Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR3675-201ENST00000583661 73 ntBASIC0.77□□□□□ -2.29
NPHS1O60500 RNU1-29P-201ENST00000606574 126 ntBASIC0.77□□□□□ -2.29
NPHS1O60500 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
NPHS1O60500 RNU6-523P-201ENST00000516304 54 ntBASIC0.76□□□□□ -2.29
NPHS1O60500 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
NPHS1O60500 RNU6-1039P-201ENST00000383931 107 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 RNU6-411P-201ENST00000384451 107 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 Y_RNA.545-201ENST00000384652 105 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
NPHS1O60500 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 RNU6-752P-201ENST00000516376 102 ntBASIC0.75□□□□□ -2.29
NPHS1O60500 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.75□□□□□ -2.29
NPHS1O60500 MIR203A-201ENST00000384836 110 ntBASIC0.74□□□□□ -2.29
NPHS1O60500 SNORD71-201ENST00000411292 86 ntBASIC0.74□□□□□ -2.29
NPHS1O60500 MIR4473-201ENST00000583731 91 ntBASIC0.74□□□□□ -2.29
NPHS1O60500 MIR6509-201ENST00000614603 85 ntBASIC0.74□□□□□ -2.29
NPHS1O60500 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
NPHS1O60500 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
NPHS1O60500 RPS29P1-201ENST00000465274 159 ntBASIC0.73□□□□□ -2.29
NPHS1O60500 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
NPHS1O60500 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.73□□□□□ -2.29
NPHS1O60500 MIR6767-201ENST00000637302 66 ntBASIC0.73□□□□□ -2.29
NPHS1O60500 MIR96-201ENST00000362288 78 ntBASIC0.72□□□□□ -2.29
NPHS1O60500 RNU6-42P-201ENST00000384165 107 ntBASIC0.72□□□□□ -2.29
NPHS1O60500 RNU6-687P-201ENST00000516443 89 ntBASIC0.72□□□□□ -2.29
NPHS1O60500 RNU6-1015P-201ENST00000517121 99 ntBASIC0.72□□□□□ -2.29
NPHS1O60500 MIR548AE1-201ENST00000583292 70 ntBASIC0.72□□□□□ -2.29
NPHS1O60500 Y_RNA.118-201ENST00000363300 101 ntBASIC0.71□□□□□ -2.3
NPHS1O60500 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
NPHS1O60500 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
NPHS1O60500 Y_RNA.423-201ENST00000384057 113 ntBASIC0.71□□□□□ -2.3
NPHS1O60500 AC098934.3-201ENST00000430450 190 ntBASIC0.71□□□□□ -2.3
NPHS1O60500 RNU6-1241P-201ENST00000384536 107 ntBASIC0.7□□□□□ -2.3
NPHS1O60500 MIR520E-201ENST00000384867 87 ntBASIC0.7□□□□□ -2.3
NPHS1O60500 RNU6-587P-201ENST00000391282 106 ntBASIC0.7□□□□□ -2.3
NPHS1O60500 SNORD45.1-201ENST00000363181 77 ntBASIC0.69□□□□□ -2.3
NPHS1O60500 RNU6-990P-201ENST00000364385 104 ntBASIC0.69□□□□□ -2.3
NPHS1O60500 Y_RNA.407-201ENST00000383986 113 ntBASIC0.69□□□□□ -2.3
NPHS1O60500 HMGN2P22-201ENST00000427588 175 ntBASIC0.69□□□□□ -2.3
NPHS1O60500 RNU6-1232P-201ENST00000516299 86 ntBASIC0.69□□□□□ -2.3
NPHS1O60500 MIR5706-201ENST00000579841 80 ntBASIC0.69□□□□□ -2.3
NPHS1O60500 SNORD114-4-201ENST00000363962 75 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 SNORA2A-201ENST00000383885 135 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 RNU6-260P-201ENST00000384092 107 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 MIR652-201ENST00000385278 98 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 MIR3657-201ENST00000584818 117 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 MIR6755-201ENST00000619993 66 ntBASIC0.68□□□□□ -2.3
NPHS1O60500 MIR154-201ENST00000385243 84 ntBASIC0.67□□□□□ -2.3
NPHS1O60500 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
NPHS1O60500 SNORA40.17-201ENST00000517256 115 ntBASIC0.67□□□□□ -2.3
NPHS1O60500 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
NPHS1O60500 RNU6-604P-201ENST00000390917 100 ntBASIC0.66□□□□□ -2.3
NPHS1O60500 MIR151B-201ENST00000584249 96 ntBASIC0.66□□□□□ -2.3
NPHS1O60500 snoU13.18-201ENST00000459483 104 ntBASIC0.65□□□□□ -2.31
NPHS1O60500 MIR6788-201ENST00000618842 66 ntBASIC0.65□□□□□ -2.31
NPHS1O60500 Y_RNA.125-201ENST00000363371 111 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 SNORD115-22-201ENST00000364456 82 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 SNORD115-31-201ENST00000365318 82 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 SNORD45A-201ENST00000384512 84 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 RNU6-634P-201ENST00000459134 106 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 SCARNA17.3-201ENST00000516381 125 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 uc_338.10-201ENST00000621872 182 ntBASIC0.64□□□□□ -2.31
NPHS1O60500 SNORD44.1-201ENST00000363202 61 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 MIR548J-201ENST00000408833 112 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 RNA5SP147-201ENST00000516493 109 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 RNU6-1223P-201ENST00000517124 104 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
NPHS1O60500 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
NPHS1O60500 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
NPHS1O60500 Y_RNA.355-201ENST00000365462 98 ntBASIC0.62□□□□□ -2.31
NPHS1O60500 MIR760-201ENST00000390220 80 ntBASIC0.62□□□□□ -2.31
NPHS1O60500 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
NPHS1O60500 SNORA2.1-201ENST00000363089 137 ntBASIC0.61□□□□□ -2.31
NPHS1O60500 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.61□□□□□ -2.31
NPHS1O60500 RNU6-871P-201ENST00000516122 100 ntBASIC0.61□□□□□ -2.31
NPHS1O60500 U7.6-201ENST00000610841 64 ntBASIC0.61□□□□□ -2.31
NPHS1O60500 MIR8053-201ENST00000613344 75 ntBASIC0.61□□□□□ -2.31
NPHS1O60500 MIR582-201ENST00000365731 98 ntBASIC0.6□□□□□ -2.31
NPHS1O60500 MIR7-2-201ENST00000384970 110 ntBASIC0.6□□□□□ -2.31
NPHS1O60500 MIR501-201ENST00000390204 84 ntBASIC0.6□□□□□ -2.31
NPHS1O60500 AC073261.1-201ENST00000429409 121 ntBASIC0.6□□□□□ -2.31
NPHS1O60500 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
NPHS1O60500 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 snoU13.13-201ENST00000458842 104 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 RNU6-848P-201ENST00000515948 107 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 RNU6-617P-201ENST00000516147 107 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 RNU6-473P-201ENST00000516164 107 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 RNU6-1049P-201ENST00000516414 107 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
NPHS1O60500 MIR103A1-201ENST00000362165 78 ntBASIC0.58□□□□□ -2.32
NPHS1O60500 SNORD113.1-201ENST00000363280 73 ntBASIC0.58□□□□□ -2.32
NPHS1O60500 MIR516B1-201ENST00000385211 90 ntBASIC0.58□□□□□ -2.32
NPHS1O60500 RNU6-982P-201ENST00000516216 102 ntBASIC0.58□□□□□ -2.32
NPHS1O60500 RNU6-881P-201ENST00000516813 102 ntBASIC0.58□□□□□ -2.32
NPHS1O60500 MIR4677-201ENST00000584153 80 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms