Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
SRFP11831 RNU6-260P-201ENST00000384092 107 ntBASIC1.27□□□□□ -2.21
SRFP11831 SNORD124-201ENST00000459577 104 ntBASIC1.27□□□□□ -2.21
SRFP11831 MIR4460-201ENST00000577862 86 ntBASIC1.27□□□□□ -2.21
SRFP11831 RN7SL793P-201ENST00000583259 296 ntBASIC1.27□□□□□ -2.21
SRFP11831 AC073869.9-201ENST00000641610 120 ntBASIC1.27□□□□□ -2.21
SRFP11831 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.26□□□□□ -2.21
SRFP11831 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SRFP11831 RNU6-614P-201ENST00000384369 107 ntBASIC1.26□□□□□ -2.21
SRFP11831 MIR548C-201ENST00000384815 97 ntBASIC1.26□□□□□ -2.21
SRFP11831 RNU6-955P-201ENST00000410497 104 ntBASIC1.26□□□□□ -2.21
SRFP11831 AC025627.3-201ENST00000582078 182 ntBASIC1.26□□□□□ -2.21
SRFP11831 U6.59-201ENST00000615686 107 ntBASIC1.26□□□□□ -2.21
SRFP11831 AC092634.7-201ENST00000621022 103 ntBASIC1.26□□□□□ -2.21
SRFP11831 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
SRFP11831 MIR548V-201ENST00000584165 80 ntBASIC1.25□□□□□ -2.21
SRFP11831 SNORD28-201ENST00000384706 75 ntBASIC1.24□□□□□ -2.21
SRFP11831 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
SRFP11831 snoU13.13-201ENST00000458842 104 ntBASIC1.24□□□□□ -2.21
SRFP11831 RNU7-74P-201ENST00000459104 62 ntBASIC1.24□□□□□ -2.21
SRFP11831 RNU6-542P-201ENST00000516405 103 ntBASIC1.24□□□□□ -2.21
SRFP11831 RNU5B-6P-201ENST00000516765 68 ntBASIC1.24□□□□□ -2.21
SRFP11831 MIR4639-201ENST00000584938 69 ntBASIC1.24□□□□□ -2.21
SRFP11831 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SRFP11831 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
SRFP11831 RNA5SP457-201ENST00000363657 124 ntBASIC1.23□□□□□ -2.21
SRFP11831 RNA5SP192-201ENST00000364404 120 ntBASIC1.23□□□□□ -2.21
SRFP11831 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
SRFP11831 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
SRFP11831 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
SRFP11831 RNU6-1079P-201ENST00000362861 110 ntBASIC1.22□□□□□ -2.21
SRFP11831 Y_RNA.375-201ENST00000365625 101 ntBASIC1.22□□□□□ -2.21
SRFP11831 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SRFP11831 RNA5SP299-201ENST00000391203 116 ntBASIC1.22□□□□□ -2.21
SRFP11831 AC079150.2-201ENST00000443733 78 ntBASIC1.22□□□□□ -2.21
SRFP11831 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.22□□□□□ -2.21
SRFP11831 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
SRFP11831 SNORD18A-201ENST00000363753 72 ntBASIC1.21□□□□□ -2.22
SRFP11831 MIR573-201ENST00000384964 99 ntBASIC1.21□□□□□ -2.22
SRFP11831 MT-TY-201ENST00000387409 66 ntBASIC1.21□□□□□ -2.22
SRFP11831 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.21□□□□□ -2.22
SRFP11831 MIR3612-201ENST00000579753 87 ntBASIC1.21□□□□□ -2.22
SRFP11831 SNORA2.1-201ENST00000363089 137 ntBASIC1.2□□□□□ -2.22
SRFP11831 SNORA25.5-201ENST00000363782 126 ntBASIC1.2□□□□□ -2.22
SRFP11831 MIR216A-201ENST00000385063 110 ntBASIC1.2□□□□□ -2.22
SRFP11831 SNORD41.1-201ENST00000391000 69 ntBASIC1.2□□□□□ -2.22
SRFP11831 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
SRFP11831 MIR3678-201ENST00000578455 94 ntBASIC1.2□□□□□ -2.22
SRFP11831 MIR466-201ENST00000580653 84 ntBASIC1.2□□□□□ -2.22
SRFP11831 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.2□□□□□ -2.22
SRFP11831 RNU6-726P-201ENST00000364680 107 ntBASIC1.19□□□□□ -2.22
SRFP11831 RNU6-141P-201ENST00000410499 105 ntBASIC1.19□□□□□ -2.22
SRFP11831 RNU6-656P-201ENST00000516785 107 ntBASIC1.19□□□□□ -2.22
SRFP11831 SNORA40.17-201ENST00000517256 115 ntBASIC1.19□□□□□ -2.22
SRFP11831 MIR7974-201ENST00000615835 79 ntBASIC1.19□□□□□ -2.22
SRFP11831 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SRFP11831 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
SRFP11831 RNU1-141P-201ENST00000364623 158 ntBASIC1.18□□□□□ -2.22
SRFP11831 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
SRFP11831 RNU6-669P-201ENST00000365575 107 ntBASIC1.18□□□□□ -2.22
SRFP11831 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
SRFP11831 RNU6-269P-201ENST00000391077 97 ntBASIC1.18□□□□□ -2.22
SRFP11831 RNA5SP484-201ENST00000458857 111 ntBASIC1.18□□□□□ -2.22
SRFP11831 SCARNA21.1-201ENST00000515996 128 ntBASIC1.18□□□□□ -2.22
SRFP11831 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
SRFP11831 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
SRFP11831 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
SRFP11831 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
SRFP11831 RNU6-1089P-201ENST00000516473 104 ntBASIC1.17□□□□□ -2.22
SRFP11831 RNA5SP47-201ENST00000517230 109 ntBASIC1.17□□□□□ -2.22
SRFP11831 AC018659.1-201ENST00000551083 169 ntBASIC1.17□□□□□ -2.22
SRFP11831 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SRFP11831 RNU6-829P-201ENST00000363700 112 ntBASIC1.16□□□□□ -2.22
SRFP11831 AL157398.1-201ENST00000452981 186 ntBASIC1.16□□□□□ -2.22
SRFP11831 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
SRFP11831 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SRFP11831 SNORD99-201ENST00000408612 74 ntBASIC1.15□□□□□ -2.23
SRFP11831 Y_RNA.115-201ENST00000363272 98 ntBASIC1.14□□□□□ -2.23
SRFP11831 RNU6-940P-201ENST00000363433 104 ntBASIC1.14□□□□□ -2.23
SRFP11831 RNU6-1162P-201ENST00000384443 104 ntBASIC1.14□□□□□ -2.23
SRFP11831 MIR193B-201ENST00000384907 83 ntBASIC1.14□□□□□ -2.23
SRFP11831 MIR630-201ENST00000384957 97 ntBASIC1.14□□□□□ -2.23
SRFP11831 SNORA75.1-201ENST00000391130 148 ntBASIC1.14□□□□□ -2.23
SRFP11831 AC021146.9-201ENST00000512503 156 ntBASIC1.14□□□□□ -2.23
SRFP11831 MIR4473-201ENST00000583731 91 ntBASIC1.14□□□□□ -2.23
SRFP11831 RNA5SP62-201ENST00000363457 110 ntBASIC1.13□□□□□ -2.23
SRFP11831 SNORD114-4-201ENST00000363962 75 ntBASIC1.13□□□□□ -2.23
SRFP11831 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
SRFP11831 RNA5SP227-201ENST00000516184 113 ntBASIC1.13□□□□□ -2.23
SRFP11831 SCARNA16.5-201ENST00000517114 183 ntBASIC1.13□□□□□ -2.23
SRFP11831 MIR1273G-201ENST00000577677 100 ntBASIC1.13□□□□□ -2.23
SRFP11831 AC211469.2-201ENST00000605461 205 ntBASIC1.13□□□□□ -2.23
SRFP11831 MIR6739-201ENST00000622461 75 ntBASIC1.13□□□□□ -2.23
SRFP11831 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SRFP11831 RNA5SP215-201ENST00000363440 122 ntBASIC1.12□□□□□ -2.23
SRFP11831 Y_RNA.236-201ENST00000364427 111 ntBASIC1.11□□□□□ -2.23
SRFP11831 SNORA8.2-201ENST00000384372 139 ntBASIC1.11□□□□□ -2.23
SRFP11831 AC098934.3-201ENST00000430450 190 ntBASIC1.11□□□□□ -2.23
SRFP11831 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
SRFP11831 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms