Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNORA7.1-201ENST00000363750 139 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 RNA5SP117-201ENST00000365294 118 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 RNA5SP299-201ENST00000391203 116 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 RNA5SP147-201ENST00000516493 109 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 RNU6-656P-201ENST00000516785 107 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 AC244669.1-204ENST00000621564 178 ntBASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NUCKS1Q9H1E3 RNU6-940P-201ENST00000363433 104 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 MT-TY-201ENST00000387409 66 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 SNORD12-201ENST00000391002 90 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 RPS29P23-201ENST00000458635 123 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 RNU6-135P-201ENST00000516769 101 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 MIR4639-201ENST00000584938 69 ntBASIC1.65□□□□□ -2.15
NUCKS1Q9H1E3 SNORD28-201ENST00000384706 75 ntBASIC1.64□□□□□ -2.15
NUCKS1Q9H1E3 MIR150-201ENST00000385048 84 ntBASIC1.63□□□□□ -2.15
NUCKS1Q9H1E3 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
NUCKS1Q9H1E3 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
NUCKS1Q9H1E3 AC002429.1-201ENST00000437672 148 ntBASIC1.63□□□□□ -2.15
NUCKS1Q9H1E3 MIR6739-201ENST00000622461 75 ntBASIC1.63□□□□□ -2.15
NUCKS1Q9H1E3 RNA5SP215-201ENST00000363440 122 ntBASIC1.62□□□□□ -2.15
NUCKS1Q9H1E3 RNU1-42P-201ENST00000364033 160 ntBASIC1.62□□□□□ -2.15
NUCKS1Q9H1E3 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
NUCKS1Q9H1E3 RNU6-1089P-201ENST00000516473 104 ntBASIC1.62□□□□□ -2.15
NUCKS1Q9H1E3 MIR4460-201ENST00000577862 86 ntBASIC1.62□□□□□ -2.15
NUCKS1Q9H1E3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
NUCKS1Q9H1E3 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
NUCKS1Q9H1E3 MIR548L-201ENST00000408303 86 ntBASIC1.61□□□□□ -2.15
NUCKS1Q9H1E3 RNU6-469P-201ENST00000516253 101 ntBASIC1.61□□□□□ -2.15
NUCKS1Q9H1E3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.61□□□□□ -2.15
NUCKS1Q9H1E3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 RNU6-726P-201ENST00000364680 107 ntBASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 MIR222-201ENST00000384992 110 ntBASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 MIR7974-201ENST00000615835 79 ntBASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NUCKS1Q9H1E3 RNU6-446P-201ENST00000362827 106 ntBASIC1.59□□□□□ -2.15
NUCKS1Q9H1E3 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
NUCKS1Q9H1E3 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
NUCKS1Q9H1E3 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
NUCKS1Q9H1E3 SNORD18A-201ENST00000363753 72 ntBASIC1.58□□□□□ -2.16
NUCKS1Q9H1E3 RNU1-141P-201ENST00000364623 158 ntBASIC1.58□□□□□ -2.16
NUCKS1Q9H1E3 SNORD89-201ENST00000390981 114 ntBASIC1.58□□□□□ -2.16
NUCKS1Q9H1E3 RNA5SP47-201ENST00000517230 109 ntBASIC1.58□□□□□ -2.16
NUCKS1Q9H1E3 AC018659.1-201ENST00000551083 169 ntBASIC1.58□□□□□ -2.16
NUCKS1Q9H1E3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
NUCKS1Q9H1E3 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.57□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-122P-201ENST00000516818 107 ntBASIC1.57□□□□□ -2.16
NUCKS1Q9H1E3 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
NUCKS1Q9H1E3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-716P-201ENST00000365621 103 ntBASIC1.56□□□□□ -2.16
NUCKS1Q9H1E3 SNORD105-201ENST00000386910 85 ntBASIC1.56□□□□□ -2.16
NUCKS1Q9H1E3 MIR548V-201ENST00000584165 80 ntBASIC1.56□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-92P-201ENST00000605893 104 ntBASIC1.56□□□□□ -2.16
NUCKS1Q9H1E3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
NUCKS1Q9H1E3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.55□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-302P-201ENST00000365249 107 ntBASIC1.55□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-269P-201ENST00000391077 97 ntBASIC1.55□□□□□ -2.16
NUCKS1Q9H1E3 SNORA75.1-201ENST00000391130 148 ntBASIC1.55□□□□□ -2.16
NUCKS1Q9H1E3 AL157398.1-201ENST00000452981 186 ntBASIC1.55□□□□□ -2.16
NUCKS1Q9H1E3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.55□□□□□ -2.16
NUCKS1Q9H1E3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NUCKS1Q9H1E3 SNORD114-4-201ENST00000363962 75 ntBASIC1.54□□□□□ -2.16
NUCKS1Q9H1E3 SNORA25-201ENST00000384384 134 ntBASIC1.54□□□□□ -2.16
NUCKS1Q9H1E3 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
NUCKS1Q9H1E3 snoU13.13-201ENST00000458842 104 ntBASIC1.54□□□□□ -2.16
NUCKS1Q9H1E3 MIR3938-201ENST00000582157 103 ntBASIC1.54□□□□□ -2.16
NUCKS1Q9H1E3 RNU6-1162P-201ENST00000384443 104 ntBASIC1.53□□□□□ -2.16
NUCKS1Q9H1E3 RNU1-92P-201ENST00000517017 135 ntBASIC1.53□□□□□ -2.16
NUCKS1Q9H1E3 MIR3678-201ENST00000578455 94 ntBASIC1.53□□□□□ -2.16
NUCKS1Q9H1E3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
NUCKS1Q9H1E3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
NUCKS1Q9H1E3 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 MIR26B-201ENST00000362251 77 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 SNORD60.1-201ENST00000362451 73 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 RNA5SP327-201ENST00000362494 101 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 SNORA8.2-201ENST00000384372 139 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 MIR521-2-201ENST00000384818 87 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 RNA5SP484-201ENST00000458857 111 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 RNU7-95P-201ENST00000459222 64 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 MIR7978-201ENST00000636158 59 ntBASIC1.52□□□□□ -2.17
NUCKS1Q9H1E3 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
NUCKS1Q9H1E3 AP1B1P2-201ENST00000416196 106 ntBASIC1.51□□□□□ -2.17
NUCKS1Q9H1E3 U7.7-201ENST00000459276 60 ntBASIC1.51□□□□□ -2.17
NUCKS1Q9H1E3 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
NUCKS1Q9H1E3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.51□□□□□ -2.17
NUCKS1Q9H1E3 SNORD113-4-201ENST00000364802 75 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 MIR548C-201ENST00000384815 97 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 MIR630-201ENST00000384957 97 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 FABP5P4-201ENST00000437203 171 ntBASIC1.5□□□□□ -2.17
NUCKS1Q9H1E3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 6.6 ms