Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.68□□□□□ -2.68
FREM3P0C091 MIR548D2-201ENST00000384955 97 ntBASIC-1.68□□□□□ -2.68
FREM3P0C091 MIR1302-6-201ENST00000408466 90 ntBASIC-1.68□□□□□ -2.68
FREM3P0C091 RNU6-988P-201ENST00000519081 107 ntBASIC-1.68□□□□□ -2.68
FREM3P0C091 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.69□□□□□ -2.68
FREM3P0C091 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.69□□□□□ -2.68
FREM3P0C091 RNU6-713P-201ENST00000384761 107 ntBASIC-1.69□□□□□ -2.68
FREM3P0C091 FGF7P7-201ENST00000514120 227 ntBASIC-1.69□□□□□ -2.68
FREM3P0C091 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.69□□□□□ -2.68
FREM3P0C091 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.69□□□□□ -2.68
FREM3P0C091 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 RNY3P1-201ENST00000365085 102 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 SNORD116-4-201ENST00000384733 96 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 RNU2-38P-201ENST00000410856 79 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 MTND2P23-201ENST00000422990 651 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 MTND1P19-201ENST00000511780 315 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
FREM3P0C091 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 MIR521-2-201ENST00000384818 87 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 MIR548Q-201ENST00000408404 100 ntBASIC-1.7□□□□□ -2.68
FREM3P0C091 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 RNA5SP292-201ENST00000390974 118 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 RNU6-876P-201ENST00000391295 104 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 RNY3P16-201ENST00000516338 101 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 AL160413.1-201ENST00000622780 310 ntBASIC-1.71□□□□□ -2.68
FREM3P0C091 RNA5SP405-201ENST00000363059 114 ntBASIC-1.72□□□□□ -2.68
FREM3P0C091 MIR3064-201ENST00000581130 66 ntBASIC-1.72□□□□□ -2.68
FREM3P0C091 MIR4773-1-201ENST00000637203 78 ntBASIC-1.72□□□□□ -2.68
FREM3P0C091 MIR1302-1-201ENST00000637932 143 ntBASIC-1.72□□□□□ -2.68
FREM3P0C091 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.72□□□□□ -2.69
FREM3P0C091 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.72□□□□□ -2.69
FREM3P0C091 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.72□□□□□ -2.69
FREM3P0C091 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.72□□□□□ -2.69
FREM3P0C091 snoU13.17-201ENST00000458802 104 ntBASIC-1.72□□□□□ -2.69
FREM3P0C091 AC130289.1-201ENST00000577321 73 ntBASIC-1.72□□□□□ -2.69
FREM3P0C091 RNA5SP26-201ENST00000362406 119 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 AL021921.1-201ENST00000442774 93 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 AC006254.2-201ENST00000603259 279 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.73□□□□□ -2.69
FREM3P0C091 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.73□□□□□ -2.69
FREM3P0C091 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.74□□□□□ -2.69
FREM3P0C091 RNU6-400P-201ENST00000391173 106 ntBASIC-1.74□□□□□ -2.69
FREM3P0C091 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.74□□□□□ -2.69
FREM3P0C091 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 RNU6-238P-201ENST00000363313 106 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 RNU6-695P-201ENST00000391157 104 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 MTND3P2-201ENST00000438452 342 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 SNORD4B-201ENST00000459083 72 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 RNU6-382P-201ENST00000365181 106 ntBASIC-1.75□□□□□ -2.69
FREM3P0C091 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.75□□□□□ -2.69
FREM3P0C091 RNU6-275P-201ENST00000364910 107 ntBASIC-1.76□□□□□ -2.69
FREM3P0C091 AC120024.2-201ENST00000576526 175 ntBASIC-1.76□□□□□ -2.69
FREM3P0C091 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.77□□□□□ -2.69
FREM3P0C091 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.77□□□□□ -2.69
FREM3P0C091 RNU4-71P-201ENST00000516258 113 ntBASIC-1.77□□□□□ -2.69
FREM3P0C091 SNORA24B-201ENST00000384176 131 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 AC090616.4-201ENST00000448026 115 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 MIR4680-201ENST00000580906 66 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 AC134503.1-201ENST00000633048 54 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 MIR3658-201ENST00000636291 56 ntBASIC-1.78□□□□□ -2.69
FREM3P0C091 SNORD45B-201ENST00000364617 72 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 MT-TM-201ENST00000387377 68 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 SNORA7.5-201ENST00000410672 110 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 RNA5SP136-201ENST00000410906 107 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 SNORD19-201ENST00000391191 68 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 RNU6-752P-201ENST00000516376 102 ntBASIC-1.79□□□□□ -2.7
FREM3P0C091 SNORD115-22-201ENST00000364456 82 ntBASIC-1.8□□□□□ -2.7
FREM3P0C091 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.8□□□□□ -2.7
FREM3P0C091 AL118496.2-201ENST00000448300 230 ntBASIC-1.8□□□□□ -2.7
FREM3P0C091 SNORD127-201ENST00000458892 86 ntBASIC-1.8□□□□□ -2.7
FREM3P0C091 RNU6-168P-201ENST00000516189 101 ntBASIC-1.8□□□□□ -2.7
FREM3P0C091 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 MIR5683-201ENST00000636514 76 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 U6.104-201ENST00000637979 90 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-681P-201ENST00000364012 104 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-816P-201ENST00000390914 107 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-239P-201ENST00000390990 99 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-460P-201ENST00000391158 108 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-635P-201ENST00000516651 102 ntBASIC-1.81□□□□□ -2.7
FREM3P0C091 RNU6-246P-201ENST00000384702 107 ntBASIC-1.82□□□□□ -2.7
FREM3P0C091 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 269 ms