Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SNORD18.1-201ENST00000363807 70 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 RNU6-411P-201ENST00000384451 107 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 U7.4-201ENST00000614961 63 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 MIR6874-201ENST00000635894 71 ntBASIC-1.41□□□□□ -2.64
PDGFBP01127 MIR29B1-201ENST00000385015 81 ntBASIC-1.42□□□□□ -2.64
PDGFBP01127 MIR579-201ENST00000385221 98 ntBASIC-1.42□□□□□ -2.64
PDGFBP01127 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.42□□□□□ -2.64
PDGFBP01127 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNA5SP93-201ENST00000362525 114 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNU6-228P-201ENST00000362700 106 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.43□□□□□ -2.64
PDGFBP01127 RNU6-247P-201ENST00000362636 107 ntBASIC-1.44□□□□□ -2.64
PDGFBP01127 SNORD1B-201ENST00000363091 84 ntBASIC-1.44□□□□□ -2.64
PDGFBP01127 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
PDGFBP01127 RNU6-164P-201ENST00000364604 103 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 MIR548AA1-201ENST00000384971 97 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 AC091912.2-201ENST00000624798 167 ntBASIC-1.45□□□□□ -2.64
PDGFBP01127 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 SNORA26.2-201ENST00000390922 122 ntBASIC-1.46□□□□□ -2.64
PDGFBP01127 RNU6-608P-201ENST00000383927 104 ntBASIC-1.47□□□□□ -2.64
PDGFBP01127 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
PDGFBP01127 RNU6-995P-201ENST00000391244 107 ntBASIC-1.47□□□□□ -2.64
PDGFBP01127 MIR3170-201ENST00000582699 77 ntBASIC-1.47□□□□□ -2.64
PDGFBP01127 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.47□□□□□ -2.64
PDGFBP01127 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 MIR1255A-201ENST00000408338 113 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 RNY4P29-201ENST00000410801 97 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 RNU6-172P-201ENST00000411000 93 ntBASIC-1.48□□□□□ -2.65
PDGFBP01127 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 MIR487B-201ENST00000385021 84 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 RNU6-542P-201ENST00000516405 103 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 RNU7-151P-201ENST00000516930 53 ntBASIC-1.49□□□□□ -2.65
PDGFBP01127 RNA5SP86-201ENST00000390869 98 ntBASIC-1.5□□□□□ -2.65
PDGFBP01127 RNU6-663P-201ENST00000391105 106 ntBASIC-1.5□□□□□ -2.65
PDGFBP01127 AC018880.2-201ENST00000414265 201 ntBASIC-1.5□□□□□ -2.65
PDGFBP01127 RNU6-92P-201ENST00000605893 104 ntBASIC-1.51□□□□□ -2.65
PDGFBP01127 MIR3202-2-201ENST00000635980 79 ntBASIC-1.51□□□□□ -2.65
PDGFBP01127 SNORD30.1-201ENST00000391309 70 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 MIR548H1-201ENST00000408610 102 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 MIR6502-201ENST00000617296 76 ntBASIC-1.52□□□□□ -2.65
PDGFBP01127 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.53□□□□□ -2.65
PDGFBP01127 RNY4P7-201ENST00000364600 96 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 RNU6-634P-201ENST00000459134 106 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.54□□□□□ -2.66
PDGFBP01127 MIR3139-201ENST00000579145 76 ntBASIC-1.55□□□□□ -2.66
PDGFBP01127 RNU6-857P-201ENST00000515893 110 ntBASIC-1.56□□□□□ -2.66
PDGFBP01127 SNORD63.2-201ENST00000516303 64 ntBASIC-1.56□□□□□ -2.66
PDGFBP01127 RNU6-258P-201ENST00000390884 101 ntBASIC-1.57□□□□□ -2.66
PDGFBP01127 MIR4756-201ENST00000577874 78 ntBASIC-1.57□□□□□ -2.66
PDGFBP01127 SNORD60.1-201ENST00000362451 73 ntBASIC-1.58□□□□□ -2.66
PDGFBP01127 RNA5SP225-201ENST00000410874 135 ntBASIC-1.58□□□□□ -2.66
PDGFBP01127 RNU6-980P-201ENST00000516925 103 ntBASIC-1.58□□□□□ -2.66
PDGFBP01127 SNORD54-201ENST00000459159 67 ntBASIC-1.59□□□□□ -2.66
PDGFBP01127 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.59□□□□□ -2.66
PDGFBP01127 MT-TM-201ENST00000387377 68 ntBASIC-1.6□□□□□ -2.67
PDGFBP01127 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 RNU6-669P-201ENST00000365575 107 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 SNORD116.2-201ENST00000391251 93 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 AC108019.1-201ENST00000512540 175 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 MIR7978-201ENST00000636158 59 ntBASIC-1.61□□□□□ -2.67
PDGFBP01127 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.62□□□□□ -2.67
PDGFBP01127 AC120024.2-201ENST00000576526 175 ntBASIC-1.62□□□□□ -2.67
PDGFBP01127 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.63□□□□□ -2.67
PDGFBP01127 SNORD78.1-201ENST00000390866 65 ntBASIC-1.63□□□□□ -2.67
PDGFBP01127 RNU6-871P-201ENST00000516122 100 ntBASIC-1.63□□□□□ -2.67
PDGFBP01127 RNU6-649P-201ENST00000384463 107 ntBASIC-1.64□□□□□ -2.67
PDGFBP01127 RNU6-523P-201ENST00000516304 54 ntBASIC-1.64□□□□□ -2.67
PDGFBP01127 MIR7110-201ENST00000612638 86 ntBASIC-1.64□□□□□ -2.67
PDGFBP01127 RNU6-563P-201ENST00000364872 108 ntBASIC-1.65□□□□□ -2.67
PDGFBP01127 RNU6-974P-201ENST00000384099 108 ntBASIC-1.65□□□□□ -2.67
PDGFBP01127 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.65□□□□□ -2.67
PDGFBP01127 SNORA25.4-201ENST00000363666 124 ntBASIC-1.66□□□□□ -2.68
PDGFBP01127 RNU6-810P-201ENST00000364001 107 ntBASIC-1.66□□□□□ -2.68
PDGFBP01127 RNU6-279P-201ENST00000391297 101 ntBASIC-1.66□□□□□ -2.68
PDGFBP01127 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 SNORA25.5-201ENST00000363782 126 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 RNU6-231P-201ENST00000517122 103 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 MIR23C-201ENST00000579846 100 ntBASIC-1.67□□□□□ -2.68
PDGFBP01127 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.68□□□□□ -2.68
PDGFBP01127 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.68□□□□□ -2.68
PDGFBP01127 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.69□□□□□ -2.68
PDGFBP01127 RNY4-201ENST00000516507 96 ntBASIC-1.69□□□□□ -2.68
PDGFBP01127 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.69□□□□□ -2.68
PDGFBP01127 RNU6-79P-201ENST00000362511 107 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 AC005520.4-201ENST00000604337 90 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 U6.111-201ENST00000636093 83 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 U6.97-201ENST00000636904 101 ntBASIC-1.7□□□□□ -2.68
PDGFBP01127 MIR4679-1-201ENST00000637619 75 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms