Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
PRPF40BQ6NWY9 SNORD118-201ENST00000363593 134 ntBASIC0.88□□□□□ -2.27
PRPF40BQ6NWY9 SNORD30.1-201ENST00000391309 70 ntBASIC0.88□□□□□ -2.27
PRPF40BQ6NWY9 RNU6-881P-201ENST00000516813 102 ntBASIC0.88□□□□□ -2.27
PRPF40BQ6NWY9 RNU6-260P-201ENST00000384092 107 ntBASIC0.87□□□□□ -2.27
PRPF40BQ6NWY9 RNU6-990P-201ENST00000364385 104 ntBASIC0.86□□□□□ -2.27
PRPF40BQ6NWY9 SNORD115-31-201ENST00000365318 82 ntBASIC0.86□□□□□ -2.27
PRPF40BQ6NWY9 RNU6-649P-201ENST00000384463 107 ntBASIC0.86□□□□□ -2.27
PRPF40BQ6NWY9 MIR518A1-201ENST00000385068 85 ntBASIC0.86□□□□□ -2.27
PRPF40BQ6NWY9 U7.6-201ENST00000610841 64 ntBASIC0.86□□□□□ -2.27
PRPF40BQ6NWY9 MIR6086-201ENST00000638065 55 ntBASIC0.86□□□□□ -2.27
PRPF40BQ6NWY9 SNORD115-22-201ENST00000364456 82 ntBASIC0.85□□□□□ -2.27
PRPF40BQ6NWY9 SNORA2A-201ENST00000383885 135 ntBASIC0.85□□□□□ -2.27
PRPF40BQ6NWY9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.85□□□□□ -2.27
PRPF40BQ6NWY9 RNA5SP147-201ENST00000516493 109 ntBASIC0.85□□□□□ -2.27
PRPF40BQ6NWY9 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
PRPF40BQ6NWY9 MIR5706-201ENST00000579841 80 ntBASIC0.85□□□□□ -2.27
PRPF40BQ6NWY9 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
PRPF40BQ6NWY9 SNORA2.1-201ENST00000363089 137 ntBASIC0.84□□□□□ -2.27
PRPF40BQ6NWY9 RNU6-663P-201ENST00000391105 106 ntBASIC0.84□□□□□ -2.27
PRPF40BQ6NWY9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.84□□□□□ -2.27
PRPF40BQ6NWY9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.83□□□□□ -2.28
PRPF40BQ6NWY9 MIR548AE1-201ENST00000583292 70 ntBASIC0.83□□□□□ -2.28
PRPF40BQ6NWY9 MIR2909-201ENST00000617113 69 ntBASIC0.83□□□□□ -2.28
PRPF40BQ6NWY9 uc_338.10-201ENST00000621872 182 ntBASIC0.83□□□□□ -2.28
PRPF40BQ6NWY9 MIR652-201ENST00000385278 98 ntBASIC0.82□□□□□ -2.28
PRPF40BQ6NWY9 RNU4-54P-201ENST00000516428 129 ntBASIC0.82□□□□□ -2.28
PRPF40BQ6NWY9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PRPF40BQ6NWY9 SNORD113.1-201ENST00000363280 73 ntBASIC0.81□□□□□ -2.28
PRPF40BQ6NWY9 RNU6-945P-201ENST00000383947 107 ntBASIC0.81□□□□□ -2.28
PRPF40BQ6NWY9 RNU6-540P-201ENST00000384622 101 ntBASIC0.81□□□□□ -2.28
PRPF40BQ6NWY9 AC098934.3-201ENST00000430450 190 ntBASIC0.81□□□□□ -2.28
PRPF40BQ6NWY9 RNU6-539P-201ENST00000516665 103 ntBASIC0.81□□□□□ -2.28
PRPF40BQ6NWY9 AC243829.3-201ENST00000622177 108 ntBASIC0.81□□□□□ -2.28
PRPF40BQ6NWY9 RNA5SP499-201ENST00000363982 119 ntBASIC0.8□□□□□ -2.28
PRPF40BQ6NWY9 MTND4LP1-201ENST00000446263 157 ntBASIC0.8□□□□□ -2.28
PRPF40BQ6NWY9 AC139453.2-201ENST00000487255 133 ntBASIC0.8□□□□□ -2.28
PRPF40BQ6NWY9 AC021146.9-201ENST00000512503 156 ntBASIC0.8□□□□□ -2.28
PRPF40BQ6NWY9 HMGN2P22-201ENST00000427588 175 ntBASIC0.79□□□□□ -2.28
PRPF40BQ6NWY9 RNU1-29P-201ENST00000606574 126 ntBASIC0.79□□□□□ -2.28
PRPF40BQ6NWY9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
PRPF40BQ6NWY9 RNU6-1216P-201ENST00000362590 107 ntBASIC0.78□□□□□ -2.28
PRPF40BQ6NWY9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.77□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-982P-201ENST00000516216 102 ntBASIC0.77□□□□□ -2.29
PRPF40BQ6NWY9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.76□□□□□ -2.29
PRPF40BQ6NWY9 MIR760-201ENST00000390220 80 ntBASIC0.76□□□□□ -2.29
PRPF40BQ6NWY9 RNU7-129P-201ENST00000516128 62 ntBASIC0.76□□□□□ -2.29
PRPF40BQ6NWY9 U6.111-201ENST00000636093 83 ntBASIC0.76□□□□□ -2.29
PRPF40BQ6NWY9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-645P-201ENST00000364649 106 ntBASIC0.75□□□□□ -2.29
PRPF40BQ6NWY9 SNORA63.6-201ENST00000364921 119 ntBASIC0.75□□□□□ -2.29
PRPF40BQ6NWY9 snoU13.13-201ENST00000458842 104 ntBASIC0.75□□□□□ -2.29
PRPF40BQ6NWY9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.74□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-668P-201ENST00000364180 107 ntBASIC0.74□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-590P-201ENST00000365039 107 ntBASIC0.74□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.74□□□□□ -2.29
PRPF40BQ6NWY9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
PRPF40BQ6NWY9 MIR516B1-201ENST00000385211 90 ntBASIC0.73□□□□□ -2.29
PRPF40BQ6NWY9 MIR6755-201ENST00000619993 66 ntBASIC0.73□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-630P-201ENST00000391258 106 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-848P-201ENST00000515948 107 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-863P-201ENST00000515989 104 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-617P-201ENST00000516147 107 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-473P-201ENST00000516164 107 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 SNORA40.17-201ENST00000517256 115 ntBASIC0.72□□□□□ -2.29
PRPF40BQ6NWY9 MIR20A-201ENST00000362279 71 ntBASIC0.71□□□□□ -2.3
PRPF40BQ6NWY9 SNORD114-29-201ENST00000364819 70 ntBASIC0.71□□□□□ -2.3
PRPF40BQ6NWY9 Y_RNA.443-201ENST00000384135 111 ntBASIC0.71□□□□□ -2.3
PRPF40BQ6NWY9 MIR548E-201ENST00000408287 88 ntBASIC0.7□□□□□ -2.3
PRPF40BQ6NWY9 RNA5SP285-201ENST00000516619 119 ntBASIC0.7□□□□□ -2.3
PRPF40BQ6NWY9 MIR6739-201ENST00000622461 75 ntBASIC0.7□□□□□ -2.3
PRPF40BQ6NWY9 RNA5SP128-201ENST00000365305 116 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 MIR582-201ENST00000365731 98 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 RNU6-800P-201ENST00000384473 103 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 MIR501-201ENST00000390204 84 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 RNU6-788P-201ENST00000390967 104 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 AC244090.1-201ENST00000441884 93 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.69□□□□□ -2.3
PRPF40BQ6NWY9 SNORA25.4-201ENST00000363666 124 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 SNORA15B-2-201ENST00000384058 135 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 SNORA15B-1-201ENST00000384334 135 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 RNU7-188P-201ENST00000517063 64 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 MIR4677-201ENST00000584153 80 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 AC084368.1-201ENST00000620935 65 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 MIR5087-201ENST00000635826 76 ntBASIC0.68□□□□□ -2.3
PRPF40BQ6NWY9 SNORD116-24-201ENST00000384549 92 ntBASIC0.67□□□□□ -2.3
PRPF40BQ6NWY9 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
PRPF40BQ6NWY9 MIR548C-201ENST00000384815 97 ntBASIC0.66□□□□□ -2.3
PRPF40BQ6NWY9 MIR521-2-201ENST00000384818 87 ntBASIC0.66□□□□□ -2.3
PRPF40BQ6NWY9 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
PRPF40BQ6NWY9 MIR4514-201ENST00000581410 57 ntBASIC0.66□□□□□ -2.3
PRPF40BQ6NWY9 SNORD44.1-201ENST00000363202 61 ntBASIC0.65□□□□□ -2.31
PRPF40BQ6NWY9 AC125388.1-201ENST00000459631 156 ntBASIC0.65□□□□□ -2.31
PRPF40BQ6NWY9 RNU6-656P-201ENST00000516785 107 ntBASIC0.65□□□□□ -2.31
PRPF40BQ6NWY9 Y_RNA.340-201ENST00000365330 92 ntBASIC0.64□□□□□ -2.31
PRPF40BQ6NWY9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.64□□□□□ -2.31
PRPF40BQ6NWY9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.64□□□□□ -2.31
PRPF40BQ6NWY9 SNORD2-201ENST00000459163 69 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms