Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-380P-201ENST00000410207 107 ntBASIC-2.83□□□□□ -2.86
HLA-DMBP28068 RNU6-255P-201ENST00000516957 105 ntBASIC-2.83□□□□□ -2.86
HLA-DMBP28068 SNORD113-3-201ENST00000364830 72 ntBASIC-2.84□□□□□ -2.86
HLA-DMBP28068 SNORD60-201ENST00000383903 83 ntBASIC-2.84□□□□□ -2.86
HLA-DMBP28068 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.84□□□□□ -2.86
HLA-DMBP28068 RNU6-974P-201ENST00000384099 108 ntBASIC-2.84□□□□□ -2.86
HLA-DMBP28068 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.84□□□□□ -2.86
HLA-DMBP28068 RNU6-267P-201ENST00000516714 103 ntBASIC-2.84□□□□□ -2.86
HLA-DMBP28068 RNU6-907P-201ENST00000390924 102 ntBASIC-2.85□□□□□ -2.87
HLA-DMBP28068 MIR548N-201ENST00000408742 75 ntBASIC-2.85□□□□□ -2.87
HLA-DMBP28068 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.85□□□□□ -2.87
HLA-DMBP28068 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.86□□□□□ -2.87
HLA-DMBP28068 MIR202-201ENST00000362219 110 ntBASIC-2.87□□□□□ -2.87
HLA-DMBP28068 RNU6-694P-201ENST00000364071 147 ntBASIC-2.87□□□□□ -2.87
HLA-DMBP28068 RNU6-520P-201ENST00000384717 104 ntBASIC-2.87□□□□□ -2.87
HLA-DMBP28068 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.87□□□□□ -2.87
HLA-DMBP28068 RNU7-160P-201ENST00000516660 62 ntBASIC-2.87□□□□□ -2.87
HLA-DMBP28068 RNU6-649P-201ENST00000384463 107 ntBASIC-2.88□□□□□ -2.87
HLA-DMBP28068 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.88□□□□□ -2.87
HLA-DMBP28068 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.89□□□□□ -2.87
HLA-DMBP28068 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.89□□□□□ -2.87
HLA-DMBP28068 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.9□□□□□ -2.87
HLA-DMBP28068 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.91□□□□□ -2.88
HLA-DMBP28068 MALAT1.1-201ENST00000618249 95 ntBASIC-2.91□□□□□ -2.88
HLA-DMBP28068 RNU6-589P-201ENST00000516485 107 ntBASIC-2.92□□□□□ -2.88
HLA-DMBP28068 RNU6-789P-201ENST00000517105 102 ntBASIC-2.92□□□□□ -2.88
HLA-DMBP28068 AC006160.2-201ENST00000637708 154 ntBASIC-2.92□□□□□ -2.88
HLA-DMBP28068 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.93□□□□□ -2.88
HLA-DMBP28068 MIR664A-201ENST00000626086 82 ntBASIC-2.93□□□□□ -2.88
HLA-DMBP28068 RNU6-834P-201ENST00000362367 110 ntBASIC-2.94□□□□□ -2.88
HLA-DMBP28068 RNU6-315P-201ENST00000362666 107 ntBASIC-2.94□□□□□ -2.88
HLA-DMBP28068 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.94□□□□□ -2.88
HLA-DMBP28068 RNU6-828P-201ENST00000364876 107 ntBASIC-2.94□□□□□ -2.88
HLA-DMBP28068 AP001318.4-201ENST00000616637 121 ntBASIC-2.94□□□□□ -2.88
HLA-DMBP28068 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.94□□□□□ -2.88
HLA-DMBP28068 RNU6-675P-201ENST00000384236 104 ntBASIC-2.95□□□□□ -2.88
HLA-DMBP28068 SNORA17.4-201ENST00000391287 132 ntBASIC-2.95□□□□□ -2.88
HLA-DMBP28068 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.95□□□□□ -2.88
HLA-DMBP28068 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.96□□□□□ -2.88
HLA-DMBP28068 SNORD116-24-201ENST00000384549 92 ntBASIC-2.96□□□□□ -2.88
HLA-DMBP28068 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.98□□□□□ -2.89
HLA-DMBP28068 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.98□□□□□ -2.89
HLA-DMBP28068 RNU6-361P-201ENST00000364454 107 ntBASIC-2.98□□□□□ -2.89
HLA-DMBP28068 SNORA40.13-201ENST00000516379 120 ntBASIC-2.98□□□□□ -2.89
HLA-DMBP28068 RNU6-912P-201ENST00000363800 104 ntBASIC-2.99□□□□□ -2.89
HLA-DMBP28068 MIR379-201ENST00000362218 67 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 RNU6-1241P-201ENST00000384536 107 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 Y_RNA.607-201ENST00000410597 98 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 AC008267.6-201ENST00000441664 139 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 AL031737.1-201ENST00000450125 223 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 RNU6-92P-201ENST00000605893 104 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 MIR7110-201ENST00000612638 86 ntBASIC-3□□□□□ -2.89
HLA-DMBP28068 RNU6-542P-201ENST00000516405 103 ntBASIC-3.01□□□□□ -2.89
HLA-DMBP28068 RNU6-68P-201ENST00000516576 104 ntBASIC-3.01□□□□□ -2.89
HLA-DMBP28068 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.02□□□□□ -2.89
HLA-DMBP28068 RNU6-895P-201ENST00000384125 103 ntBASIC-3.03□□□□□ -2.89
HLA-DMBP28068 RNU6-530P-201ENST00000391180 107 ntBASIC-3.03□□□□□ -2.89
HLA-DMBP28068 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.03□□□□□ -2.89
HLA-DMBP28068 MIR548AI-201ENST00000579940 88 ntBASIC-3.03□□□□□ -2.89
HLA-DMBP28068 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.04□□□□□ -2.9
HLA-DMBP28068 RNU6-959P-201ENST00000384671 107 ntBASIC-3.04□□□□□ -2.9
HLA-DMBP28068 MIR450A1-201ENST00000362262 91 ntBASIC-3.05□□□□□ -2.9
HLA-DMBP28068 MIR154-201ENST00000385243 84 ntBASIC-3.05□□□□□ -2.9
HLA-DMBP28068 Y_RNA.709-201ENST00000516952 92 ntBASIC-3.06□□□□□ -2.9
HLA-DMBP28068 RNU6-810P-201ENST00000364001 107 ntBASIC-3.07□□□□□ -2.9
HLA-DMBP28068 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.07□□□□□ -2.9
HLA-DMBP28068 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.07□□□□□ -2.9
HLA-DMBP28068 RNU6-844P-201ENST00000517175 102 ntBASIC-3.07□□□□□ -2.9
HLA-DMBP28068 SNORD60.1-201ENST00000362451 73 ntBASIC-3.08□□□□□ -2.9
HLA-DMBP28068 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.08□□□□□ -2.9
HLA-DMBP28068 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.08□□□□□ -2.9
HLA-DMBP28068 RNU6-231P-201ENST00000517122 103 ntBASIC-3.08□□□□□ -2.9
HLA-DMBP28068 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.09□□□□□ -2.9
HLA-DMBP28068 RNU6-70P-201ENST00000516438 60 ntBASIC-3.09□□□□□ -2.9
HLA-DMBP28068 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.1□□□□□ -2.91
HLA-DMBP28068 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.1□□□□□ -2.91
HLA-DMBP28068 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 MIR488-201ENST00000365739 83 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 MIR1254-1-201ENST00000408257 97 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 AL731768.1-201ENST00000603124 139 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 AL365222.1-201ENST00000614661 98 ntBASIC-3.11□□□□□ -2.91
HLA-DMBP28068 RNU6-803P-201ENST00000516034 102 ntBASIC-3.12□□□□□ -2.91
HLA-DMBP28068 MIR5693-201ENST00000577722 73 ntBASIC-3.12□□□□□ -2.91
HLA-DMBP28068 MIR4426-201ENST00000640330 63 ntBASIC-3.12□□□□□ -2.91
HLA-DMBP28068 RNY4P25-201ENST00000459254 96 ntBASIC-3.13□□□□□ -2.91
HLA-DMBP28068 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.13□□□□□ -2.91
HLA-DMBP28068 SNORA40B-201ENST00000385573 128 ntBASIC-3.14□□□□□ -2.91
HLA-DMBP28068 SNORD116.2-201ENST00000391251 93 ntBASIC-3.14□□□□□ -2.91
HLA-DMBP28068 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.14□□□□□ -2.91
HLA-DMBP28068 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.15□□□□□ -2.91
HLA-DMBP28068 RNU6-590P-201ENST00000365039 107 ntBASIC-3.15□□□□□ -2.91
HLA-DMBP28068 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.16□□□□□ -2.92
HLA-DMBP28068 RNU6-300P-201ENST00000459080 104 ntBASIC-3.16□□□□□ -2.92
HLA-DMBP28068 SNORD45.2-201ENST00000363552 72 ntBASIC-3.17□□□□□ -2.92
HLA-DMBP28068 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.17□□□□□ -2.92
HLA-DMBP28068 MIR3133-201ENST00000583157 78 ntBASIC-3.17□□□□□ -2.92
HLA-DMBP28068 RNU6-640P-201ENST00000363693 105 ntBASIC-3.18□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms