ntBASIC-5.18□□□□□ -3.24
TPM4P67936 RNY4-201ENST00000516507 96 ntBASIC-5.18□□□□□ -3.24
TPM4P67936 SCARNA15.1-201ENST00000516384 125 ntBASIC-5.19□□□□□ -3.24
TPM4P67936 Y_RNA.43-201ENST00000362670 111 ntBASIC-5.2□□□□□ -3.24
TPM4P67936 Y_RNA.709-201ENST00000516952 92 ntBASIC-5.2□□□□□ -3.24
TPM4P67936 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.2□□□□□ -3.24
TPM4P67936 RNU6-822P-201ENST00000362707 106 ntBASIC-5.21□□□□□ -3.24
TPM4P67936 SNORA25.5-201ENST00000363782 126 ntBASIC-5.21□□□□□ -3.24
TPM4P67936 MIR488-201ENST00000365739 83 ntBASIC-5.21□□□□□ -3.24
TPM4P67936 MIR3134-201ENST00000579433 74 ntBASIC-5.21□□□□□ -3.24
TPM4P67936 Y_RNA.382-201ENST00000365672 114 ntBASIC-5.22□□□□□ -3.25
TPM4P67936 RNU6-959P-201ENST00000384671 107 ntBASIC-5.22□□□□□ -3.25
TPM4P67936 MIR4712-201ENST00000583750 82 ntBASIC-5.25□□□□□ -3.25
TPM4P67936 AC139453.2-201ENST00000487255 133 ntBASIC-5.27□□□□□ -3.25
TPM4P67936 MIR5588-201ENST00000581890 63 ntBASIC-5.28□□□□□ -3.25
TPM4P67936 RNU6-854P-201ENST00000364036 107 ntBASIC-5.29□□□□□ -3.26
TPM4P67936 MIR509-1-201ENST00000385265 94 ntBASIC-5.29□□□□□ -3.26
TPM4P67936 MIR509-2-201ENST00000390724 91 ntBASIC-5.29□□□□□ -3.26
TPM4P67936 AC062037.1-201ENST00000605302 128 ntBASIC-5.29□□□□□ -3.26
TPM4P67936 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.3□□□□□ -3.26
TPM4P67936 AL365222.1-201ENST00000614661 98 ntBASIC-5.3□□□□□ -3.26
TPM4P67936 MIR1245B-201ENST00000636115 69 ntBASIC-5.3□□□□□ -3.26
TPM4P67936 IGLL4P-201ENST00000614590 133 ntBASIC-5.31□□□□□ -3.26
TPM4P67936 RNU6-1134P-201ENST00000365156 101 ntBASIC-5.34□□□□□ -3.26
TPM4P67936 RNU6-979P-201ENST00000383896 107 ntBASIC-5.34□□□□□ -3.26
TPM4P67936 MIR656-201ENST00000385224 78 ntBASIC-5.34□□□□□ -3.26
TPM4P67936 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.34□□□□□ -3.26
TPM4P67936 RNU6-640P-201ENST00000363693 105 ntBASIC-5.35□□□□□ -3.27
TPM4P67936 RNA5SP224-201ENST00000365069 126 ntBASIC-5.36□□□□□ -3.27
TPM4P67936 RNU6-411P-201ENST00000384451 107 ntBASIC-5.38□□□□□ -3.27
TPM4P67936 Y_RNA.511-201ENST00000384514 103 ntBASIC-5.38□□□□□ -3.27
TPM4P67936 SNORD115-45-201ENST00000391078 81 ntBASIC-5.39□□□□□ -3.27
TPM4P67936 Y_RNA.703-201ENST00000516846 111 ntBASIC-5.39□□□□□ -3.27
TPM4P67936 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.41□□□□□ -3.28
TPM4P67936 RNU7-171P-201ENST00000459581 62 ntBASIC-5.41□□□□□ -3.28
TPM4P67936 Y_RNA.260-201ENST00000364628 101 ntBASIC-5.42□□□□□ -3.28
TPM4P67936 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.42□□□□□ -3.28
TPM4P67936 RNA5SP106-201ENST00000517274 100 ntBASIC-5.42□□□□□ -3.28
TPM4P67936 Y_RNA.206-201ENST00000364136 102 ntBASIC-5.44□□□□□ -3.28
TPM4P67936 MIR3133-201ENST00000583157 78 ntBASIC-5.44□□□□□ -3.28
TPM4P67936 SNORD45C-201ENST00000383893 79 ntBASIC-5.46□□□□□ -3.28
TPM4P67936 RNU6-32P-201ENST00000383948 107 ntBASIC-5.46□□□□□ -3.28
TPM4P67936 RNU6-13P-201ENST00000384248 107 ntBASIC-5.46□□□□□ -3.28
TPM4P67936 RNU6-12P-201ENST00000384604 107 ntBASIC-5.46□□□□□ -3.28
TPM4P67936 RNU6-41P-201ENST00000384741 107 ntBASIC-5.46□□□□□ -3.28
TPM4P67936 RNU6-663P-201ENST00000391105 106 ntBASIC-5.46□□□□□ -3.28
TPM4P67936 RNU6-987P-201ENST00000384759 104 ntBASIC-5.47□□□□□ -3.29
TPM4P67936 MIR124-1-201ENST00000385275 85 ntBASIC-5.48□□□□□ -3.29
TPM4P67936 MIR3938-201ENST00000582157 103 ntBASIC-5.48□□□□□ -3.29
TPM4P67936 SNORA25.4-201ENST00000363666 124 ntBASIC-5.5□□□□□ -3.29
TPM4P67936 RNU6-1340P-201ENST00000384438 107 ntBASIC-5.5□□□□□ -3.29
TPM4P67936 RNU6-940P-201ENST00000363433 104 ntBASIC-5.51□□□□□ -3.29
TPM4P67936 RNY4P10-201ENST00000365571 96 ntBASIC-5.51□□□□□ -3.29
TPM4P67936 RNU6-81P-201ENST00000365608 104 ntBASIC-5.51□□□□□ -3.29
TPM4P67936 RNU6-1168P-201ENST00000390831 104 ntBASIC-5.51□□□□□ -3.29
TPM4P67936 RNU6-634P-201ENST00000459134 106 ntBASIC-5.51□□□□□ -3.29
TPM4P67936 Y_RNA.566-201ENST00000384735 101 ntBASIC-5.54□□□□□ -3.3
TPM4P67936 RNU6-1121P-201ENST00000516802 109 ntBASIC-5.54□□□□□ -3.3
TPM4P67936 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.55□□□□□ -3.3
TPM4P67936 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-5.55□□□□□ -3.3
TPM4P67936 Y_RNA.657-201ENST00000515983 102 ntBASIC-5.56□□□□□ -3.3
TPM4P67936 MIR4317-201ENST00000637586 65 ntBASIC-5.56□□□□□ -3.3
TPM4P67936 RNU6-836P-201ENST00000362920 107 ntBASIC-5.57□□□□□ -3.3
TPM4P67936 MIR548X-201ENST00000580069 75 ntBASIC-5.57□□□□□ -3.3
TPM4P67936 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.58□□□□□ -3.3
TPM4P67936 SNORD115.2-201ENST00000391126 59 ntBASIC-5.59□□□□□ -3.3
TPM4P67936 MIR548AH-201ENST00000637109 76 ntBASIC-5.59□□□□□ -3.3
TPM4P67936 MIR4511-201ENST00000582784 87 ntBASIC-5.6□□□□□ -3.31
TPM4P67936 RNU6-22P-201ENST00000384355 107 ntBASIC-5.63□□□□□ -3.31
TPM4P67936 MIR548H4-201ENST00000408689 111 ntBASIC-5.64□□□□□ -3.31
TPM4P67936 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.69□□□□□ -3.32
TPM4P67936 Y_RNA.335-201ENST00000365299 96 ntBASIC-5.69□□□□□ -3.32
TPM4P67936 RNU6-49P-201ENST00000384256 107 ntBASIC-5.69□□□□□ -3.32
TPM4P67936 RNU6-242P-201ENST00000384359 107 ntBASIC-5.69□□□□□ -3.32
TPM4P67936 RNU6-788P-201ENST00000390967 104 ntBASIC-5.69□□□□□ -3.32
TPM4P67936 U7.4-201ENST00000614961 63 ntBASIC-5.69□□□□□ -3.32
TPM4P67936 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.71□□□□□ -3.32
TPM4P67936 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.71□□□□□ -3.32
TPM4P67936 SNORD30.1-201ENST00000391309 70 ntBASIC-5.71□□□□□ -3.32
TPM4P67936 MIR4666B-201ENST00000578142 81 ntBASIC-5.71□□□□□ -3.32
TPM4P67936 AC103706.3-201ENST00000636297 85 ntBASIC-5.71□□□□□ -3.32
TPM4P67936 RNU6-147P-201ENST00000383983 107 ntBASIC-5.72□□□□□ -3.33
TPM4P67936 RNU6-313P-201ENST00000516317 112 ntBASIC-5.75□□□□□ -3.33
TPM4P67936 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.76□□□□□ -3.33
TPM4P67936 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.76□□□□□ -3.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms