Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORA40.16-201ENST00000517238 121 ntBASIC-5.01□□□□□ -3.21
TPM1P09493 RNU6-979P-201ENST00000383896 107 ntBASIC-5.02□□□□□ -3.21
TPM1P09493 RNU7-119P-201ENST00000459279 63 ntBASIC-5.02□□□□□ -3.21
TPM1P09493 RNU6-687P-201ENST00000516443 89 ntBASIC-5.02□□□□□ -3.21
TPM1P09493 MIR5693-201ENST00000577722 73 ntBASIC-5.03□□□□□ -3.21
TPM1P09493 RNU6-81P-201ENST00000365608 104 ntBASIC-5.04□□□□□ -3.22
TPM1P09493 RNY4P25-201ENST00000459254 96 ntBASIC-5.04□□□□□ -3.22
TPM1P09493 MIR3134-201ENST00000579433 74 ntBASIC-5.04□□□□□ -3.22
TPM1P09493 RNU6-122P-201ENST00000516818 107 ntBASIC-5.05□□□□□ -3.22
TPM1P09493 Y_RNA.63-201ENST00000362841 102 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 RNU6-32P-201ENST00000383948 107 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 RNU6-13P-201ENST00000384248 107 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 RNU6-12P-201ENST00000384604 107 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 RNU6-41P-201ENST00000384741 107 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 RNU6-1168P-201ENST00000390831 104 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.06□□□□□ -3.22
TPM1P09493 RNU7-171P-201ENST00000459581 62 ntBASIC-5.09□□□□□ -3.22
TPM1P09493 SNORA25.5-201ENST00000363782 126 ntBASIC-5.1□□□□□ -3.23
TPM1P09493 RNU6-1015P-201ENST00000517121 99 ntBASIC-5.13□□□□□ -3.23
TPM1P09493 RNU6-800P-201ENST00000384473 103 ntBASIC-5.14□□□□□ -3.23
TPM1P09493 RNU6-411P-201ENST00000384451 107 ntBASIC-5.16□□□□□ -3.24
TPM1P09493 MIRLET7A3-201ENST00000362116 74 ntBASIC-5.17□□□□□ -3.24
TPM1P09493 RNU6-22P-201ENST00000384355 107 ntBASIC-5.17□□□□□ -3.24
TPM1P09493 RNU6-742P-201ENST00000365289 107 ntBASIC-5.18□□□□□ -3.24
TPM1P09493 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.19□□□□□ -3.24
TPM1P09493 RNU6-1169P-201ENST00000363537 103 ntBASIC-5.19□□□□□ -3.24
TPM1P09493 Y_RNA.186-201ENST00000363899 92 ntBASIC-5.19□□□□□ -3.24
TPM1P09493 RNU6-1124P-201ENST00000384169 107 ntBASIC-5.2□□□□□ -3.24
TPM1P09493 AC090425.1-201ENST00000610007 140 ntBASIC-5.22□□□□□ -3.25
TPM1P09493 Y_RNA.79-201ENST00000362992 113 ntBASIC-5.23□□□□□ -3.25
TPM1P09493 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.23□□□□□ -3.25
TPM1P09493 Y_RNA.830-201ENST00000628531 96 ntBASIC-5.23□□□□□ -3.25
TPM1P09493 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-5.24□□□□□ -3.25
TPM1P09493 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.24□□□□□ -3.25
TPM1P09493 RNU6-663P-201ENST00000391105 106 ntBASIC-5.24□□□□□ -3.25
TPM1P09493 RNU6-1079P-201ENST00000362861 110 ntBASIC-5.27□□□□□ -3.25
TPM1P09493 Y_RNA.612-201ENST00000410717 95 ntBASIC-5.27□□□□□ -3.25
TPM1P09493 RNU6-313P-201ENST00000516317 112 ntBASIC-5.27□□□□□ -3.25
TPM1P09493 RNU6-419P-201ENST00000517030 63 ntBASIC-5.27□□□□□ -3.25
TPM1P09493 RNU6-794P-201ENST00000517261 64 ntBASIC-5.27□□□□□ -3.25
TPM1P09493 RNU6-822P-201ENST00000362707 106 ntBASIC-5.28□□□□□ -3.25
TPM1P09493 RNU6-634P-201ENST00000459134 106 ntBASIC-5.28□□□□□ -3.25
TPM1P09493 Y_RNA.134-201ENST00000363435 105 ntBASIC-5.29□□□□□ -3.26
TPM1P09493 SNORA25.4-201ENST00000363666 124 ntBASIC-5.29□□□□□ -3.26
TPM1P09493 Y_RNA.204-201ENST00000364112 102 ntBASIC-5.29□□□□□ -3.26
TPM1P09493 RNU6-209P-201ENST00000384118 107 ntBASIC-5.29□□□□□ -3.26
TPM1P09493 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.31□□□□□ -3.26
TPM1P09493 RNU6-147P-201ENST00000383983 107 ntBASIC-5.31□□□□□ -3.26
TPM1P09493 RNY4-201ENST00000516507 96 ntBASIC-5.31□□□□□ -3.26
TPM1P09493 RNU6-49P-201ENST00000384256 107 ntBASIC-5.33□□□□□ -3.26
TPM1P09493 RNU6-242P-201ENST00000384359 107 ntBASIC-5.34□□□□□ -3.26
TPM1P09493 Y_RNA.658-201ENST00000515990 97 ntBASIC-5.34□□□□□ -3.26
TPM1P09493 AL359920.1-201ENST00000618332 176 ntBASIC-5.34□□□□□ -3.26
TPM1P09493 RNU6-940P-201ENST00000363433 104 ntBASIC-5.35□□□□□ -3.27
TPM1P09493 Y_RNA.266-201ENST00000364678 96 ntBASIC-5.35□□□□□ -3.27
TPM1P09493 U7.4-201ENST00000614961 63 ntBASIC-5.38□□□□□ -3.27
TPM1P09493 MIR4666B-201ENST00000578142 81 ntBASIC-5.39□□□□□ -3.27
TPM1P09493 Y_RNA.43-201ENST00000362670 111 ntBASIC-5.4□□□□□ -3.27
TPM1P09493 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.41□□□□□ -3.28
TPM1P09493 Y_RNA.382-201ENST00000365672 114 ntBASIC-5.42□□□□□ -3.28
TPM1P09493 AC099654.10-201ENST00000640395 161 ntBASIC-5.42□□□□□ -3.28
TPM1P09493 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.43□□□□□ -3.28
TPM1P09493 MIR3938-201ENST00000582157 103 ntBASIC-5.43□□□□□ -3.28
TPM1P09493 RNU6-737P-201ENST00000365370 107 ntBASIC-5.44□□□□□ -3.28
TPM1P09493 AC062037.1-201ENST00000605302 128 ntBASIC-5.44□□□□□ -3.28
TPM1P09493 RNU6-1044P-201ENST00000384755 107 ntBASIC-5.45□□□□□ -3.28
TPM1P09493 Y_RNA.652-201ENST00000458902 102 ntBASIC-5.45□□□□□ -3.28
TPM1P09493 AC139453.2-201ENST00000487255 133 ntBASIC-5.45□□□□□ -3.28
TPM1P09493 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.45□□□□□ -3.28
TPM1P09493 MIR4719-201ENST00000585233 84 ntBASIC-5.46□□□□□ -3.28
TPM1P09493 SNORD30.1-201ENST00000391309 70 ntBASIC-5.47□□□□□ -3.29
TPM1P09493 MIR4511-201ENST00000582784 87 ntBASIC-5.47□□□□□ -3.29
TPM1P09493 RNU6-803P-201ENST00000516034 102 ntBASIC-5.49□□□□□ -3.29
TPM1P09493 MIR494-201ENST00000349529 81 ntBASIC-5.5□□□□□ -3.29
TPM1P09493 AC103706.3-201ENST00000636297 85 ntBASIC-5.5□□□□□ -3.29
TPM1P09493 SNORD114-13-201ENST00000364377 74 ntBASIC-5.53□□□□□ -3.29
TPM1P09493 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.56□□□□□ -3.3
TPM1P09493 MIR656-201ENST00000385224 78 ntBASIC-5.56□□□□□ -3.3
TPM1P09493 MIR450A2-201ENST00000385022 100 ntBASIC-5.57□□□□□ -3.3
TPM1P09493 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.59□□□□□ -3.3
TPM1P09493 RNU6-871P-201ENST00000516122 100 ntBASIC-5.6□□□□□ -3.31
TPM1P09493 Y_RNA.260-201ENST00000364628 101 ntBASIC-5.61□□□□□ -3.31
TPM1P09493 RNA5SP224-201ENST00000365069 126 ntBASIC-5.61□□□□□ -3.31
TPM1P09493 RNU6-787P-201ENST00000384032 107 ntBASIC-5.61□□□□□ -3.31
TPM1P09493 Y_RNA.206-201ENST00000364136 102 ntBASIC-5.64□□□□□ -3.31
TPM1P09493 U6.111-201ENST00000636093 83 ntBASIC-5.64□□□□□ -3.31
TPM1P09493 RNU6-854P-201ENST00000364036 107 ntBASIC-5.65□□□□□ -3.31
TPM1P09493 MIR509-1-201ENST00000385265 94 ntBASIC-5.65□□□□□ -3.31
TPM1P09493 MIR509-2-201ENST00000390724 91 ntBASIC-5.65□□□□□ -3.31
TPM1P09493 MIR4317-201ENST00000637586 65 ntBASIC-5.65□□□□□ -3.31
TPM1P09493 MIR4679-1-201ENST00000637619 75 ntBASIC-5.65□□□□□ -3.31
TPM1P09493 RNA5SP89-201ENST00000410300 108 ntBASIC-5.66□□□□□ -3.32
TPM1P09493 RNU6-919P-201ENST00000516731 104 ntBASIC-5.66□□□□□ -3.32
TPM1P09493 MIR548X-201ENST00000580069 75 ntBASIC-5.66□□□□□ -3.32
TPM1P09493 RNU6-539P-201ENST00000516665 103 ntBASIC-5.67□□□□□ -3.32
TPM1P09493 SNORD45C-201ENST00000383893 79 ntBASIC-5.68□□□□□ -3.32
TPM1P09493 RNU6-1340P-201ENST00000384438 107 ntBASIC-5.68□□□□□ -3.32
TPM1P09493 RNY4P30-201ENST00000410216 95 ntBASIC-5.68□□□□□ -3.32
TPM1P09493 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.68□□□□□ -3.32
TPM1P09493 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-5.7□□□□□ -3.32
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms