Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RNU6-990P-201ENST00000364385 104 ntBASIC0.83□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU6-260P-201ENST00000384092 107 ntBASIC0.83□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU6-540P-201ENST00000384622 101 ntBASIC0.83□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU6-604P-201ENST00000390917 100 ntBASIC0.83□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR4473-201ENST00000583731 91 ntBASIC0.83□□□□□ -2.28
HLA-DQA1Q5Y7H0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.83□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR3657-201ENST00000584818 117 ntBASIC0.82□□□□□ -2.28
HLA-DQA1Q5Y7H0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORD118-201ENST00000363593 134 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORA40.8-201ENST00000411034 126 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU4-54P-201ENST00000516428 129 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR548AE1-201ENST00000583292 70 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU1-29P-201ENST00000606574 126 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR8053-201ENST00000613344 75 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR6504-201ENST00000613520 61 ntBASIC0.81□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR1276-201ENST00000408707 83 ntBASIC0.8□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR96-201ENST00000362288 78 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR652-201ENST00000385278 98 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORD30.1-201ENST00000391309 70 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNA5SP147-201ENST00000516493 109 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU6-881P-201ENST00000516813 102 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORA40.17-201ENST00000517256 115 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.79□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORD113.1-201ENST00000363280 73 ntBASIC0.78□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
HLA-DQA1Q5Y7H0 SNORD114-4-201ENST00000363962 75 ntBASIC0.78□□□□□ -2.28
HLA-DQA1Q5Y7H0 Y_RNA.407-201ENST00000383986 113 ntBASIC0.78□□□□□ -2.28
HLA-DQA1Q5Y7H0 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
HLA-DQA1Q5Y7H0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.77□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-895P-201ENST00000384125 103 ntBASIC0.77□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-649P-201ENST00000384463 107 ntBASIC0.77□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR518A1-201ENST00000385068 85 ntBASIC0.77□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-982P-201ENST00000516216 102 ntBASIC0.77□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU1-93P-201ENST00000364704 169 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR499A-201ENST00000384903 122 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-663P-201ENST00000391105 106 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 HMGN2P22-201ENST00000427588 175 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR4452-201ENST00000583004 71 ntBASIC0.76□□□□□ -2.29
HLA-DQA1Q5Y7H0 SNORD71-201ENST00000411292 86 ntBASIC0.75□□□□□ -2.29
HLA-DQA1Q5Y7H0 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.75□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-539P-201ENST00000516665 103 ntBASIC0.75□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
HLA-DQA1Q5Y7H0 SNORA2.1-201ENST00000363089 137 ntBASIC0.74□□□□□ -2.29
HLA-DQA1Q5Y7H0 snoU13.13-201ENST00000458842 104 ntBASIC0.74□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
HLA-DQA1Q5Y7H0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.74□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR520E-201ENST00000384867 87 ntBASIC0.73□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR7-2-201ENST00000384970 110 ntBASIC0.73□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
HLA-DQA1Q5Y7H0 uc_338.10-201ENST00000621872 182 ntBASIC0.73□□□□□ -2.29
HLA-DQA1Q5Y7H0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HLA-DQA1Q5Y7H0 RNU6-1216P-201ENST00000362590 107 ntBASIC0.72□□□□□ -2.29
HLA-DQA1Q5Y7H0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.72□□□□□ -2.29
HLA-DQA1Q5Y7H0 SNORA2A-201ENST00000383885 135 ntBASIC0.72□□□□□ -2.29
HLA-DQA1Q5Y7H0 AC098934.3-201ENST00000430450 190 ntBASIC0.72□□□□□ -2.29
HLA-DQA1Q5Y7H0 MIR6755-201ENST00000619993 66 ntBASIC0.72□□□□□ -2.29
HLA-DQA1Q5Y7H0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR373-201ENST00000362273 69 ntBASIC0.71□□□□□ -2.3
HLA-DQA1Q5Y7H0 SNORD116-24-201ENST00000384549 92 ntBASIC0.71□□□□□ -2.3
HLA-DQA1Q5Y7H0 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
HLA-DQA1Q5Y7H0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.7□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR582-201ENST00000365731 98 ntBASIC0.7□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
HLA-DQA1Q5Y7H0 U6.111-201ENST00000636093 83 ntBASIC0.7□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-645P-201ENST00000364649 106 ntBASIC0.69□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-788P-201ENST00000390967 104 ntBASIC0.68□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-630P-201ENST00000391258 106 ntBASIC0.68□□□□□ -2.3
HLA-DQA1Q5Y7H0 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-800P-201ENST00000384473 103 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR548E-201ENST00000408287 88 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR1287-201ENST00000408492 90 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 AC021146.9-201ENST00000512503 156 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR6739-201ENST00000622461 75 ntBASIC0.67□□□□□ -2.3
HLA-DQA1Q5Y7H0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.66□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-590P-201ENST00000365039 107 ntBASIC0.66□□□□□ -2.3
HLA-DQA1Q5Y7H0 RNU6-656P-201ENST00000516785 107 ntBASIC0.66□□□□□ -2.3
HLA-DQA1Q5Y7H0 MIR6788-201ENST00000618842 66 ntBASIC0.66□□□□□ -2.3
HLA-DQA1Q5Y7H0 SNORD44.1-201ENST00000363202 61 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 Y_RNA.386-201ENST00000383913 105 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR516B1-201ENST00000385211 90 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 MIR760-201ENST00000390220 80 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 MTND4LP1-201ENST00000446263 157 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 AC005520.4-201ENST00000604337 90 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 U7.6-201ENST00000610841 64 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 AL109933.3-201ENST00000619095 188 ntBASIC0.65□□□□□ -2.31
HLA-DQA1Q5Y7H0 RNU6-668P-201ENST00000364180 107 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms