Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 RNU6-752P-201ENST00000516376 102 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 MIR548O2-201ENST00000616090 70 ntBASIC0.93□□□□□ -2.26
TRIM38O00635 RNU6-1216P-201ENST00000362590 107 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 RNU6-1039P-201ENST00000383931 107 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 MIR203A-201ENST00000384836 110 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 AL691482.2-201ENST00000457453 84 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 RNU7-24P-201ENST00000458867 62 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 AC002350.1-201ENST00000490759 375 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
TRIM38O00635 SNORD42B-201ENST00000458893 67 ntBASIC0.91□□□□□ -2.26
TRIM38O00635 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
TRIM38O00635 AC093423.1-201ENST00000440817 142 ntBASIC0.9□□□□□ -2.27
TRIM38O00635 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
TRIM38O00635 SNORA40.17-201ENST00000517256 115 ntBASIC0.9□□□□□ -2.27
TRIM38O00635 MIR4511-201ENST00000582784 87 ntBASIC0.9□□□□□ -2.27
TRIM38O00635 RNU6V-201ENST00000384105 107 ntBASIC0.89□□□□□ -2.27
TRIM38O00635 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
TRIM38O00635 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
TRIM38O00635 MIR6509-201ENST00000614603 85 ntBASIC0.89□□□□□ -2.27
TRIM38O00635 MIR6779-201ENST00000617283 64 ntBASIC0.89□□□□□ -2.27
TRIM38O00635 AC244669.1-204ENST00000621564 178 ntBASIC0.89□□□□□ -2.27
TRIM38O00635 AC067863.3-201ENST00000624172 122 ntBASIC0.89□□□□□ -2.27
TRIM38O00635 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
TRIM38O00635 SNORD28-201ENST00000384706 75 ntBASIC0.88□□□□□ -2.27
TRIM38O00635 SNORD41.1-201ENST00000391000 69 ntBASIC0.88□□□□□ -2.27
TRIM38O00635 MIR216B-201ENST00000390186 82 ntBASIC0.87□□□□□ -2.27
TRIM38O00635 MIR3657-201ENST00000584818 117 ntBASIC0.87□□□□□ -2.27
TRIM38O00635 SNORD18A-201ENST00000363753 72 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 RNU6-990P-201ENST00000364385 104 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 RNU6-726P-201ENST00000364680 107 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 RNA5SP117-201ENST00000365294 118 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 AC110620.1-201ENST00000416042 228 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 MIR4639-201ENST00000584938 69 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 AC103706.3-201ENST00000636297 85 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 AC073869.9-201ENST00000641610 120 ntBASIC0.86□□□□□ -2.27
TRIM38O00635 MIR573-201ENST00000384964 99 ntBASIC0.85□□□□□ -2.27
TRIM38O00635 RNA5SP47-201ENST00000517230 109 ntBASIC0.85□□□□□ -2.27
TRIM38O00635 AC011195.1-201ENST00000578177 177 ntBASIC0.85□□□□□ -2.27
TRIM38O00635 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
TRIM38O00635 RNU6-499P-201ENST00000365615 107 ntBASIC0.84□□□□□ -2.27
TRIM38O00635 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.27
TRIM38O00635 RNU6-260P-201ENST00000384092 107 ntBASIC0.84□□□□□ -2.27
TRIM38O00635 MT-TY-201ENST00000387409 66 ntBASIC0.84□□□□□ -2.27
TRIM38O00635 MTND4LP19-201ENST00000403051 166 ntBASIC0.84□□□□□ -2.27
TRIM38O00635 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 RNU6-645P-201ENST00000364649 106 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 RNU6-669P-201ENST00000365575 107 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 RNA5SP147-201ENST00000516493 109 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 RNU6-135P-201ENST00000516769 101 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.83□□□□□ -2.28
TRIM38O00635 MIR3678-201ENST00000578455 94 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 MIR3612-201ENST00000579753 87 ntBASIC0.83□□□□□ -2.28
TRIM38O00635 RNA5SP325-201ENST00000363756 130 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 RNU6-668P-201ENST00000364180 107 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 RNU1-141P-201ENST00000364623 158 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 Y_RNA.375-201ENST00000365625 101 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 MIR633-201ENST00000384821 98 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 RNU6-269P-201ENST00000391077 97 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 RNU6-656P-201ENST00000516785 107 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 MIR4460-201ENST00000577862 86 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 AC069503.3-201ENST00000618674 145 ntBASIC0.82□□□□□ -2.28
TRIM38O00635 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
TRIM38O00635 SNORA2.1-201ENST00000363089 137 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 MIR548L-201ENST00000408303 86 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 MTND4LP1-201ENST00000446263 157 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 RNA5SP484-201ENST00000458857 111 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 RNU7-74P-201ENST00000459104 62 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 RNU5B-6P-201ENST00000516765 68 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 AC092634.7-201ENST00000621022 103 ntBASIC0.81□□□□□ -2.28
TRIM38O00635 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRIM38O00635 RNU6-987P-201ENST00000384759 104 ntBASIC0.8□□□□□ -2.28
TRIM38O00635 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
TRIM38O00635 SCARNA16.5-201ENST00000517114 183 ntBASIC0.8□□□□□ -2.28
TRIM38O00635 SNORA36.1-201ENST00000363424 132 ntBASIC0.79□□□□□ -2.28
TRIM38O00635 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
TRIM38O00635 AC079150.2-201ENST00000443733 78 ntBASIC0.79□□□□□ -2.28
TRIM38O00635 snoU13.13-201ENST00000458842 104 ntBASIC0.79□□□□□ -2.28
TRIM38O00635 MIR6739-201ENST00000622461 75 ntBASIC0.79□□□□□ -2.28
TRIM38O00635 AL162376.1-201ENST00000624117 175 ntBASIC0.79□□□□□ -2.28
TRIM38O00635 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRIM38O00635 SNORA8.2-201ENST00000384372 139 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
TRIM38O00635 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 RNU4-37P-201ENST00000410214 84 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 RNU6-542P-201ENST00000516405 103 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 RN7SL793P-201ENST00000583259 296 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
TRIM38O00635 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
TRIM38O00635 RNA5SP192-201ENST00000364404 120 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms