Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 MIR608-201ENST00000384820 100 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 MT-TY-201ENST00000387409 66 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 RNA5SP484-201ENST00000458857 111 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 RNU6-351P-201ENST00000516097 100 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 Y_RNA.681-201ENST00000516445 113 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 MIR4460-201ENST00000577862 86 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 MIR7107-201ENST00000611489 80 ntBASIC0.9□□□□□ -2.27
NKX3-2P78367 RNA5SP325-201ENST00000363756 130 ntBASIC0.89□□□□□ -2.27
NKX3-2P78367 SNORD75.2-201ENST00000408784 58 ntBASIC0.89□□□□□ -2.27
NKX3-2P78367 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.89□□□□□ -2.27
NKX3-2P78367 RNU6-1015P-201ENST00000517121 99 ntBASIC0.89□□□□□ -2.27
NKX3-2P78367 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
NKX3-2P78367 SNORD42B-201ENST00000458893 67 ntBASIC0.88□□□□□ -2.27
NKX3-2P78367 RNU6-274P-201ENST00000459566 107 ntBASIC0.88□□□□□ -2.27
NKX3-2P78367 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
NKX3-2P78367 RNU6-687P-201ENST00000516443 89 ntBASIC0.88□□□□□ -2.27
NKX3-2P78367 MIR3675-201ENST00000583661 73 ntBASIC0.88□□□□□ -2.27
NKX3-2P78367 Y_RNA.205-201ENST00000364128 113 ntBASIC0.87□□□□□ -2.27
NKX3-2P78367 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NKX3-2P78367 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.87□□□□□ -2.27
NKX3-2P78367 RNU5B-6P-201ENST00000516765 68 ntBASIC0.87□□□□□ -2.27
NKX3-2P78367 RNA5SP517-201ENST00000364724 117 ntBASIC0.86□□□□□ -2.27
NKX3-2P78367 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
NKX3-2P78367 RNU7-24P-201ENST00000458867 62 ntBASIC0.86□□□□□ -2.27
NKX3-2P78367 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
NKX3-2P78367 RNU6-1241P-201ENST00000384536 107 ntBASIC0.85□□□□□ -2.27
NKX3-2P78367 MIR140-201ENST00000385282 100 ntBASIC0.85□□□□□ -2.27
NKX3-2P78367 AC018659.1-201ENST00000551083 169 ntBASIC0.85□□□□□ -2.27
NKX3-2P78367 MIR4752-201ENST00000579672 72 ntBASIC0.85□□□□□ -2.27
NKX3-2P78367 RNU6-587P-201ENST00000391282 106 ntBASIC0.84□□□□□ -2.27
NKX3-2P78367 MIR936-201ENST00000401264 98 ntBASIC0.84□□□□□ -2.27
NKX3-2P78367 AC073261.1-201ENST00000429409 121 ntBASIC0.84□□□□□ -2.27
NKX3-2P78367 AL691482.2-201ENST00000457453 84 ntBASIC0.84□□□□□ -2.27
NKX3-2P78367 MIR6835-201ENST00000621552 64 ntBASIC0.84□□□□□ -2.27
NKX3-2P78367 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
NKX3-2P78367 MIR203A-201ENST00000384836 110 ntBASIC0.83□□□□□ -2.28
NKX3-2P78367 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
NKX3-2P78367 RNU6-1039P-201ENST00000383931 107 ntBASIC0.82□□□□□ -2.28
NKX3-2P78367 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
NKX3-2P78367 RNU6-752P-201ENST00000516376 102 ntBASIC0.82□□□□□ -2.28
NKX3-2P78367 SNORA70.25-201ENST00000612741 95 ntBASIC0.82□□□□□ -2.28
NKX3-2P78367 AC069503.3-201ENST00000618674 145 ntBASIC0.82□□□□□ -2.28
NKX3-2P78367 SNORD45.1-201ENST00000363181 77 ntBASIC0.81□□□□□ -2.28
NKX3-2P78367 MIR154-201ENST00000385243 84 ntBASIC0.81□□□□□ -2.28
NKX3-2P78367 AC069271.1-201ENST00000445577 156 ntBASIC0.81□□□□□ -2.28
NKX3-2P78367 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
NKX3-2P78367 MIR6509-201ENST00000614603 85 ntBASIC0.81□□□□□ -2.28
NKX3-2P78367 AC092634.7-201ENST00000621022 103 ntBASIC0.81□□□□□ -2.28
NKX3-2P78367 SNORD115-31-201ENST00000365318 82 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 AC006210.1-201ENST00000424882 111 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 RNU1-29P-201ENST00000606574 126 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 AC073869.9-201ENST00000641610 120 ntBASIC0.8□□□□□ -2.28
NKX3-2P78367 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
NKX3-2P78367 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
NKX3-2P78367 SNORD110-201ENST00000408189 75 ntBASIC0.79□□□□□ -2.28
NKX3-2P78367 RNU6-634P-201ENST00000459134 106 ntBASIC0.79□□□□□ -2.28
NKX3-2P78367 RNU6-990P-201ENST00000364385 104 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 SNORD45A-201ENST00000384512 84 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 RNU6-604P-201ENST00000390917 100 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 MIR4711-201ENST00000578274 70 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 MIR4473-201ENST00000583731 91 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
NKX3-2P78367 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
NKX3-2P78367 SNORD118-201ENST00000363593 134 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 SNORD115-22-201ENST00000364456 82 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 RNU6-110P-201ENST00000384508 104 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 AC139453.2-201ENST00000487255 133 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 SNORA40.17-201ENST00000517256 115 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 MIR548AE1-201ENST00000583292 70 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.77□□□□□ -2.29
NKX3-2P78367 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
NKX3-2P78367 RNU6-260P-201ENST00000384092 107 ntBASIC0.76□□□□□ -2.29
NKX3-2P78367 RNU6-540P-201ENST00000384622 101 ntBASIC0.76□□□□□ -2.29
NKX3-2P78367 SNORA40.8-201ENST00000411034 126 ntBASIC0.76□□□□□ -2.29
NKX3-2P78367 RNU6-871P-201ENST00000516122 100 ntBASIC0.76□□□□□ -2.29
NKX3-2P78367 MIR3657-201ENST00000584818 117 ntBASIC0.76□□□□□ -2.29
NKX3-2P78367 AC114801.3-201ENST00000510231 177 ntBASIC0.75□□□□□ -2.29
NKX3-2P78367 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
NKX3-2P78367 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
NKX3-2P78367 AC010487.4-201ENST00000637027 61 ntBASIC0.74□□□□□ -2.29
NKX3-2P78367 Y_RNA.407-201ENST00000383986 113 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 MIR193B-201ENST00000384907 83 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 MIR518A1-201ENST00000385068 85 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 MIR652-201ENST00000385278 98 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 HMGN2P22-201ENST00000427588 175 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 RNA5SP147-201ENST00000516493 109 ntBASIC0.73□□□□□ -2.29
NKX3-2P78367 MIR1273G-201ENST00000577677 100 ntBASIC0.72□□□□□ -2.29
NKX3-2P78367 MIR8053-201ENST00000613344 75 ntBASIC0.72□□□□□ -2.29
NKX3-2P78367 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
NKX3-2P78367 SNORD113.1-201ENST00000363280 73 ntBASIC0.71□□□□□ -2.3
NKX3-2P78367 RNA5SP457-201ENST00000363657 124 ntBASIC0.71□□□□□ -2.3
NKX3-2P78367 Y_RNA.423-201ENST00000384057 113 ntBASIC0.71□□□□□ -2.3
NKX3-2P78367 RNU6-982P-201ENST00000516216 102 ntBASIC0.71□□□□□ -2.3
NKX3-2P78367 RNU6-1232P-201ENST00000516299 86 ntBASIC0.71□□□□□ -2.3
NKX3-2P78367 RNU6-881P-201ENST00000516813 102 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 925.1 ms