Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MIR6857-201ENST00000613267 93 ntBASIC1.2□□□□□ -2.22
USP17L3A6NCW0 MIR140-201ENST00000385282 100 ntBASIC1.19□□□□□ -2.22
USP17L3A6NCW0 RNA5SP484-201ENST00000458857 111 ntBASIC1.19□□□□□ -2.22
USP17L3A6NCW0 RNU6-523P-201ENST00000516304 54 ntBASIC1.19□□□□□ -2.22
USP17L3A6NCW0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.19□□□□□ -2.22
USP17L3A6NCW0 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
USP17L3A6NCW0 MIR7107-201ENST00000611489 80 ntBASIC1.19□□□□□ -2.22
USP17L3A6NCW0 MIR154-201ENST00000385243 84 ntBASIC1.18□□□□□ -2.22
USP17L3A6NCW0 RNU6-1241P-201ENST00000384536 107 ntBASIC1.17□□□□□ -2.22
USP17L3A6NCW0 RNU6-687P-201ENST00000516443 89 ntBASIC1.17□□□□□ -2.22
USP17L3A6NCW0 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
USP17L3A6NCW0 NAMPTP3-201ENST00000569273 224 ntBASIC1.17□□□□□ -2.22
USP17L3A6NCW0 MIR6779-201ENST00000617283 64 ntBASIC1.17□□□□□ -2.22
USP17L3A6NCW0 AC069503.3-201ENST00000618674 145 ntBASIC1.17□□□□□ -2.22
USP17L3A6NCW0 RNY1P8-201ENST00000383970 114 ntBASIC1.15□□□□□ -2.23
USP17L3A6NCW0 RNU6-1039P-201ENST00000383931 107 ntBASIC1.14□□□□□ -2.23
USP17L3A6NCW0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
USP17L3A6NCW0 AC006210.1-201ENST00000424882 111 ntBASIC1.14□□□□□ -2.23
USP17L3A6NCW0 RNU6-634P-201ENST00000459134 106 ntBASIC1.14□□□□□ -2.23
USP17L3A6NCW0 ACA64.5-201ENST00000516207 127 ntBASIC1.13□□□□□ -2.23
USP17L3A6NCW0 MIR8053-201ENST00000613344 75 ntBASIC1.13□□□□□ -2.23
USP17L3A6NCW0 MIR6509-201ENST00000614603 85 ntBASIC1.13□□□□□ -2.23
USP17L3A6NCW0 AC092634.7-201ENST00000621022 103 ntBASIC1.13□□□□□ -2.23
USP17L3A6NCW0 SNORD114-4-201ENST00000363962 75 ntBASIC1.12□□□□□ -2.23
USP17L3A6NCW0 RNU6-110P-201ENST00000384508 104 ntBASIC1.12□□□□□ -2.23
USP17L3A6NCW0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
USP17L3A6NCW0 SNORD45.1-201ENST00000363181 77 ntBASIC1.11□□□□□ -2.23
USP17L3A6NCW0 RNA5SP517-201ENST00000364724 117 ntBASIC1.11□□□□□ -2.23
USP17L3A6NCW0 MIR4698-201ENST00000577795 80 ntBASIC1.11□□□□□ -2.23
USP17L3A6NCW0 SNORD42B-201ENST00000458893 67 ntBASIC1.1□□□□□ -2.23
USP17L3A6NCW0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.1□□□□□ -2.23
USP17L3A6NCW0 SNORD110-201ENST00000408189 75 ntBASIC1.09□□□□□ -2.23
USP17L3A6NCW0 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
USP17L3A6NCW0 AC114801.3-201ENST00000510231 177 ntBASIC1.09□□□□□ -2.23
USP17L3A6NCW0 RNU6-604P-201ENST00000390917 100 ntBASIC1.08□□□□□ -2.24
USP17L3A6NCW0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
USP17L3A6NCW0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
USP17L3A6NCW0 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
USP17L3A6NCW0 RNA5SP325-201ENST00000363756 130 ntBASIC1.06□□□□□ -2.24
USP17L3A6NCW0 PSMC1P5-201ENST00000512850 177 ntBASIC1.06□□□□□ -2.24
USP17L3A6NCW0 SNORA25.18-201ENST00000607153 114 ntBASIC1.06□□□□□ -2.24
USP17L3A6NCW0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.05□□□□□ -2.24
USP17L3A6NCW0 RNU6-895P-201ENST00000384125 103 ntBASIC1.05□□□□□ -2.24
USP17L3A6NCW0 AL590095.2-201ENST00000604136 117 ntBASIC1.05□□□□□ -2.24
USP17L3A6NCW0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.05□□□□□ -2.24
USP17L3A6NCW0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
USP17L3A6NCW0 MIR203A-201ENST00000384836 110 ntBASIC1.04□□□□□ -2.24
USP17L3A6NCW0 AC018659.1-201ENST00000551083 169 ntBASIC1.04□□□□□ -2.24
USP17L3A6NCW0 SNORD118-201ENST00000363593 134 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 Y_RNA.205-201ENST00000364128 113 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 RNU6-260P-201ENST00000384092 107 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 AC139453.2-201ENST00000487255 133 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 RNU6-539P-201ENST00000516665 103 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 RN7SL793P-201ENST00000583259 296 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 MIR3657-201ENST00000584818 117 ntBASIC1.03□□□□□ -2.24
USP17L3A6NCW0 SNORD115-22-201ENST00000364456 82 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 SNORD115-31-201ENST00000365318 82 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 SNORD45A-201ENST00000384512 84 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 RNU6-881P-201ENST00000516813 102 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 MIR4752-201ENST00000579672 72 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 MIR5706-201ENST00000579841 80 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 MIR4714-201ENST00000580728 77 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 MIR4473-201ENST00000583731 91 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 SNORA70.25-201ENST00000612741 95 ntBASIC1.02□□□□□ -2.25
USP17L3A6NCW0 SNORA2.1-201ENST00000363089 137 ntBASIC1.01□□□□□ -2.25
USP17L3A6NCW0 RNU6-649P-201ENST00000384463 107 ntBASIC1.01□□□□□ -2.25
USP17L3A6NCW0 AC069271.1-201ENST00000445577 156 ntBASIC1.01□□□□□ -2.25
USP17L3A6NCW0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
USP17L3A6NCW0 MIR216A-201ENST00000385063 110 ntBASIC1□□□□□ -2.25
USP17L3A6NCW0 SNORD30.1-201ENST00000391309 70 ntBASIC1□□□□□ -2.25
USP17L3A6NCW0 RNU6-540P-201ENST00000384622 101 ntBASIC0.99□□□□□ -2.25
USP17L3A6NCW0 RNU6-663P-201ENST00000391105 106 ntBASIC0.99□□□□□ -2.25
USP17L3A6NCW0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
USP17L3A6NCW0 MIR518A1-201ENST00000385068 85 ntBASIC0.98□□□□□ -2.25
USP17L3A6NCW0 U7.6-201ENST00000610841 64 ntBASIC0.98□□□□□ -2.25
USP17L3A6NCW0 RNU6-990P-201ENST00000364385 104 ntBASIC0.97□□□□□ -2.25
USP17L3A6NCW0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.97□□□□□ -2.25
USP17L3A6NCW0 SNORD113.1-201ENST00000363280 73 ntBASIC0.96□□□□□ -2.26
USP17L3A6NCW0 RNU6-590P-201ENST00000365039 107 ntBASIC0.95□□□□□ -2.26
USP17L3A6NCW0 SNORA2A-201ENST00000383885 135 ntBASIC0.95□□□□□ -2.26
USP17L3A6NCW0 MIR548AE1-201ENST00000583292 70 ntBASIC0.95□□□□□ -2.26
USP17L3A6NCW0 RNU1-29P-201ENST00000606574 126 ntBASIC0.95□□□□□ -2.26
USP17L3A6NCW0 MIR6835-201ENST00000621552 64 ntBASIC0.95□□□□□ -2.26
USP17L3A6NCW0 Y_RNA.250-201ENST00000364542 110 ntBASIC0.94□□□□□ -2.26
USP17L3A6NCW0 MIR652-201ENST00000385278 98 ntBASIC0.94□□□□□ -2.26
USP17L3A6NCW0 RNU6-351P-201ENST00000516097 100 ntBASIC0.94□□□□□ -2.26
USP17L3A6NCW0 RNU6-229P-201ENST00000516614 102 ntBASIC0.94□□□□□ -2.26
USP17L3A6NCW0 MIR6513-201ENST00000621188 64 ntBASIC0.94□□□□□ -2.26
USP17L3A6NCW0 uc_338.10-201ENST00000621872 182 ntBASIC0.94□□□□□ -2.26
USP17L3A6NCW0 RNU6-1216P-201ENST00000362590 107 ntBASIC0.93□□□□□ -2.26
USP17L3A6NCW0 RNA5SP147-201ENST00000516493 109 ntBASIC0.93□□□□□ -2.26
USP17L3A6NCW0 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 HMGN2P22-201ENST00000427588 175 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 MTND4LP1-201ENST00000446263 157 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 RNU6-848P-201ENST00000515948 107 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 RNU6-617P-201ENST00000516147 107 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 RNU6-473P-201ENST00000516164 107 ntBASIC0.92□□□□□ -2.26
USP17L3A6NCW0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms