Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.89□□□□□ -3.03
TRAV1-2A0A0B4J238 RNU6-665P-201ENST00000384639 107 ntBASIC-3.9□□□□□ -3.03
TRAV1-2A0A0B4J238 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.9□□□□□ -3.03
TRAV1-2A0A0B4J238 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.9□□□□□ -3.03
TRAV1-2A0A0B4J238 RNA5SP224-201ENST00000365069 126 ntBASIC-3.91□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.91□□□□□ -3.04
TRAV1-2A0A0B4J238 MIR606-201ENST00000384851 96 ntBASIC-3.91□□□□□ -3.04
TRAV1-2A0A0B4J238 MIR4801-201ENST00000582704 82 ntBASIC-3.91□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.92□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.93□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.94□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.94□□□□□ -3.04
TRAV1-2A0A0B4J238 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.94□□□□□ -3.04
TRAV1-2A0A0B4J238 MIR3134-201ENST00000579433 74 ntBASIC-3.94□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.95□□□□□ -3.04
TRAV1-2A0A0B4J238 RNU6-255P-201ENST00000516957 105 ntBASIC-3.95□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.95□□□□□ -3.04
TRAV1-2A0A0B4J238 SNORD45C-201ENST00000383893 79 ntBASIC-3.96□□□□□ -3.04
TRAV1-2A0A0B4J238 RNU6-886P-201ENST00000384319 105 ntBASIC-3.97□□□□□ -3.04
TRAV1-2A0A0B4J238 SNORA40.13-201ENST00000516379 120 ntBASIC-3.97□□□□□ -3.04
TRAV1-2A0A0B4J238 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.98□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-738P-201ENST00000384531 106 ntBASIC-3.98□□□□□ -3.05
TRAV1-2A0A0B4J238 MIR4712-201ENST00000583750 82 ntBASIC-3.98□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-411P-201ENST00000384451 107 ntBASIC-3.99□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-346P-201ENST00000516288 111 ntBASIC-3.99□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-844P-201ENST00000517175 102 ntBASIC-3.99□□□□□ -3.05
TRAV1-2A0A0B4J238 MIR124-1-201ENST00000385275 85 ntBASIC-4□□□□□ -3.05
TRAV1-2A0A0B4J238 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.01□□□□□ -3.05
TRAV1-2A0A0B4J238 MIR4317-201ENST00000637586 65 ntBASIC-4.01□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-940P-201ENST00000363433 104 ntBASIC-4.02□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-589P-201ENST00000516485 107 ntBASIC-4.02□□□□□ -3.05
TRAV1-2A0A0B4J238 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.02□□□□□ -3.05
TRAV1-2A0A0B4J238 MIR4503-201ENST00000582187 83 ntBASIC-4.02□□□□□ -3.05
TRAV1-2A0A0B4J238 MIR1245B-201ENST00000636115 69 ntBASIC-4.02□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6-836P-201ENST00000362920 107 ntBASIC-4.03□□□□□ -3.05
TRAV1-2A0A0B4J238 RNY1P5-201ENST00000383890 115 ntBASIC-4.03□□□□□ -3.05
TRAV1-2A0A0B4J238 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.03□□□□□ -3.05
TRAV1-2A0A0B4J238 MIR3938-201ENST00000582157 103 ntBASIC-4.03□□□□□ -3.05
TRAV1-2A0A0B4J238 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-4.04□□□□□ -3.06
TRAV1-2A0A0B4J238 MIR5588-201ENST00000581890 63 ntBASIC-4.04□□□□□ -3.06
TRAV1-2A0A0B4J238 MIR488-201ENST00000365739 83 ntBASIC-4.05□□□□□ -3.06
TRAV1-2A0A0B4J238 AL031737.1-201ENST00000450125 223 ntBASIC-4.05□□□□□ -3.06
TRAV1-2A0A0B4J238 RNU6-379P-201ENST00000363813 104 ntBASIC-4.06□□□□□ -3.06
TRAV1-2A0A0B4J238 RNU6-979P-201ENST00000383896 107 ntBASIC-4.06□□□□□ -3.06
TRAV1-2A0A0B4J238 RNU6-663P-201ENST00000391105 106 ntBASIC-4.06□□□□□ -3.06
TRAV1-2A0A0B4J238 MIR548AH-201ENST00000637109 76 ntBASIC-4.06□□□□□ -3.06
TRAV1-2A0A0B4J238 SNORA25.4-201ENST00000363666 124 ntBASIC-4.07□□□□□ -3.06
TRAV1-2A0A0B4J238 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.07□□□□□ -3.06
TRAV1-2A0A0B4J238 AL117351.2-201ENST00000513571 157 ntBASIC-4.07□□□□□ -3.06
TRAV1-2A0A0B4J238 MIR548X-201ENST00000580069 75 ntBASIC-4.07□□□□□ -3.06
TRAV1-2A0A0B4J238 MIR450A1-201ENST00000362262 91 ntBASIC-4.08□□□□□ -3.06
