Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR3974-201ENST00000637126 96 ntBASIC-3.1□□□□□ -2.91
TNFP01375 Y_RNA.216-201ENST00000364205 93 ntBASIC-3.11□□□□□ -2.91
TNFP01375 MIR1302-5-201ENST00000408164 150 ntBASIC-3.11□□□□□ -2.91
TNFP01375 RNU6-634P-201ENST00000459134 106 ntBASIC-3.11□□□□□ -2.91
TNFP01375 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.11□□□□□ -2.91
TNFP01375 MTND5P41-201ENST00000517498 206 ntBASIC-3.11□□□□□ -2.91
TNFP01375 AC072026.1-201ENST00000605023 201 ntBASIC-3.11□□□□□ -2.91
TNFP01375 MTND4P29-201ENST00000503122 1372 ntBASIC-3.12□□□□□ -2.91
TNFP01375 Y_RNA.200-201ENST00000364018 102 ntBASIC-3.12□□□□□ -2.91
TNFP01375 RNU4-33P-201ENST00000364316 85 ntBASIC-3.12□□□□□ -2.91
TNFP01375 RNU6-380P-201ENST00000410207 107 ntBASIC-3.12□□□□□ -2.91
TNFP01375 RNU4-71P-201ENST00000516258 113 ntBASIC-3.12□□□□□ -2.91
TNFP01375 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.13□□□□□ -2.91
TNFP01375 U6.95-201ENST00000636931 70 ntBASIC-3.13□□□□□ -2.91
TNFP01375 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.14□□□□□ -2.91
TNFP01375 MTATP8P1-201ENST00000467115 207 ntBASIC-3.14□□□□□ -2.91
TNFP01375 AC090425.1-201ENST00000610007 140 ntBASIC-3.14□□□□□ -2.91
TNFP01375 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.15□□□□□ -2.91
TNFP01375 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.15□□□□□ -2.91
TNFP01375 AC110620.1-201ENST00000416042 228 ntBASIC-3.15□□□□□ -2.91
TNFP01375 RNU6-985P-201ENST00000410182 104 ntBASIC-3.16□□□□□ -2.92
TNFP01375 MIR5588-201ENST00000581890 63 ntBASIC-3.16□□□□□ -2.92
TNFP01375 MIR3128-201ENST00000581957 66 ntBASIC-3.16□□□□□ -2.92
TNFP01375 MIR1245B-201ENST00000636115 69 ntBASIC-3.16□□□□□ -2.92
TNFP01375 RNU6-713P-201ENST00000384761 107 ntBASIC-3.17□□□□□ -2.92
TNFP01375 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-3.17□□□□□ -2.92
TNFP01375 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.18□□□□□ -2.92
TNFP01375 RNU6-294P-201ENST00000364999 102 ntBASIC-3.18□□□□□ -2.92
TNFP01375 RNU6-635P-201ENST00000516651 102 ntBASIC-3.18□□□□□ -2.92
TNFP01375 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.19□□□□□ -2.92
TNFP01375 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.19□□□□□ -2.92
TNFP01375 Y_RNA.194-201ENST00000363985 102 ntBASIC-3.2□□□□□ -2.92
TNFP01375 RNU6-959P-201ENST00000384671 107 ntBASIC-3.2□□□□□ -2.92
TNFP01375 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.2□□□□□ -2.92
TNFP01375 RNU6-844P-201ENST00000517175 102 ntBASIC-3.2□□□□□ -2.92
TNFP01375 AC103706.3-201ENST00000636297 85 ntBASIC-3.2□□□□□ -2.92
TNFP01375 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.21□□□□□ -2.92
TNFP01375 RNU6-787P-201ENST00000384032 107 ntBASIC-3.21□□□□□ -2.92
TNFP01375 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.21□□□□□ -2.92
TNFP01375 RNU7-120P-201ENST00000459334 63 ntBASIC-3.21□□□□□ -2.92
TNFP01375 AL353621.2-201ENST00000605340 133 ntBASIC-3.21□□□□□ -2.92
TNFP01375 RNU6-620P-201ENST00000384017 96 ntBASIC-3.22□□□□□ -2.92
TNFP01375 RNU7-171P-201ENST00000459581 62 ntBASIC-3.22□□□□□ -2.92
TNFP01375 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.23□□□□□ -2.93
TNFP01375 SNORA40-201ENST00000388090 126 ntBASIC-3.23□□□□□ -2.93
TNFP01375 MIR548F4-201ENST00000408515 105 ntBASIC-3.23□□□□□ -2.93
TNFP01375 U6.111-201ENST00000636093 83 ntBASIC-3.23□□□□□ -2.93
TNFP01375 RNU6-640P-201ENST00000363693 105 ntBASIC-3.24□□□□□ -2.93
TNFP01375 RNU6-838P-201ENST00000363399 108 ntBASIC-3.25□□□□□ -2.93
TNFP01375 Y_RNA.138-201ENST00000363462 102 ntBASIC-3.25□□□□□ -2.93
TNFP01375 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.26□□□□□ -2.93
TNFP01375 SNORD30.1-201ENST00000391309 70 ntBASIC-3.26□□□□□ -2.93
TNFP01375 MIR450A1-201ENST00000362262 91 ntBASIC-3.27□□□□□ -2.93
TNFP01375 MIR2052-201ENST00000636055 55 ntBASIC-3.27□□□□□ -2.93
TNFP01375 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.28□□□□□ -2.93
TNFP01375 MIR494-201ENST00000349529 81 ntBASIC-3.3□□□□□ -2.94
TNFP01375 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.3□□□□□ -2.94
TNFP01375 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.3□□□□□ -2.94
TNFP01375 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.3□□□□□ -2.94
TNFP01375 MTND5P20-201ENST00000448677 143 ntBASIC-3.3□□□□□ -2.94
TNFP01375 RNU6-589P-201ENST00000516485 107 ntBASIC-3.3□□□□□ -2.94
TNFP01375 MIR4795-201ENST00000584182 89 ntBASIC-3.3□□□□□ -2.94
TNFP01375 RNU6-627P-201ENST00000364032 102 ntBASIC-3.31□□□□□ -2.94
TNFP01375 AC114801.3-201ENST00000510231 177 ntBASIC-3.31□□□□□ -2.94
TNFP01375 RNU6-829P-201ENST00000363700 112 ntBASIC-3.32□□□□□ -2.94
TNFP01375 RNU6-81P-201ENST00000365608 104 ntBASIC-3.32□□□□□ -2.94
TNFP01375 MIR3171-201ENST00000584270 74 ntBASIC-3.33□□□□□ -2.94
TNFP01375 SNORD111B-201ENST00000408587 80 ntBASIC-3.34□□□□□ -2.94
TNFP01375 MIR4666B-201ENST00000578142 81 ntBASIC-3.34□□□□□ -2.94
TNFP01375 RNU6-49P-201ENST00000384256 107 ntBASIC-3.35□□□□□ -2.95
TNFP01375 MIR548F3-201ENST00000408509 87 ntBASIC-3.35□□□□□ -2.95
TNFP01375 SNORA40.13-201ENST00000516379 120 ntBASIC-3.35□□□□□ -2.95
TNFP01375 SNORD116-14-201ENST00000383894 92 ntBASIC-3.36□□□□□ -2.95
TNFP01375 SNORD116-17-201ENST00000383929 92 ntBASIC-3.36□□□□□ -2.95
TNFP01375 SNORD116-15-201ENST00000384445 92 ntBASIC-3.36□□□□□ -2.95
TNFP01375 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.36□□□□□ -2.95
TNFP01375 SNORD116-19-201ENST00000384729 92 ntBASIC-3.36□□□□□ -2.95
TNFP01375 RNU6-346P-201ENST00000516288 111 ntBASIC-3.36□□□□□ -2.95
TNFP01375 U7.4-201ENST00000614961 63 ntBASIC-3.36□□□□□ -2.95
TNFP01375 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.37□□□□□ -2.95
TNFP01375 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.37□□□□□ -2.95
TNFP01375 RNU7-200P-201ENST00000516105 62 ntBASIC-3.37□□□□□ -2.95
TNFP01375 RNU6-539P-201ENST00000516665 103 ntBASIC-3.37□□□□□ -2.95
TNFP01375 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.37□□□□□ -2.95
TNFP01375 MIR568-201ENST00000385036 95 ntBASIC-3.38□□□□□ -2.95
TNFP01375 RNU6-875P-201ENST00000516488 106 ntBASIC-3.38□□□□□ -2.95
TNFP01375 AC134503.1-201ENST00000633048 54 ntBASIC-3.38□□□□□ -2.95
TNFP01375 SNORA20.1-201ENST00000364790 130 ntBASIC-3.39□□□□□ -2.95
TNFP01375 IGLL4P-201ENST00000614590 133 ntBASIC-3.39□□□□□ -2.95
TNFP01375 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.4□□□□□ -2.95
TNFP01375 MIR633-201ENST00000384821 98 ntBASIC-3.42□□□□□ -2.96
TNFP01375 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.44□□□□□ -2.96
TNFP01375 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.44□□□□□ -2.96
TNFP01375 AL031737.1-201ENST00000450125 223 ntBASIC-3.44□□□□□ -2.96
TNFP01375 AC062037.2-201ENST00000610137 73 ntBASIC-3.44□□□□□ -2.96
TNFP01375 RNU6-153P-201ENST00000364422 104 ntBASIC-3.45□□□□□ -2.96
TNFP01375 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.46□□□□□ -2.96
TNFP01375 RNY4P19-201ENST00000362530 96 ntBASIC-3.47□□□□□ -2.96
TNFP01375 RNU6-485P-201ENST00000363475 107 ntBASIC-3.47□□□□□ -2.96
TNFP01375 RNU6-753P-201ENST00000363926 107 ntBASIC-3.49□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 543.8 ms