Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC099799.1-201ENST00000439809 192 ntBASIC-2.61□□□□□ -2.83
APOBP04114 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.61□□□□□ -2.83
APOBP04114 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.61□□□□□ -2.83
APOBP04114 U2.1-201ENST00000618978 145 ntBASIC-2.61□□□□□ -2.83
APOBP04114 RNU7-169P-201ENST00000459456 61 ntBASIC-2.62□□□□□ -2.83
APOBP04114 RNU6-182P-201ENST00000516970 105 ntBASIC-2.62□□□□□ -2.83
APOBP04114 RNU6-419P-201ENST00000517030 63 ntBASIC-2.62□□□□□ -2.83
APOBP04114 SNORD45.1-201ENST00000363181 77 ntBASIC-2.62□□□□□ -2.83
APOBP04114 SNORD116-10-201ENST00000363791 102 ntBASIC-2.62□□□□□ -2.83
APOBP04114 RPS29P30-201ENST00000600975 111 ntBASIC-2.62□□□□□ -2.83
APOBP04114 MIR548F5-201ENST00000408421 86 ntBASIC-2.63□□□□□ -2.83
APOBP04114 AP003461.1-201ENST00000528866 78 ntBASIC-2.63□□□□□ -2.83
APOBP04114 RNU6-1257P-201ENST00000384625 110 ntBASIC-2.63□□□□□ -2.83
APOBP04114 RNU6-381P-201ENST00000391259 108 ntBASIC-2.63□□□□□ -2.83
APOBP04114 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.63□□□□□ -2.83
APOBP04114 SCARNA23-201ENST00000516060 130 ntBASIC-2.63□□□□□ -2.83
APOBP04114 RNU6-937P-201ENST00000384325 106 ntBASIC-2.63□□□□□ -2.83
APOBP04114 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.63□□□□□ -2.83
APOBP04114 SEPT14P3-201ENST00000439401 183 ntBASIC-2.63□□□□□ -2.83
APOBP04114 AL732372.2-207ENST00000445840 183 ntBASIC-2.63□□□□□ -2.83
APOBP04114 SEPT14P2-201ENST00000453405 183 ntBASIC-2.63□□□□□ -2.83
APOBP04114 FO082796.1-201ENST00000523795 183 ntBASIC-2.63□□□□□ -2.83
APOBP04114 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.63□□□□□ -2.83
APOBP04114 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.63□□□□□ -2.83
APOBP04114 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.64□□□□□ -2.83
APOBP04114 RNU6-979P-201ENST00000383896 107 ntBASIC-2.64□□□□□ -2.83
APOBP04114 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.64□□□□□ -2.83
APOBP04114 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.64□□□□□ -2.83
APOBP04114 RNU6-290P-201ENST00000365212 101 ntBASIC-2.64□□□□□ -2.83
APOBP04114 RNU6-578P-201ENST00000390980 103 ntBASIC-2.64□□□□□ -2.83
APOBP04114 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.64□□□□□ -2.83
APOBP04114 SNORD116.2-201ENST00000391251 93 ntBASIC-2.64□□□□□ -2.83
APOBP04114 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.65□□□□□ -2.83
APOBP04114 MIR4777-201ENST00000583710 86 ntBASIC-2.65□□□□□ -2.83
APOBP04114 AC024614.3-201ENST00000637860 256 ntBASIC-2.65□□□□□ -2.83
APOBP04114 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.66□□□□□ -2.83
APOBP04114 RNU6-906P-201ENST00000384700 70 ntBASIC-2.66□□□□□ -2.83
APOBP04114 RNU7-119P-201ENST00000459279 63 ntBASIC-2.66□□□□□ -2.83
APOBP04114 SNORD115.2-201ENST00000391126 59 ntBASIC-2.66□□□□□ -2.84
APOBP04114 RNU6-1046P-201ENST00000516538 107 ntBASIC-2.66□□□□□ -2.84
APOBP04114 RNU6-1314P-201ENST00000517139 104 ntBASIC-2.66□□□□□ -2.84
APOBP04114 AC103810.7-201ENST00000607821 91 ntBASIC-2.66□□□□□ -2.84
APOBP04114 SNORD115-46-201ENST00000390982 71 ntBASIC-2.66□□□□□ -2.84
APOBP04114 SNORA63.7-201ENST00000365579 123 ntBASIC-2.66□□□□□ -2.84
APOBP04114 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.67□□□□□ -2.84
APOBP04114 RNU6-303P-201ENST00000517091 106 ntBASIC-2.67□□□□□ -2.84
APOBP04114 RNU6-627P-201ENST00000364032 102 ntBASIC-2.67□□□□□ -2.84
APOBP04114 RNU4-11P-201ENST00000365287 132 ntBASIC-2.67□□□□□ -2.84
APOBP04114 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.67□□□□□ -2.84
APOBP04114 SNORD60.1-201ENST00000362451 73 ntBASIC-2.68□□□□□ -2.84
APOBP04114 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.68□□□□□ -2.84
APOBP04114 MIR4694-201ENST00000578534 80 ntBASIC-2.68□□□□□ -2.84
APOBP04114 SNORA75.5-201ENST00000391291 81 ntBASIC-2.68□□□□□ -2.84
APOBP04114 RNU6-92P-201ENST00000605893 104 ntBASIC-2.68□□□□□ -2.84
APOBP04114 MIR4679-2-201ENST00000578358 77 ntBASIC-2.68□□□□□ -2.84
APOBP04114 RNU6-686P-201ENST00000364839 107 ntBASIC-2.69□□□□□ -2.84
APOBP04114 SNORD81.2-201ENST00000365153 76 ntBASIC-2.69□□□□□ -2.84
APOBP04114 Y_RNA.590-201ENST00000410140 107 ntBASIC-2.69□□□□□ -2.84
APOBP04114 MTND3P10-201ENST00000450967 341 ntBASIC-2.69□□□□□ -2.84
APOBP04114 RNY3P10-201ENST00000384764 102 ntBASIC-2.69□□□□□ -2.84
APOBP04114 AL445567.1-201ENST00000439121 144 ntBASIC-2.69□□□□□ -2.84
APOBP04114 AC130289.1-201ENST00000577321 73 ntBASIC-2.7□□□□□ -2.84
APOBP04114 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.7□□□□□ -2.84
APOBP04114 RNU6-231P-201ENST00000517122 103 ntBASIC-2.7□□□□□ -2.84
APOBP04114 RNU6-537P-201ENST00000517277 103 ntBASIC-2.7□□□□□ -2.84
APOBP04114 MIR5009-201ENST00000578736 100 ntBASIC-2.71□□□□□ -2.84
APOBP04114 MIR3121-201ENST00000579680 77 ntBASIC-2.71□□□□□ -2.84
APOBP04114 MIR4272-201ENST00000635924 64 ntBASIC-2.71□□□□□ -2.84
APOBP04114 MIR6863-201ENST00000636112 90 ntBASIC-2.71□□□□□ -2.84
APOBP04114 RNU6-508P-201ENST00000363231 103 ntBASIC-2.71□□□□□ -2.84
APOBP04114 MIR548D2-201ENST00000384955 97 ntBASIC-2.71□□□□□ -2.84
APOBP04114 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.71□□□□□ -2.84
APOBP04114 SNORD116-2-201ENST00000384274 95 ntBASIC-2.71□□□□□ -2.84
APOBP04114 U6.104-201ENST00000637979 90 ntBASIC-2.71□□□□□ -2.84
APOBP04114 RNU6-1085P-201ENST00000363576 107 ntBASIC-2.72□□□□□ -2.84
APOBP04114 MTCO2P19-201ENST00000427513 598 ntBASIC-2.72□□□□□ -2.84
APOBP04114 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.72□□□□□ -2.84
APOBP04114 AC096644.2-201ENST00000429278 159 ntBASIC-2.72□□□□□ -2.84
APOBP04114 RNU4-40P-201ENST00000364351 143 ntBASIC-2.73□□□□□ -2.85
APOBP04114 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.73□□□□□ -2.85
APOBP04114 AC080013.6-201ENST00000606185 215 ntBASIC-2.73□□□□□ -2.85
APOBP04114 MTND2P14-201ENST00000482139 351 ntBASIC-2.73□□□□□ -2.85
APOBP04114 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.73□□□□□ -2.85
APOBP04114 AC138305.3-201ENST00000624988 240 ntBASIC-2.73□□□□□ -2.85
APOBP04114 RNU6-624P-201ENST00000363411 107 ntBASIC-2.74□□□□□ -2.85
APOBP04114 RNU6-604P-201ENST00000390917 100 ntBASIC-2.74□□□□□ -2.85
APOBP04114 RNU6-557P-201ENST00000516842 110 ntBASIC-2.74□□□□□ -2.85
APOBP04114 RNU7-153P-201ENST00000516455 62 ntBASIC-2.74□□□□□ -2.85
APOBP04114 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.75□□□□□ -2.85
APOBP04114 RNU6-768P-201ENST00000384683 107 ntBASIC-2.75□□□□□ -2.85
APOBP04114 RNY3P2-201ENST00000362918 102 ntBASIC-2.75□□□□□ -2.85
APOBP04114 RNU6-379P-201ENST00000363813 104 ntBASIC-2.76□□□□□ -2.85
APOBP04114 AC090425.1-201ENST00000610007 140 ntBASIC-2.76□□□□□ -2.85
APOBP04114 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.76□□□□□ -2.85
APOBP04114 SNORA40B-201ENST00000385573 128 ntBASIC-2.76□□□□□ -2.85
APOBP04114 AL603755.1-201ENST00000619504 163 ntBASIC-2.76□□□□□ -2.85
APOBP04114 MIR6844-201ENST00000637122 62 ntBASIC-2.76□□□□□ -2.85
APOBP04114 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.77□□□□□ -2.85
APOBP04114 RNU6-639P-201ENST00000384074 107 ntBASIC-2.77□□□□□ -2.85
APOBP04114 AC015540.1-201ENST00000615828 501 ntBASIC-2.77□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 252.2 ms