TRAV1-2A0A0B4J238 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.08□□□□□ -3.06
TRAV1-2A0A0B4J238 SNORD115.2-201ENST00000391126 59 ntBASIC-4.08□□□□□ -3.06
TRAV1-2A0A0B4J238 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.09□□□□□ -3.06
TRAV1-2A0A0B4J238 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.09□□□□□ -3.06
TRAV1-2A0A0B4J238 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.1□□□□□ -3.07
TRAV1-2A0A0B4J238 IGLL4P-201ENST00000614590 133 ntBASIC-4.1□□□□□ -3.07
TRAV1-2A0A0B4J238 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.11□□□□□ -3.07
TRAV1-2A0A0B4J238 RNU6-388P-201ENST00000517012 105 ntBASIC-4.11□□□□□ -3.07
TRAV1-2A0A0B4J238 RNU6-389P-201ENST00000517048 105 ntBASIC-4.11□□□□□ -3.07
TRAV1-2A0A0B4J238 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.12□□□□□ -3.07
TRAV1-2A0A0B4J238 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.12□□□□□ -3.07
TRAV1-2A0A0B4J238 RNU6-634P-201ENST00000459134 106 ntBASIC-4.12□□□□□ -3.07
TRAV1-2A0A0B4J238 RNU7-171P-201ENST00000459581 62 ntBASIC-4.12□□□□□ -3.07
TRAV1-2A0A0B4J238 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.13□□□□□ -3.07
TRAV1-2A0A0B4J238 MIR4511-201ENST00000582784 87 ntBASIC-4.14□□□□□ -3.07
TRAV1-2A0A0B4J238 MIR548H4-201ENST00000408689 111 ntBASIC-4.16□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-640P-201ENST00000363693 105 ntBASIC-4.18□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.18□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-959P-201ENST00000384671 107 ntBASIC-4.18□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-788P-201ENST00000390967 104 ntBASIC-4.18□□□□□ -3.08
TRAV1-2A0A0B4J238 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.18□□□□□ -3.08
TRAV1-2A0A0B4J238 AC103706.3-201ENST00000636297 85 ntBASIC-4.18□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.19□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.2□□□□□ -3.08
TRAV1-2A0A0B4J238 RNY4P13-201ENST00000384284 96 ntBASIC-4.2□□□□□ -3.08
TRAV1-2A0A0B4J238 RNU6-776P-201ENST00000364403 104 ntBASIC-4.23□□□□□ -3.09
TRAV1-2A0A0B4J238 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.23□□□□□ -3.09
TRAV1-2A0A0B4J238 AC008267.6-201ENST00000441664 139 ntBASIC-4.23□□□□□ -3.09
TRAV1-2A0A0B4J238 SNORD30.1-201ENST00000391309 70 ntBASIC-4.25□□□□□ -3.09
TRAV1-2A0A0B4J238 U7.4-201ENST00000614961 63 ntBASIC-4.25□□□□□ -3.09
TRAV1-2A0A0B4J238 RNU6-422P-201ENST00000384632 107 ntBASIC-4.29□□□□□ -3.1
TRAV1-2A0A0B4J238 MT-TG-201ENST00000387429 68 ntBASIC-4.3□□□□□ -3.1
TRAV1-2A0A0B4J238 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.3□□□□□ -3.1
TRAV1-2A0A0B4J238 MIR545-201ENST00000385085 106 ntBASIC-4.31□□□□□ -3.1
TRAV1-2A0A0B4J238 RNU6-327P-201ENST00000516270 127 ntBASIC-4.31□□□□□ -3.1
TRAV1-2A0A0B4J238 MIR4666B-201ENST00000578142 81 ntBASIC-4.31□□□□□ -3.1
TRAV1-2A0A0B4J238 MIR548AL-201ENST00000578416 97 ntBASIC-4.31□□□□□ -3.1
TRAV1-2A0A0B4J238 AL365222.1-201ENST00000614661 98 ntBASIC-4.32□□□□□ -3.1
TRAV1-2A0A0B4J238 RNU6-463P-201ENST00000384340 107 ntBASIC-4.34□□□□□ -3.1
TRAV1-2A0A0B4J238 AC110620.1-201ENST00000416042 228 ntBASIC-4.34□□□□□ -3.1
TRAV1-2A0A0B4J238 U6.111-201ENST00000636093 83 ntBASIC-4.34□□□□□ -3.1
TRAV1-2A0A0B4J238 RNU6-32P-201ENST00000383948 107 ntBASIC-4.35□□□□□ -3.11
TRAV1-2A0A0B4J238 RNU6-13P-201ENST00000384248 107 ntBASIC-4.35□□□□□ -3.11
TRAV1-2A0A0B4J238 RNU6-12P-201ENST00000384604 107 ntBASIC-4.35□□□□□ -3.11
TRAV1-2A0A0B4J238 RNU6-41P-201ENST00000384741 107 ntBASIC-4.35□□□□□ -3.11
TRAV1-2A0A0B4J238 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.36□□□□□ -3.11
TRAV1-2A0A0B4J238 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-4.36□□□□□ -3.11
TRAV1-2A0A0B4J238 RNU6-539P-201ENST00000516665 103 ntBASIC-4.38□□□□□ -3.11
TRAV1-2A0A0B4J238 MIR4679-1-201ENST00000637619 75 ntBASIC-4.38□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms