Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 RNU6-1049P-201ENST00000516414 107 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 MIR5706-201ENST00000579841 80 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 MIR1297-201ENST00000637311 77 ntBASIC0.72□□□□□ -2.29
COL6A2P12110 RNU6-495P-201ENST00000362995 107 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 RNA5SP457-201ENST00000363657 124 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 RNU6-824P-201ENST00000363724 104 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 AC074348.1-201ENST00000426503 132 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 AC098934.3-201ENST00000430450 190 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 SNORA25.18-201ENST00000607153 114 ntBASIC0.71□□□□□ -2.3
COL6A2P12110 Y_RNA.178-201ENST00000363832 102 ntBASIC0.7□□□□□ -2.3
COL6A2P12110 AC069271.1-201ENST00000445577 156 ntBASIC0.7□□□□□ -2.3
COL6A2P12110 RNU6-638P-201ENST00000516582 104 ntBASIC0.7□□□□□ -2.3
COL6A2P12110 NAMPTP3-201ENST00000569273 224 ntBASIC0.7□□□□□ -2.3
COL6A2P12110 RNU6V-201ENST00000384105 107 ntBASIC0.69□□□□□ -2.3
COL6A2P12110 SNORD75.2-201ENST00000408784 58 ntBASIC0.69□□□□□ -2.3
COL6A2P12110 RNU1-29P-201ENST00000606574 126 ntBASIC0.69□□□□□ -2.3
COL6A2P12110 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
COL6A2P12110 Y_RNA.258-201ENST00000364613 105 ntBASIC0.68□□□□□ -2.3
COL6A2P12110 Y_RNA.371-201ENST00000365591 113 ntBASIC0.68□□□□□ -2.3
COL6A2P12110 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
COL6A2P12110 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
COL6A2P12110 RNU6-807P-201ENST00000516805 107 ntBASIC0.68□□□□□ -2.3
COL6A2P12110 Y_RNA.115-201ENST00000363272 98 ntBASIC0.67□□□□□ -2.3
COL6A2P12110 Y_RNA.532-201ENST00000384590 113 ntBASIC0.67□□□□□ -2.3
COL6A2P12110 SNORD110-201ENST00000408189 75 ntBASIC0.67□□□□□ -2.3
COL6A2P12110 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
COL6A2P12110 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
COL6A2P12110 SNORD114-23-201ENST00000363536 72 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 RNU6-382P-201ENST00000365181 106 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 RNU6-54P-201ENST00000365563 107 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 AC006210.1-201ENST00000424882 111 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 SNORA70.25-201ENST00000612741 95 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 MIR924-201ENST00000638017 53 ntBASIC0.66□□□□□ -2.3
COL6A2P12110 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
COL6A2P12110 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
COL6A2P12110 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
COL6A2P12110 MIR4752-201ENST00000579672 72 ntBASIC0.65□□□□□ -2.31
COL6A2P12110 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
COL6A2P12110 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
COL6A2P12110 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
COL6A2P12110 Y_RNA.68-201ENST00000362881 102 ntBASIC0.64□□□□□ -2.31
COL6A2P12110 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
COL6A2P12110 RNU6-752P-201ENST00000516376 102 ntBASIC0.64□□□□□ -2.31
COL6A2P12110 Y_RNA.681-201ENST00000516445 113 ntBASIC0.64□□□□□ -2.31
COL6A2P12110 Y_RNA.244-201ENST00000364484 109 ntBASIC0.63□□□□□ -2.31
COL6A2P12110 SNORA2A-201ENST00000383885 135 ntBASIC0.63□□□□□ -2.31
COL6A2P12110 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
COL6A2P12110 RNA5SP330-201ENST00000517096 96 ntBASIC0.63□□□□□ -2.31
COL6A2P12110 U7.6-201ENST00000610841 64 ntBASIC0.63□□□□□ -2.31
COL6A2P12110 MIR4773-1-201ENST00000637203 78 ntBASIC0.63□□□□□ -2.31
COL6A2P12110 SNORD44.1-201ENST00000363202 61 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 SNORD114-4-201ENST00000363962 75 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 RNU6-154P-201ENST00000384306 106 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 SNORD42B-201ENST00000458893 67 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 RNU6-274P-201ENST00000459566 107 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 AC145423.2-201ENST00000610631 239 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 U7.4-201ENST00000614961 63 ntBASIC0.62□□□□□ -2.31
COL6A2P12110 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
COL6A2P12110 AL109933.3-201ENST00000619095 188 ntBASIC0.61□□□□□ -2.31
COL6A2P12110 MIR6755-201ENST00000619993 66 ntBASIC0.61□□□□□ -2.31
COL6A2P12110 Y_RNA.407-201ENST00000383986 113 ntBASIC0.6□□□□□ -2.31
COL6A2P12110 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
COL6A2P12110 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.6□□□□□ -2.31
COL6A2P12110 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
COL6A2P12110 MIR4662A-201ENST00000637499 67 ntBASIC0.6□□□□□ -2.31
COL6A2P12110 Y_RNA.125-201ENST00000363371 111 ntBASIC0.59□□□□□ -2.31
COL6A2P12110 RNU6-1039P-201ENST00000383931 107 ntBASIC0.59□□□□□ -2.31
COL6A2P12110 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
COL6A2P12110 HMGN2P22-201ENST00000427588 175 ntBASIC0.59□□□□□ -2.31
COL6A2P12110 SCARNA18B-201ENST00000458806 135 ntBASIC0.59□□□□□ -2.31
COL6A2P12110 MIR5087-201ENST00000635826 76 ntBASIC0.59□□□□□ -2.31
COL6A2P12110 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
COL6A2P12110 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
COL6A2P12110 Y_RNA.433-201ENST00000384089 102 ntBASIC0.58□□□□□ -2.32
COL6A2P12110 RNA5SP193-201ENST00000410353 107 ntBASIC0.58□□□□□ -2.32
COL6A2P12110 MIR8087-201ENST00000612745 78 ntBASIC0.58□□□□□ -2.32
COL6A2P12110 AL691482.2-201ENST00000457453 84 ntBASIC0.57□□□□□ -2.32
COL6A2P12110 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
COL6A2P12110 MIR4484-201ENST00000582855 83 ntBASIC0.57□□□□□ -2.32
COL6A2P12110 MIR3675-201ENST00000583661 73 ntBASIC0.57□□□□□ -2.32
COL6A2P12110 uc_338.10-201ENST00000621872 182 ntBASIC0.57□□□□□ -2.32
COL6A2P12110 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
COL6A2P12110 MIR330-201ENST00000362196 94 ntBASIC0.56□□□□□ -2.32
COL6A2P12110 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.56□□□□□ -2.32
COL6A2P12110 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.56□□□□□ -2.32
COL6A2P12110 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
COL6A2P12110 RNU6-330P-201ENST00000363015 107 ntBASIC0.55□□□□□ -2.32
COL6A2P12110 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
COL6A2P12110 SNORA68.3-201ENST00000515906 83 ntBASIC0.55□□□□□ -2.32
COL6A2P12110 MIRLET7D-201ENST00000362263 87 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 RNU6-260P-201ENST00000384092 107 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 SNORA8.1-201ENST00000384250 140 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
COL6A2P12110 SCARNA17.3-201ENST00000516381 125 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms