Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNA5SP224-201ENST00000365069 126 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 SNORA40.4-201ENST00000390971 128 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-887P-201ENST00000410660 100 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 AC074348.1-201ENST00000426503 132 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.69□□□□□ -2.68
COL6A3P12111 RNU6-422P-201ENST00000384632 107 ntBASIC-1.7□□□□□ -2.68
COL6A3P12111 MIR4282-201ENST00000583613 67 ntBASIC-1.7□□□□□ -2.68
COL6A3P12111 U2.14-201ENST00000615943 113 ntBASIC-1.7□□□□□ -2.68
COL6A3P12111 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.7□□□□□ -2.68
COL6A3P12111 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.71□□□□□ -2.68
COL6A3P12111 RNU6-940P-201ENST00000363433 104 ntBASIC-1.71□□□□□ -2.68
COL6A3P12111 RNU6-956P-201ENST00000458868 103 ntBASIC-1.71□□□□□ -2.68
COL6A3P12111 MIR548AI-201ENST00000579940 88 ntBASIC-1.71□□□□□ -2.68
COL6A3P12111 MIR664A-201ENST00000626086 82 ntBASIC-1.71□□□□□ -2.68
COL6A3P12111 U7.2-201ENST00000607576 63 ntBASIC-1.71□□□□□ -2.68
COL6A3P12111 MIR154-201ENST00000385243 84 ntBASIC-1.72□□□□□ -2.68
COL6A3P12111 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.72□□□□□ -2.68
COL6A3P12111 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.72□□□□□ -2.69
COL6A3P12111 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.72□□□□□ -2.69
COL6A3P12111 MIR4643-201ENST00000577473 78 ntBASIC-1.72□□□□□ -2.69
COL6A3P12111 RNU6-275P-201ENST00000364910 107 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 SNORD115-45-201ENST00000391078 81 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 RNU6-918P-201ENST00000391219 106 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 RNU6-70P-201ENST00000516438 60 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 AP001340.1-201ENST00000624405 217 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 RNU6-904P-201ENST00000516206 101 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 SNORD115.2-201ENST00000391126 59 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 RNU6-988P-201ENST00000519081 107 ntBASIC-1.73□□□□□ -2.69
COL6A3P12111 SNORA40.16-201ENST00000517238 121 ntBASIC-1.74□□□□□ -2.69
COL6A3P12111 RNU6-450P-201ENST00000364654 107 ntBASIC-1.74□□□□□ -2.69
COL6A3P12111 RNU6-402P-201ENST00000410678 103 ntBASIC-1.74□□□□□ -2.69
COL6A3P12111 AL158147.1-201ENST00000443970 75 ntBASIC-1.74□□□□□ -2.69
COL6A3P12111 RNU4-71P-201ENST00000516258 113 ntBASIC-1.74□□□□□ -2.69
COL6A3P12111 MIR4668-201ENST00000582284 70 ntBASIC-1.74□□□□□ -2.69
COL6A3P12111 RNU6-231P-201ENST00000517122 103 ntBASIC-1.75□□□□□ -2.69
COL6A3P12111 MIR656-201ENST00000385224 78 ntBASIC-1.75□□□□□ -2.69
COL6A3P12111 MIR124-1-201ENST00000385275 85 ntBASIC-1.75□□□□□ -2.69
COL6A3P12111 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.75□□□□□ -2.69
COL6A3P12111 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.75□□□□□ -2.69
COL6A3P12111 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.76□□□□□ -2.69
COL6A3P12111 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.76□□□□□ -2.69
COL6A3P12111 RNU6-574P-201ENST00000384265 107 ntBASIC-1.76□□□□□ -2.69
COL6A3P12111 RNU6-876P-201ENST00000391295 104 ntBASIC-1.76□□□□□ -2.69
COL6A3P12111 RNU6-584P-201ENST00000410350 95 ntBASIC-1.76□□□□□ -2.69
COL6A3P12111 SNORA63.4-201ENST00000362763 126 ntBASIC-1.77□□□□□ -2.69
COL6A3P12111 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.77□□□□□ -2.69
COL6A3P12111 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.77□□□□□ -2.69
COL6A3P12111 RNU6-419P-201ENST00000517030 63 ntBASIC-1.77□□□□□ -2.69
COL6A3P12111 RNU6-633P-201ENST00000362612 103 ntBASIC-1.77□□□□□ -2.69
COL6A3P12111 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.77□□□□□ -2.69
COL6A3P12111 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.78□□□□□ -2.69
COL6A3P12111 SNORA25.5-201ENST00000363782 126 ntBASIC-1.78□□□□□ -2.69
COL6A3P12111 RNU6-506P-201ENST00000516553 94 ntBASIC-1.78□□□□□ -2.69
COL6A3P12111 SNORD58.1-201ENST00000391313 66 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 MTATP8P2-201ENST00000435212 202 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 AC113195.1-201ENST00000579952 141 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 AC072026.1-201ENST00000605023 201 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 MIR8062-201ENST00000621515 85 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 MIR2052-201ENST00000636055 55 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
COL6A3P12111 RNU6-788P-201ENST00000390967 104 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 RNU6-659P-201ENST00000516454 104 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 AC090582.1-201ENST00000636321 199 ntBASIC-1.79□□□□□ -2.7
COL6A3P12111 RNU6-776P-201ENST00000364403 104 ntBASIC-1.8□□□□□ -2.7
COL6A3P12111 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.8□□□□□ -2.7
COL6A3P12111 RNU6-718P-201ENST00000516166 105 ntBASIC-1.8□□□□□ -2.7
COL6A3P12111 RNU6-915P-201ENST00000364943 103 ntBASIC-1.81□□□□□ -2.7
COL6A3P12111 MIR4801-201ENST00000582704 82 ntBASIC-1.81□□□□□ -2.7
COL6A3P12111 AC006160.2-201ENST00000637708 154 ntBASIC-1.81□□□□□ -2.7
COL6A3P12111 SNORD58C-201ENST00000365223 64 ntBASIC-1.81□□□□□ -2.7
COL6A3P12111 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.81□□□□□ -2.7
COL6A3P12111 U7.3-201ENST00000616123 62 ntBASIC-1.81□□□□□ -2.7
COL6A3P12111 SNORD45C-201ENST00000383893 79 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 SNORD116-4-201ENST00000384733 96 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 SNORA19-201ENST00000384737 128 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 MIR548H4-201ENST00000408689 111 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 RNU6-895P-201ENST00000384125 103 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 MIR620-201ENST00000385232 95 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.82□□□□□ -2.7
COL6A3P12111 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.82□□□□□ -2.7
COL6A3P12111 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.83□□□□□ -2.7
COL6A3P12111 MIR3688-2-201ENST00000636963 87 ntBASIC-1.83□□□□□ -2.7
COL6A3P12111 SNORD116-22-201ENST00000384430 92 ntBASIC-1.83□□□□□ -2.7
COL6A3P12111 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.83□□□□□ -2.7
COL6A3P12111 RNU6-772P-201ENST00000516042 105 ntBASIC-1.83□□□□□ -2.7
COL6A3P12111 RNU7-197P-201ENST00000458836 62 ntBASIC-1.84□□□□□ -2.7
COL6A3P12111 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.84□□□□□ -2.7
COL6A3P12111 MIR4484-201ENST00000582855 83 ntBASIC-1.84□□□□□ -2.7
COL6A3P12111 RNU6-411P-201ENST00000384451 107 ntBASIC-1.84□□□□□ -2.7
COL6A3P12111 RNU6-380P-201ENST00000410207 107 ntBASIC-1.84□□□□□ -2.7
COL6A3P12111 SNORA33.2-201ENST00000365413 134 ntBASIC-1.85□□□□□ -2.71
COL6A3P12111 SNORD116-24-201ENST00000384549 92 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 RNU6-713P-201ENST00000384761 107 ntBASIC-1.86□□□□□ -2.71
COL6A3P12111 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms