Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
SOX1O00570 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.08□□□□□ -2.24
SOX1O00570 MIR6739-201ENST00000622461 75 ntBASIC1.08□□□□□ -2.24
SOX1O00570 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
SOX1O00570 Y_RNA.407-201ENST00000383986 113 ntBASIC1.07□□□□□ -2.24
SOX1O00570 SNORD110-201ENST00000408189 75 ntBASIC1.07□□□□□ -2.24
SOX1O00570 AC006210.1-201ENST00000424882 111 ntBASIC1.07□□□□□ -2.24
SOX1O00570 RNA5SP147-201ENST00000516493 109 ntBASIC1.07□□□□□ -2.24
SOX1O00570 SNORA40.17-201ENST00000517256 115 ntBASIC1.07□□□□□ -2.24
SOX1O00570 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SOX1O00570 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
SOX1O00570 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
SOX1O00570 RNU6-1162P-201ENST00000384443 104 ntBASIC1.03□□□□□ -2.24
SOX1O00570 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
SOX1O00570 SCARNA17.3-201ENST00000516381 125 ntBASIC1.03□□□□□ -2.24
SOX1O00570 RNU6-656P-201ENST00000516785 107 ntBASIC1.03□□□□□ -2.24
SOX1O00570 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
SOX1O00570 MIR652-201ENST00000385278 98 ntBASIC1.02□□□□□ -2.25
SOX1O00570 RNU6-542P-201ENST00000516405 103 ntBASIC1.02□□□□□ -2.25
SOX1O00570 Y_RNA.375-201ENST00000365625 101 ntBASIC1.01□□□□□ -2.25
SOX1O00570 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
SOX1O00570 MIR4711-201ENST00000578274 70 ntBASIC1.01□□□□□ -2.25
SOX1O00570 MIR5706-201ENST00000579841 80 ntBASIC1.01□□□□□ -2.25
SOX1O00570 RNA5SP215-201ENST00000363440 122 ntBASIC1□□□□□ -2.25
SOX1O00570 RNA5SP517-201ENST00000364724 117 ntBASIC1□□□□□ -2.25
SOX1O00570 MIR521-2-201ENST00000384818 87 ntBASIC1□□□□□ -2.25
SOX1O00570 MIR140-201ENST00000385282 100 ntBASIC1□□□□□ -2.25
SOX1O00570 MIR4473-201ENST00000583731 91 ntBASIC1□□□□□ -2.25
SOX1O00570 uc_338.10-201ENST00000621872 182 ntBASIC1□□□□□ -2.25
SOX1O00570 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
SOX1O00570 SNORA15B-2-201ENST00000384058 135 ntBASIC0.99□□□□□ -2.25
SOX1O00570 SNORA15B-1-201ENST00000384334 135 ntBASIC0.99□□□□□ -2.25
SOX1O00570 MIR9-2-201ENST00000384838 87 ntBASIC0.99□□□□□ -2.25
SOX1O00570 SNORA70.25-201ENST00000612741 95 ntBASIC0.99□□□□□ -2.25
SOX1O00570 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
SOX1O00570 MIR548AE1-201ENST00000583292 70 ntBASIC0.98□□□□□ -2.25
SOX1O00570 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SOX1O00570 RNY1P8-201ENST00000383970 114 ntBASIC0.97□□□□□ -2.25
SOX1O00570 AC110620.1-201ENST00000416042 228 ntBASIC0.97□□□□□ -2.25
SOX1O00570 snoU13.13-201ENST00000458842 104 ntBASIC0.97□□□□□ -2.25
SOX1O00570 AC021146.9-201ENST00000512503 156 ntBASIC0.97□□□□□ -2.25
SOX1O00570 RNU6-1089P-201ENST00000516473 104 ntBASIC0.97□□□□□ -2.25
SOX1O00570 MIR4752-201ENST00000579672 72 ntBASIC0.97□□□□□ -2.25
SOX1O00570 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.97□□□□□ -2.25
SOX1O00570 AC069271.1-201ENST00000445577 156 ntBASIC0.96□□□□□ -2.26
SOX1O00570 Y_RNA.633-201ENST00000459107 95 ntBASIC0.96□□□□□ -2.26
SOX1O00570 SNORD118-201ENST00000363593 134 ntBASIC0.95□□□□□ -2.26
SOX1O00570 RNU6-110P-201ENST00000384508 104 ntBASIC0.95□□□□□ -2.26
SOX1O00570 SNORA40.8-201ENST00000411034 126 ntBASIC0.95□□□□□ -2.26
SOX1O00570 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
SOX1O00570 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SOX1O00570 SNORA63.6-201ENST00000364921 119 ntBASIC0.94□□□□□ -2.26
SOX1O00570 HMGN2P22-201ENST00000427588 175 ntBASIC0.94□□□□□ -2.26
SOX1O00570 RNA5SP285-201ENST00000516619 119 ntBASIC0.94□□□□□ -2.26
SOX1O00570 RNU1-29P-201ENST00000606574 126 ntBASIC0.94□□□□□ -2.26
SOX1O00570 RNU6-669P-201ENST00000365575 107 ntBASIC0.93□□□□□ -2.26
SOX1O00570 MIR508-201ENST00000384857 115 ntBASIC0.93□□□□□ -2.26
SOX1O00570 SNORA25.18-201ENST00000607153 114 ntBASIC0.93□□□□□ -2.26
SOX1O00570 U7.6-201ENST00000610841 64 ntBASIC0.93□□□□□ -2.26
SOX1O00570 AL157398.1-201ENST00000452981 186 ntBASIC0.92□□□□□ -2.26
SOX1O00570 Y_RNA.125-201ENST00000363371 111 ntBASIC0.91□□□□□ -2.26
SOX1O00570 SNORA2A-201ENST00000383885 135 ntBASIC0.91□□□□□ -2.26
SOX1O00570 RNA5SP299-201ENST00000391203 116 ntBASIC0.91□□□□□ -2.26
SOX1O00570 MIR548E-201ENST00000408287 88 ntBASIC0.91□□□□□ -2.26
SOX1O00570 SNORD71-201ENST00000411292 86 ntBASIC0.91□□□□□ -2.26
SOX1O00570 MIR20A-201ENST00000362279 71 ntBASIC0.9□□□□□ -2.27
SOX1O00570 RNU6-302P-201ENST00000365249 107 ntBASIC0.9□□□□□ -2.27
SOX1O00570 MIR582-201ENST00000365731 98 ntBASIC0.9□□□□□ -2.27
SOX1O00570 RNU6-499P-201ENST00000365615 107 ntBASIC0.89□□□□□ -2.27
SOX1O00570 MIR518A1-201ENST00000385068 85 ntBASIC0.89□□□□□ -2.27
SOX1O00570 RNU6-848P-201ENST00000515948 107 ntBASIC0.89□□□□□ -2.27
SOX1O00570 RNU6-617P-201ENST00000516147 107 ntBASIC0.89□□□□□ -2.27
SOX1O00570 RNU6-473P-201ENST00000516164 107 ntBASIC0.89□□□□□ -2.27
SOX1O00570 RNU6-1049P-201ENST00000516414 107 ntBASIC0.89□□□□□ -2.27
SOX1O00570 RNU6-229P-201ENST00000516614 102 ntBASIC0.89□□□□□ -2.27
SOX1O00570 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
SOX1O00570 SNORA25.5-201ENST00000363782 126 ntBASIC0.88□□□□□ -2.27
SOX1O00570 SNORA33.1-201ENST00000364957 130 ntBASIC0.88□□□□□ -2.27
SOX1O00570 MIR548C-201ENST00000384815 97 ntBASIC0.88□□□□□ -2.27
SOX1O00570 AC244090.1-201ENST00000441884 93 ntBASIC0.88□□□□□ -2.27
SOX1O00570 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
SOX1O00570 SCARNA21.1-201ENST00000515996 128 ntBASIC0.87□□□□□ -2.27
SOX1O00570 AC243829.3-201ENST00000622177 108 ntBASIC0.87□□□□□ -2.27
SOX1O00570 Y_RNA.423-201ENST00000384057 113 ntBASIC0.86□□□□□ -2.27
SOX1O00570 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
SOX1O00570 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
SOX1O00570 MIR4636-201ENST00000582271 80 ntBASIC0.86□□□□□ -2.27
SOX1O00570 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.85□□□□□ -2.27
SOX1O00570 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SOX1O00570 SNORD2-201ENST00000459163 69 ntBASIC0.85□□□□□ -2.27
SOX1O00570 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
SOX1O00570 U2.7-201ENST00000619197 100 ntBASIC0.85□□□□□ -2.27
SOX1O00570 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
SOX1O00570 SNORD114-29-201ENST00000364819 70 ntBASIC0.84□□□□□ -2.27
SOX1O00570 MIR517B-201ENST00000385102 67 ntBASIC0.84□□□□□ -2.27
SOX1O00570 MIR548V-201ENST00000584165 80 ntBASIC0.84□□□□□ -2.27
SOX1O00570 U6.96-201ENST00000636425 70 ntBASIC0.84□□□□□ -2.27
SOX1O00570 RNU6-940P-201ENST00000363433 104 ntBASIC0.83□□□□□ -2.28
SOX1O00570 MIR516B1-201ENST00000385211 90 ntBASIC0.83□□□□□ -2.28
SOX1O00570 RNU4-54P-201ENST00000516428 129 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 316.1 ms