Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-182P-201ENST00000516970 105 ntBASIC-5.22□□□□□ -3.25
LINC00643Q86TS7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-5.22□□□□□ -3.25
LINC00643Q86TS7 SNORD114-13-201ENST00000364377 74 ntBASIC-5.23□□□□□ -3.25
LINC00643Q86TS7 RNU6-537P-201ENST00000517277 103 ntBASIC-5.23□□□□□ -3.25
LINC00643Q86TS7 RNU6-987P-201ENST00000384759 104 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 MIR1302-6-201ENST00000408466 90 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 MIR4643-201ENST00000577473 78 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 DNAJC19P2-201ENST00000593340 302 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 AL035470.1-201ENST00000622571 220 ntBASIC-5.24□□□□□ -3.25
LINC00643Q86TS7 Y_RNA.387-201ENST00000383918 102 ntBASIC-5.25□□□□□ -3.25
LINC00643Q86TS7 Y_RNA.554-201ENST00000384672 102 ntBASIC-5.25□□□□□ -3.25
LINC00643Q86TS7 SNORD116-10-201ENST00000363791 102 ntBASIC-5.26□□□□□ -3.25
LINC00643Q86TS7 Y_RNA.668-201ENST00000516233 93 ntBASIC-5.26□□□□□ -3.25
LINC00643Q86TS7 MIR4426-201ENST00000640330 63 ntBASIC-5.26□□□□□ -3.25
LINC00643Q86TS7 RNU6-239P-201ENST00000390990 99 ntBASIC-5.27□□□□□ -3.25
LINC00643Q86TS7 RNU6-176P-201ENST00000517196 105 ntBASIC-5.27□□□□□ -3.25
LINC00643Q86TS7 MIR4679-2-201ENST00000578358 77 ntBASIC-5.27□□□□□ -3.25
LINC00643Q86TS7 RNU6-590P-201ENST00000365039 107 ntBASIC-5.28□□□□□ -3.25
LINC00643Q86TS7 Y_RNA.320-201ENST00000365144 102 ntBASIC-5.28□□□□□ -3.25
LINC00643Q86TS7 Y_RNA.652-201ENST00000458902 102 ntBASIC-5.28□□□□□ -3.25
LINC00643Q86TS7 Y_RNA.210-201ENST00000364161 110 ntBASIC-5.29□□□□□ -3.26
LINC00643Q86TS7 RNU6-867P-201ENST00000364956 107 ntBASIC-5.29□□□□□ -3.26
LINC00643Q86TS7 RNU6-300P-201ENST00000459080 104 ntBASIC-5.29□□□□□ -3.26
LINC00643Q86TS7 RNU7-121P-201ENST00000516604 62 ntBASIC-5.29□□□□□ -3.26
LINC00643Q86TS7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-5.3□□□□□ -3.26
LINC00643Q86TS7 RNU6-460P-201ENST00000391158 108 ntBASIC-5.31□□□□□ -3.26
LINC00643Q86TS7 RNA5SP106-201ENST00000517274 100 ntBASIC-5.31□□□□□ -3.26
LINC00643Q86TS7 MIR3688-2-201ENST00000636963 87 ntBASIC-5.31□□□□□ -3.26
LINC00643Q86TS7 Y_RNA.96-201ENST00000363092 109 ntBASIC-5.32□□□□□ -3.26
LINC00643Q86TS7 AL158147.1-201ENST00000443970 75 ntBASIC-5.32□□□□□ -3.26
LINC00643Q86TS7 AC090971.5-201ENST00000621102 293 ntBASIC-5.32□□□□□ -3.26
LINC00643Q86TS7 SNORD115-37-201ENST00000363768 82 ntBASIC-5.33□□□□□ -3.26
LINC00643Q86TS7 RNU6-303P-201ENST00000517091 106 ntBASIC-5.33□□□□□ -3.26
LINC00643Q86TS7 MIR5009-201ENST00000578736 100 ntBASIC-5.34□□□□□ -3.26
LINC00643Q86TS7 RNY4P10-201ENST00000365571 96 ntBASIC-5.35□□□□□ -3.27
LINC00643Q86TS7 RNU6-1296P-201ENST00000383879 107 ntBASIC-5.35□□□□□ -3.27
LINC00643Q86TS7 Y_RNA.657-201ENST00000515983 102 ntBASIC-5.35□□□□□ -3.27
LINC00643Q86TS7 RNU2-16P-201ENST00000410712 136 ntBASIC-5.36□□□□□ -3.27
LINC00643Q86TS7 Y_RNA.384-201ENST00000383909 102 ntBASIC-5.37□□□□□ -3.27
LINC00643Q86TS7 Y_RNA.663-201ENST00000516043 101 ntBASIC-5.37□□□□□ -3.27
LINC00643Q86TS7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-5.38□□□□□ -3.27
LINC00643Q86TS7 RNU7-197P-201ENST00000458836 62 ntBASIC-5.38□□□□□ -3.27
LINC00643Q86TS7 Y_RNA.47-201ENST00000362697 108 ntBASIC-5.39□□□□□ -3.27
LINC00643Q86TS7 MIR519C-201ENST00000385053 87 ntBASIC-5.39□□□□□ -3.27
LINC00643Q86TS7 RNU6-1206P-201ENST00000516339 103 ntBASIC-5.39□□□□□ -3.27
LINC00643Q86TS7 Y_RNA.277-201ENST00000364754 102 ntBASIC-5.4□□□□□ -3.27
LINC00643Q86TS7 Y_RNA.649-201ENST00000459077 103 ntBASIC-5.41□□□□□ -3.28
LINC00643Q86TS7 RNU6-789P-201ENST00000517105 102 ntBASIC-5.41□□□□□ -3.28
LINC00643Q86TS7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-5.41□□□□□ -3.28
LINC00643Q86TS7 SNORD45.2-201ENST00000363552 72 ntBASIC-5.42□□□□□ -3.28
LINC00643Q86TS7 SNORD58C-201ENST00000365223 64 ntBASIC-5.42□□□□□ -3.28
LINC00643Q86TS7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-5.42□□□□□ -3.28
LINC00643Q86TS7 Y_RNA.632-201ENST00000459189 102 ntBASIC-5.42□□□□□ -3.28
LINC00643Q86TS7 MIR7110-201ENST00000612638 86 ntBASIC-5.42□□□□□ -3.28
LINC00643Q86TS7 RNU6-755P-201ENST00000364400 103 ntBASIC-5.43□□□□□ -3.28
LINC00643Q86TS7 Y_RNA.626-201ENST00000411288 95 ntBASIC-5.43□□□□□ -3.28
LINC00643Q86TS7 RNU6-737P-201ENST00000365370 107 ntBASIC-5.44□□□□□ -3.28
LINC00643Q86TS7 Y_RNA.604-201ENST00000410574 102 ntBASIC-5.44□□□□□ -3.28
LINC00643Q86TS7 MTND2P23-201ENST00000422990 651 ntBASIC-5.44□□□□□ -3.28
LINC00643Q86TS7 SNORD113.1-201ENST00000363280 73 ntBASIC-5.45□□□□□ -3.28
LINC00643Q86TS7 RNU6-810P-201ENST00000364001 107 ntBASIC-5.45□□□□□ -3.28
LINC00643Q86TS7 RNU6-918P-201ENST00000391219 106 ntBASIC-5.45□□□□□ -3.28
LINC00643Q86TS7 AC074348.1-201ENST00000426503 132 ntBASIC-5.45□□□□□ -3.28
LINC00643Q86TS7 SNORD116-4-201ENST00000384733 96 ntBASIC-5.46□□□□□ -3.28
LINC00643Q86TS7 SCARNA23-201ENST00000516060 130 ntBASIC-5.46□□□□□ -3.28
LINC00643Q86TS7 RNU6-1061P-201ENST00000516530 99 ntBASIC-5.46□□□□□ -3.28
LINC00643Q86TS7 MIR8053-201ENST00000613344 75 ntBASIC-5.46□□□□□ -3.28
LINC00643Q86TS7 Y_RNA.197-201ENST00000364004 102 ntBASIC-5.47□□□□□ -3.29
LINC00643Q86TS7 RNU6-624P-201ENST00000363411 107 ntBASIC-5.48□□□□□ -3.29
LINC00643Q86TS7 RNU6-1169P-201ENST00000363537 103 ntBASIC-5.48□□□□□ -3.29
LINC00643Q86TS7 RNU6-277P-201ENST00000516272 106 ntBASIC-5.49□□□□□ -3.29
LINC00643Q86TS7 AP001340.1-201ENST00000624405 217 ntBASIC-5.5□□□□□ -3.29
LINC00643Q86TS7 MIR1277-201ENST00000408536 78 ntBASIC-5.51□□□□□ -3.29
LINC00643Q86TS7 SNORD19B-201ENST00000459623 84 ntBASIC-5.51□□□□□ -3.29
LINC00643Q86TS7 AC069439.1-201ENST00000494739 167 ntBASIC-5.51□□□□□ -3.29
LINC00643Q86TS7 RNU6-402P-201ENST00000410678 103 ntBASIC-5.52□□□□□ -3.29
LINC00643Q86TS7 RNU6-988P-201ENST00000519081 107 ntBASIC-5.52□□□□□ -3.29
LINC00643Q86TS7 RNU6-822P-201ENST00000362707 106 ntBASIC-5.53□□□□□ -3.29
LINC00643Q86TS7 RNU6-1219P-201ENST00000516143 112 ntBASIC-5.53□□□□□ -3.29
LINC00643Q86TS7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-5.53□□□□□ -3.29
LINC00643Q86TS7 Y_RNA.58-201ENST00000362807 102 ntBASIC-5.55□□□□□ -3.3
LINC00643Q86TS7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-5.55□□□□□ -3.3
LINC00643Q86TS7 RNU6-557P-201ENST00000516842 110 ntBASIC-5.56□□□□□ -3.3
LINC00643Q86TS7 MIR1302-1-201ENST00000637932 143 ntBASIC-5.56□□□□□ -3.3
LINC00643Q86TS7 RNU4-40P-201ENST00000364351 143 ntBASIC-5.57□□□□□ -3.3
LINC00643Q86TS7 RNU6-574P-201ENST00000384265 107 ntBASIC-5.57□□□□□ -3.3
LINC00643Q86TS7 Y_RNA.516-201ENST00000384541 124 ntBASIC-5.57□□□□□ -3.3
LINC00643Q86TS7 AL451105.1-201ENST00000450005 189 ntBASIC-5.57□□□□□ -3.3
LINC00643Q86TS7 AC113195.1-201ENST00000579952 141 ntBASIC-5.57□□□□□ -3.3
LINC00643Q86TS7 U4.5-201ENST00000617137 123 ntBASIC-5.57□□□□□ -3.3
LINC00643Q86TS7 SNORD116.2-201ENST00000391251 93 ntBASIC-5.58□□□□□ -3.3
LINC00643Q86TS7 U7.2-201ENST00000607576 63 ntBASIC-5.58□□□□□ -3.3
LINC00643Q86TS7 SNORA63.4-201ENST00000362763 126 ntBASIC-5.59□□□□□ -3.3
LINC00643Q86TS7 Y_RNA.160-201ENST00000363677 92 ntBASIC-5.59□□□□□ -3.3
LINC00643Q86TS7 SNORD45A-201ENST00000384512 84 ntBASIC-5.59□□□□□ -3.3
LINC00643Q86TS7 RNU6-876P-201ENST00000391295 104 ntBASIC-5.59□□□□□ -3.3
LINC00643Q86TS7 RNU6-231P-201ENST00000517122 103 ntBASIC-5.59□□□□□ -3.3
LINC00643Q86TS7 RNU6-686P-201ENST00000364839 107 ntBASIC-5.6□□□□□ -3.31
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms