Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-400P-201ENST00000391173 106 ntBASIC-1.86□□□□□ -2.71
PDLIM1O00151 RNU6-172P-201ENST00000411000 93 ntBASIC-1.86□□□□□ -2.71
PDLIM1O00151 U7.4-201ENST00000614961 63 ntBASIC-1.86□□□□□ -2.71
PDLIM1O00151 RNU6-79P-201ENST00000362511 107 ntBASIC-1.87□□□□□ -2.71
PDLIM1O00151 RNU6-92P-201ENST00000605893 104 ntBASIC-1.88□□□□□ -2.71
PDLIM1O00151 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.89□□□□□ -2.71
PDLIM1O00151 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
PDLIM1O00151 AC062037.1-201ENST00000605302 128 ntBASIC-1.9□□□□□ -2.71
PDLIM1O00151 AC120024.2-201ENST00000576526 175 ntBASIC-1.91□□□□□ -2.72
PDLIM1O00151 RNU6-226P-201ENST00000363778 107 ntBASIC-1.92□□□□□ -2.72
PDLIM1O00151 SNORD63.2-201ENST00000516303 64 ntBASIC-1.92□□□□□ -2.72
PDLIM1O00151 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.92□□□□□ -2.72
PDLIM1O00151 RNU6-258P-201ENST00000390884 101 ntBASIC-1.94□□□□□ -2.72
PDLIM1O00151 MIR1246-201ENST00000636535 73 ntBASIC-1.94□□□□□ -2.72
PDLIM1O00151 RNU6-669P-201ENST00000365575 107 ntBASIC-1.95□□□□□ -2.72
PDLIM1O00151 MIR7978-201ENST00000636158 59 ntBASIC-1.95□□□□□ -2.72
PDLIM1O00151 SNORA27.2-201ENST00000363365 126 ntBASIC-1.96□□□□□ -2.72
PDLIM1O00151 RNU6-663P-201ENST00000391105 106 ntBASIC-1.96□□□□□ -2.72
PDLIM1O00151 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.96□□□□□ -2.72
PDLIM1O00151 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.97□□□□□ -2.72
PDLIM1O00151 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.97□□□□□ -2.72
PDLIM1O00151 MIR1207-201ENST00000408249 87 ntBASIC-1.97□□□□□ -2.72
PDLIM1O00151 RNU6-634P-201ENST00000459134 106 ntBASIC-1.98□□□□□ -2.73
PDLIM1O00151 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.98□□□□□ -2.73
PDLIM1O00151 SNORD60.1-201ENST00000362451 73 ntBASIC-1.99□□□□□ -2.73
PDLIM1O00151 RNU6-563P-201ENST00000364872 108 ntBASIC-1.99□□□□□ -2.73
PDLIM1O00151 MIR3202-2-201ENST00000635980 79 ntBASIC-1.99□□□□□ -2.73
PDLIM1O00151 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.99□□□□□ -2.73
PDLIM1O00151 RNU6-540P-201ENST00000384622 101 ntBASIC-2□□□□□ -2.73
PDLIM1O00151 MIR7110-201ENST00000612638 86 ntBASIC-2□□□□□ -2.73
PDLIM1O00151 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.01□□□□□ -2.73
PDLIM1O00151 RNA5SP170-201ENST00000517150 101 ntBASIC-2.01□□□□□ -2.73
PDLIM1O00151 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.01□□□□□ -2.73
PDLIM1O00151 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.01□□□□□ -2.73
PDLIM1O00151 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.02□□□□□ -2.73
PDLIM1O00151 MIR125B1-201ENST00000385236 88 ntBASIC-2.02□□□□□ -2.73
PDLIM1O00151 RNU6-695P-201ENST00000391157 104 ntBASIC-2.02□□□□□ -2.73
PDLIM1O00151 MIR548H1-201ENST00000408610 102 ntBASIC-2.02□□□□□ -2.73
PDLIM1O00151 SNORD73B-201ENST00000364394 72 ntBASIC-2.03□□□□□ -2.73
PDLIM1O00151 SNORD30.1-201ENST00000391309 70 ntBASIC-2.03□□□□□ -2.73
PDLIM1O00151 RNU7-160P-201ENST00000516660 62 ntBASIC-2.03□□□□□ -2.73
PDLIM1O00151 RNU6-523P-201ENST00000516304 54 ntBASIC-2.04□□□□□ -2.74
PDLIM1O00151 RNY4P27-201ENST00000363341 96 ntBASIC-2.06□□□□□ -2.74
PDLIM1O00151 SNORA25.4-201ENST00000363666 124 ntBASIC-2.06□□□□□ -2.74
PDLIM1O00151 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.06□□□□□ -2.74
PDLIM1O00151 SNORD116.2-201ENST00000391251 93 ntBASIC-2.06□□□□□ -2.74
PDLIM1O00151 RNU6-871P-201ENST00000516122 100 ntBASIC-2.06□□□□□ -2.74
PDLIM1O00151 RNU6-231P-201ENST00000517122 103 ntBASIC-2.06□□□□□ -2.74
PDLIM1O00151 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 RNU6-810P-201ENST00000364001 107 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 RNU6-573P-201ENST00000383938 106 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 RNA5SP86-201ENST00000390869 98 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.07□□□□□ -2.74
PDLIM1O00151 SNORA25.5-201ENST00000363782 126 ntBASIC-2.08□□□□□ -2.74
PDLIM1O00151 RNU6-828P-201ENST00000364876 107 ntBASIC-2.08□□□□□ -2.74
PDLIM1O00151 RNU6-974P-201ENST00000384099 108 ntBASIC-2.08□□□□□ -2.74
PDLIM1O00151 SNORA26.2-201ENST00000390922 122 ntBASIC-2.08□□□□□ -2.74
PDLIM1O00151 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.09□□□□□ -2.74
PDLIM1O00151 MIR1255A-201ENST00000408338 113 ntBASIC-2.09□□□□□ -2.74
PDLIM1O00151 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 RNU6-649P-201ENST00000384463 107 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 RNY3P8-201ENST00000411366 126 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 RNU6-857P-201ENST00000515893 110 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 AC005520.4-201ENST00000604337 90 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 AC013734.1-201ENST00000619329 111 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 U6.97-201ENST00000636904 101 ntBASIC-2.11□□□□□ -2.75
PDLIM1O00151 RNY4P29-201ENST00000410801 97 ntBASIC-2.12□□□□□ -2.75
PDLIM1O00151 RNU6-122P-201ENST00000516818 107 ntBASIC-2.12□□□□□ -2.75
PDLIM1O00151 RNU6-228P-201ENST00000362700 106 ntBASIC-2.13□□□□□ -2.75
PDLIM1O00151 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.13□□□□□ -2.75
PDLIM1O00151 RNU6-520P-201ENST00000384717 104 ntBASIC-2.14□□□□□ -2.75
PDLIM1O00151 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.15□□□□□ -2.75
PDLIM1O00151 MIR3123-201ENST00000583417 75 ntBASIC-2.15□□□□□ -2.75
PDLIM1O00151 SNORD18.1-201ENST00000363807 70 ntBASIC-2.16□□□□□ -2.76
PDLIM1O00151 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.16□□□□□ -2.76
PDLIM1O00151 RNU6-279P-201ENST00000391297 101 ntBASIC-2.16□□□□□ -2.76
PDLIM1O00151 RNU7-119P-201ENST00000459279 63 ntBASIC-2.16□□□□□ -2.76
PDLIM1O00151 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.17□□□□□ -2.76
PDLIM1O00151 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.17□□□□□ -2.76
PDLIM1O00151 SNORA40B-201ENST00000385573 128 ntBASIC-2.17□□□□□ -2.76
PDLIM1O00151 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.18□□□□□ -2.76
PDLIM1O00151 U6.111-201ENST00000636093 83 ntBASIC-2.18□□□□□ -2.76
PDLIM1O00151 MIR487B-201ENST00000385021 84 ntBASIC-2.19□□□□□ -2.76
PDLIM1O00151 RNU6-983P-201ENST00000516004 103 ntBASIC-2.19□□□□□ -2.76
PDLIM1O00151 RNU6-539P-201ENST00000516665 103 ntBASIC-2.19□□□□□ -2.76
PDLIM1O00151 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.2□□□□□ -2.76
PDLIM1O00151 RNU6-841P-201ENST00000383872 107 ntBASIC-2.2□□□□□ -2.76
PDLIM1O00151 MIR4511-201ENST00000582784 87 ntBASIC-2.2□□□□□ -2.76
PDLIM1O00151 AC103706.3-201ENST00000636297 85 ntBASIC-2.2□□□□□ -2.76
PDLIM1O00151 MIR4679-1-201ENST00000637619 75 ntBASIC-2.2□□□□□ -2.76
PDLIM1O00151 RNU6-940P-201ENST00000363433 104 ntBASIC-2.21□□□□□ -2.76
PDLIM1O00151 SNORD60-201ENST00000383903 83 ntBASIC-2.21□□□□□ -2.76
PDLIM1O00151 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.21□□□□□ -2.76
PDLIM1O00151 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.22□□□□□ -2.76
PDLIM1O00151 SNORD78.1-201ENST00000390866 65 ntBASIC-2.23□□□□□ -2.77
PDLIM1O00151 SNORD45.2-201ENST00000363552 72 ntBASIC-2.24□□□□□ -2.77
PDLIM1O00151 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.24□□□□□ -2.77
PDLIM1O00151 MIR202-201ENST00000362219 110 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms