Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MIR5591-201ENST00000578248 65 ntBASIC-1.13□□□□□ -2.59
SEMA3DO95025 MIR382-201ENST00000637119 76 ntBASIC-1.13□□□□□ -2.59
SEMA3DO95025 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 MIR124-2-201ENST00000385081 109 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 RNA5SP292-201ENST00000390974 118 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 SNORD75.2-201ENST00000408784 58 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 MIR548Z-201ENST00000584743 97 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 U6.96-201ENST00000636425 70 ntBASIC-1.14□□□□□ -2.59
SEMA3DO95025 RNU6-519P-201ENST00000410590 108 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.15□□□□□ -2.59
SEMA3DO95025 RNU7-24P-201ENST00000458867 62 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 RNU7-134P-201ENST00000458997 64 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 RNU7-107P-201ENST00000459121 61 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 MIR5009-201ENST00000578736 100 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 AC090617.8-201ENST00000623339 167 ntBASIC-1.15□□□□□ -2.59
SEMA3DO95025 MT-TG-201ENST00000387429 68 ntBASIC-1.16□□□□□ -2.6
SEMA3DO95025 YWHAEP3-201ENST00000582767 121 ntBASIC-1.16□□□□□ -2.6
SEMA3DO95025 AL353621.2-201ENST00000605340 133 ntBASIC-1.16□□□□□ -2.6
SEMA3DO95025 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.16□□□□□ -2.6
SEMA3DO95025 RNU6-208P-201ENST00000362431 107 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 MIR548A1-201ENST00000385041 97 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 RNU6-182P-201ENST00000516970 105 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 MIR4777-201ENST00000583710 86 ntBASIC-1.17□□□□□ -2.6
SEMA3DO95025 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.18□□□□□ -2.6
SEMA3DO95025 SNORA40-201ENST00000388090 126 ntBASIC-1.18□□□□□ -2.6
SEMA3DO95025 RNU6-732P-201ENST00000516033 103 ntBASIC-1.18□□□□□ -2.6
SEMA3DO95025 RNU6-795P-201ENST00000516323 103 ntBASIC-1.18□□□□□ -2.6
SEMA3DO95025 SNORA18.5-201ENST00000516616 101 ntBASIC-1.18□□□□□ -2.6
SEMA3DO95025 RNU6-382P-201ENST00000365181 106 ntBASIC-1.19□□□□□ -2.6
SEMA3DO95025 SNORA62.4-201ENST00000365504 151 ntBASIC-1.19□□□□□ -2.6
SEMA3DO95025 RNU6-886P-201ENST00000384319 105 ntBASIC-1.19□□□□□ -2.6
SEMA3DO95025 MIR496-201ENST00000385226 102 ntBASIC-1.19□□□□□ -2.6
SEMA3DO95025 RNU6-257P-201ENST00000410238 98 ntBASIC-1.19□□□□□ -2.6
SEMA3DO95025 RNU6-62P-201ENST00000516526 102 ntBASIC-1.19□□□□□ -2.6
SEMA3DO95025 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.2□□□□□ -2.6
SEMA3DO95025 RNA5SP147-201ENST00000516493 109 ntBASIC-1.2□□□□□ -2.6
SEMA3DO95025 AC012531.4-201ENST00000616509 177 ntBASIC-1.2□□□□□ -2.6
SEMA3DO95025 SNORD114-17-201ENST00000364699 75 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 RNU6-260P-201ENST00000384092 107 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 RNU6-880P-201ENST00000384526 107 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 MTATP6P29-201ENST00000415057 132 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 snoU13.17-201ENST00000458802 104 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 AL353803.5-201ENST00000599815 141 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 AC006254.2-201ENST00000603259 279 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 AL445584.3-201ENST00000617173 78 ntBASIC-1.21□□□□□ -2.6
SEMA3DO95025 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 MIR203A-201ENST00000384836 110 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 MIR147A-201ENST00000385079 72 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 MIR548I1-201ENST00000408810 149 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 RNU6-983P-201ENST00000516004 103 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 SNORD33.1-201ENST00000516213 88 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 MIR4464-201ENST00000580818 92 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 MIR4773-1-201ENST00000637203 78 ntBASIC-1.22□□□□□ -2.6
SEMA3DO95025 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
SEMA3DO95025 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 MIR889-201ENST00000401280 79 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 RNU7-200P-201ENST00000516105 62 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 RNU6-971P-201ENST00000516920 106 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 MIR4520-1-201ENST00000582609 70 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 MIR3914-2-201ENST00000637339 95 ntBASIC-1.23□□□□□ -2.61
SEMA3DO95025 RNU6-824P-201ENST00000363724 104 ntBASIC-1.24□□□□□ -2.61
SEMA3DO95025 AC138207.3-201ENST00000585289 166 ntBASIC-1.24□□□□□ -2.61
SEMA3DO95025 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 SNORA33.1-201ENST00000364957 130 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 MIR548A3-201ENST00000385297 97 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 MIR6509-201ENST00000614603 85 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 MIR6888-201ENST00000621977 67 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 AC099654.10-201ENST00000640395 161 ntBASIC-1.25□□□□□ -2.61
SEMA3DO95025 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.26□□□□□ -2.61
SEMA3DO95025 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 SNORD58A-201ENST00000383875 65 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 MIR1255B2-201ENST00000408618 67 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 RNU6-346P-201ENST00000516288 111 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 RNU6-118P-201ENST00000516552 102 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.27□□□□□ -2.61
SEMA3DO95025 RNU5F-1-201ENST00000362507 117 ntBASIC-1.28□□□□□ -2.61
SEMA3DO95025 SNORA19.1-201ENST00000410656 129 ntBASIC-1.28□□□□□ -2.61
SEMA3DO95025 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.28□□□□□ -2.61
SEMA3DO95025 MIR3657-201ENST00000584818 117 ntBASIC-1.28□□□□□ -2.61
SEMA3DO95025 SNORA2.1-201ENST00000363089 137 ntBASIC-1.29□□□□□ -2.62
SEMA3DO95025 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.29□□□□□ -2.62
SEMA3DO95025 AL691482.2-201ENST00000457453 84 ntBASIC-1.29□□□□□ -2.62
SEMA3DO95025 RNU6-972P-201ENST00000391208 107 ntBASIC-1.3□□□□□ -2.62
SEMA3DO95025 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.3□□□□□ -2.62
SEMA3DO95025 CYP3A54P-201ENST00000566950 75 ntBASIC-1.3□□□□□ -2.62
SEMA3DO95025 MIR4770-201ENST00000579149 58 ntBASIC-1.3□□□□□ -2.62
SEMA3DO95025 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.3□□□□□ -2.62
SEMA3DO95025 U6.95-201ENST00000636931 70 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms