Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 Y_RNA.75-201ENST00000362927 97 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.88-201ENST00000363029 99 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 RNU6-415P-201ENST00000516252 97 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 RNU6-1089P-201ENST00000516473 104 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.699-201ENST00000516803 93 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 AL442128.1-201ENST00000615151 90 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 MIR4272-201ENST00000635924 64 ntBASIC-4.3□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.541-201ENST00000384640 113 ntBASIC-4.31□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.582-201ENST00000391023 95 ntBASIC-4.31□□□□□ -3.1
LINC00643Q86TS7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-4.31□□□□□ -3.1
LINC00643Q86TS7 RNU5F-1-201ENST00000362507 117 ntBASIC-4.32□□□□□ -3.1
LINC00643Q86TS7 RNU6-598P-201ENST00000364017 105 ntBASIC-4.32□□□□□ -3.1
LINC00643Q86TS7 MIR548I1-201ENST00000408810 149 ntBASIC-4.32□□□□□ -3.1
LINC00643Q86TS7 AL118496.2-201ENST00000448300 230 ntBASIC-4.32□□□□□ -3.1
LINC00643Q86TS7 AL050303.3-201ENST00000613704 284 ntBASIC-4.32□□□□□ -3.1
LINC00643Q86TS7 AC024614.3-201ENST00000637860 256 ntBASIC-4.32□□□□□ -3.1
LINC00643Q86TS7 RNU6-151P-201ENST00000364158 107 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 RNU6-326P-201ENST00000365480 107 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.403-201ENST00000383977 101 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 MIR548A3-201ENST00000385297 97 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 RNU6-130P-201ENST00000411112 103 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 AL137067.1-201ENST00000615933 120 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 AC021753.1-201ENST00000635724 168 ntBASIC-4.33□□□□□ -3.1
LINC00643Q86TS7 RNU6-363P-201ENST00000362895 105 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.109-201ENST00000363215 102 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.313-201ENST00000365095 103 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 Y_RNA.443-201ENST00000384135 111 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 RNU6-1046P-201ENST00000516538 107 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 DLEU2_3.2-201ENST00000612883 73 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 SNX3P1Y-201ENST00000615757 176 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 MIR376A1-201ENST00000616574 68 ntBASIC-4.34□□□□□ -3.1
LINC00643Q86TS7 RNU6-247P-201ENST00000362636 107 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.41-201ENST00000362646 102 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 RNU6-103P-201ENST00000363686 107 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 RNU6-290P-201ENST00000365212 101 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.339-201ENST00000365325 102 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.397-201ENST00000383950 98 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.421-201ENST00000384052 101 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.519-201ENST00000384553 102 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 MT-TI-201ENST00000387365 69 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 SNORA20.3-201ENST00000516880 132 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 RNU6-1271P-201ENST00000517049 105 ntBASIC-4.35□□□□□ -3.11
LINC00643Q86TS7 RNU6-890P-201ENST00000384121 107 ntBASIC-4.36□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.646-201ENST00000410980 101 ntBASIC-4.36□□□□□ -3.11
LINC00643Q86TS7 AL513043.2-201ENST00000573941 143 ntBASIC-4.36□□□□□ -3.11
LINC00643Q86TS7 U6.81-201ENST00000612550 106 ntBASIC-4.36□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.74-201ENST00000362911 99 ntBASIC-4.37□□□□□ -3.11
LINC00643Q86TS7 MT-TW-201ENST00000387382 68 ntBASIC-4.37□□□□□ -3.11
LINC00643Q86TS7 RNA5SP292-201ENST00000390974 118 ntBASIC-4.37□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.651-201ENST00000459380 103 ntBASIC-4.37□□□□□ -3.11
LINC00643Q86TS7 MIR548Z-201ENST00000584743 97 ntBASIC-4.37□□□□□ -3.11
LINC00643Q86TS7 SNORD81.2-201ENST00000365153 76 ntBASIC-4.38□□□□□ -3.11
LINC00643Q86TS7 RNU6-409P-201ENST00000384114 104 ntBASIC-4.38□□□□□ -3.11
LINC00643Q86TS7 RNU6-780P-201ENST00000391030 104 ntBASIC-4.38□□□□□ -3.11
LINC00643Q86TS7 RNU6-656P-201ENST00000516785 107 ntBASIC-4.38□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.721-201ENST00000517207 102 ntBASIC-4.38□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.163-201ENST00000363702 113 ntBASIC-4.39□□□□□ -3.11
LINC00643Q86TS7 RNU6-141P-201ENST00000410499 105 ntBASIC-4.39□□□□□ -3.11
LINC00643Q86TS7 RNU6-1191P-201ENST00000516799 107 ntBASIC-4.39□□□□□ -3.11
LINC00643Q86TS7 U2.18-201ENST00000622185 84 ntBASIC-4.39□□□□□ -3.11
LINC00643Q86TS7 SNORD18C-201ENST00000362704 69 ntBASIC-4.4□□□□□ -3.11
LINC00643Q86TS7 RNU6-238P-201ENST00000363313 106 ntBASIC-4.4□□□□□ -3.11
LINC00643Q86TS7 RNU6-1289P-201ENST00000384431 106 ntBASIC-4.4□□□□□ -3.11
LINC00643Q86TS7 MIR548C-201ENST00000384815 97 ntBASIC-4.4□□□□□ -3.11
LINC00643Q86TS7 SNORA18.5-201ENST00000516616 101 ntBASIC-4.4□□□□□ -3.11
LINC00643Q86TS7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-4.4□□□□□ -3.11
LINC00643Q86TS7 Y_RNA.155-201ENST00000363632 101 ntBASIC-4.41□□□□□ -3.12
LINC00643Q86TS7 Y_RNA.282-201ENST00000364793 102 ntBASIC-4.41□□□□□ -3.12
LINC00643Q86TS7 RNU6-643P-201ENST00000384018 107 ntBASIC-4.41□□□□□ -3.12
LINC00643Q86TS7 AC025253.1-201ENST00000613623 543 ntBASIC-4.41□□□□□ -3.12
LINC00643Q86TS7 RNU6-310P-201ENST00000384655 107 ntBASIC-4.42□□□□□ -3.12
LINC00643Q86TS7 Y_RNA.581-201ENST00000391017 97 ntBASIC-4.42□□□□□ -3.12
LINC00643Q86TS7 SNORD4B-201ENST00000459083 72 ntBASIC-4.42□□□□□ -3.12
LINC00643Q86TS7 RNU6-752P-201ENST00000516376 102 ntBASIC-4.42□□□□□ -3.12
LINC00643Q86TS7 MIR4744-201ENST00000581563 82 ntBASIC-4.42□□□□□ -3.12
LINC00643Q86TS7 AC080013.6-201ENST00000606185 215 ntBASIC-4.42□□□□□ -3.12
LINC00643Q86TS7 RNU6-1283P-201ENST00000365314 105 ntBASIC-4.43□□□□□ -3.12
LINC00643Q86TS7 AC005520.4-201ENST00000604337 90 ntBASIC-4.43□□□□□ -3.12
LINC00643Q86TS7 AC124864.2-201ENST00000624736 186 ntBASIC-4.43□□□□□ -3.12
LINC00643Q86TS7 MTND1P29-201ENST00000448112 647 ntBASIC-4.44□□□□□ -3.12
LINC00643Q86TS7 Y_RNA.690-201ENST00000516603 95 ntBASIC-4.44□□□□□ -3.12
LINC00643Q86TS7 AC015540.1-201ENST00000615828 501 ntBASIC-4.44□□□□□ -3.12
LINC00643Q86TS7 MIR548AA1-201ENST00000384971 97 ntBASIC-4.45□□□□□ -3.12
LINC00643Q86TS7 SNORD115-46-201ENST00000390982 71 ntBASIC-4.45□□□□□ -3.12
LINC00643Q86TS7 RNU6-1009P-201ENST00000390996 107 ntBASIC-4.45□□□□□ -3.12
LINC00643Q86TS7 RNY4P7-201ENST00000364600 96 ntBASIC-4.46□□□□□ -3.12
LINC00643Q86TS7 RNU6-818P-201ENST00000364837 108 ntBASIC-4.46□□□□□ -3.12
LINC00643Q86TS7 Y_RNA.291-201ENST00000364886 113 ntBASIC-4.46□□□□□ -3.12
LINC00643Q86TS7 RNU5A-2P-201ENST00000384337 116 ntBASIC-4.46□□□□□ -3.12
LINC00643Q86TS7 SNORA27.2-201ENST00000363365 126 ntBASIC-4.47□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.349-201ENST00000365406 102 ntBASIC-4.47□□□□□ -3.13
LINC00643Q86TS7 RNU6-1119P-201ENST00000384349 108 ntBASIC-4.47□□□□□ -3.13
LINC00643Q86TS7 SNORA40.14-201ENST00000516543 86 ntBASIC-4.47□□□□□ -3.13
LINC00643Q86TS7 RNU6-508P-201ENST00000363231 103 ntBASIC-4.48□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.445-201ENST00000384168 102 ntBASIC-4.48□□□□□ -3.13
LINC00643Q86TS7 MIR559-201ENST00000385188 96 ntBASIC-4.48□□□□□ -3.13
LINC00643Q86TS7 RNU6-578P-201ENST00000390980 103 ntBASIC-4.48□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.507-201ENST00000384500 99 ntBASIC-4.49□□□□□ -3.13
LINC00643Q86TS7 RNU6-699P-201ENST00000517081 110 ntBASIC-4.49□□□□□ -3.13
LINC00643Q86TS7 Y_RNA.31-201ENST00000362574 102 ntBASIC-4.5□□□□□ -3.13
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms