Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SNORA80D-201ENST00000384488 135 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 MIR617-201ENST00000385030 97 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 AC079150.2-201ENST00000443733 78 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 MTND4LP1-201ENST00000446263 157 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 RNU7-90P-201ENST00000459216 62 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 RNU7-104P-201ENST00000459398 79 ntBASIC1.58□□□□□ -2.16
RNF43Q68DV7 MIR1-1-201ENST00000362147 71 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 RNU6-54P-201ENST00000365563 107 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 RNU6-614P-201ENST00000384369 107 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 MIR520F-201ENST00000384824 87 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 MIR216B-201ENST00000390186 82 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 RNU6-141P-201ENST00000410499 105 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 U6.59-201ENST00000615686 107 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 MIR548O2-201ENST00000616090 70 ntBASIC1.57□□□□□ -2.16
RNF43Q68DV7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.56□□□□□ -2.16
RNF43Q68DV7 SNORD114-22-201ENST00000365423 72 ntBASIC1.56□□□□□ -2.16
RNF43Q68DV7 MIR519E-201ENST00000385075 84 ntBASIC1.56□□□□□ -2.16
RNF43Q68DV7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.56□□□□□ -2.16
RNF43Q68DV7 AC067940.1-201ENST00000458411 300 ntBASIC1.56□□□□□ -2.16
RNF43Q68DV7 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
RNF43Q68DV7 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
RNF43Q68DV7 AC073869.9-201ENST00000641610 120 ntBASIC1.55□□□□□ -2.16
RNF43Q68DV7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RNF43Q68DV7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.54□□□□□ -2.16
RNF43Q68DV7 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
RNF43Q68DV7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.54□□□□□ -2.16
RNF43Q68DV7 MIR3657-201ENST00000584818 117 ntBASIC1.54□□□□□ -2.16
RNF43Q68DV7 AL136317.1-201ENST00000612653 226 ntBASIC1.54□□□□□ -2.16
RNF43Q68DV7 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
RNF43Q68DV7 AC092634.7-201ENST00000621022 103 ntBASIC1.54□□□□□ -2.16
RNF43Q68DV7 Y_RNA.375-201ENST00000365625 101 ntBASIC1.53□□□□□ -2.16
RNF43Q68DV7 SNORD42B-201ENST00000458893 67 ntBASIC1.53□□□□□ -2.16
RNF43Q68DV7 RNU6-542P-201ENST00000516405 103 ntBASIC1.53□□□□□ -2.16
RNF43Q68DV7 MIR6078-201ENST00000611069 100 ntBASIC1.53□□□□□ -2.16
RNF43Q68DV7 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
RNF43Q68DV7 AC067863.3-201ENST00000624172 122 ntBASIC1.53□□□□□ -2.16
RNF43Q68DV7 RNU6-645P-201ENST00000364649 106 ntBASIC1.52□□□□□ -2.17
RNF43Q68DV7 RNU6-260P-201ENST00000384092 107 ntBASIC1.52□□□□□ -2.17
RNF43Q68DV7 RNU6V-201ENST00000384105 107 ntBASIC1.52□□□□□ -2.17
RNF43Q68DV7 MIR644A-201ENST00000385262 94 ntBASIC1.51□□□□□ -2.17
RNF43Q68DV7 MIR1827-201ENST00000408549 66 ntBASIC1.51□□□□□ -2.17
RNF43Q68DV7 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
RNF43Q68DV7 SNORD114-26-201ENST00000363543 72 ntBASIC1.5□□□□□ -2.17
RNF43Q68DV7 RNU6-829P-201ENST00000363700 112 ntBASIC1.5□□□□□ -2.17
RNF43Q68DV7 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
RNF43Q68DV7 MIR6515-201ENST00000619843 57 ntBASIC1.5□□□□□ -2.17
RNF43Q68DV7 RNA5SP192-201ENST00000364404 120 ntBASIC1.49□□□□□ -2.17
RNF43Q68DV7 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
RNF43Q68DV7 MIR6779-201ENST00000617283 64 ntBASIC1.49□□□□□ -2.17
RNF43Q68DV7 RNU6-1079P-201ENST00000362861 110 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 RNA5SP325-201ENST00000363756 130 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 SNORA25.5-201ENST00000363782 126 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 AC002350.1-201ENST00000490759 375 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 RNA5SP147-201ENST00000516493 109 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
RNF43Q68DV7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.48□□□□□ -2.17
RNF43Q68DV7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RNF43Q68DV7 RNU6-990P-201ENST00000364385 104 ntBASIC1.47□□□□□ -2.17
RNF43Q68DV7 RNA5SP117-201ENST00000365294 118 ntBASIC1.47□□□□□ -2.17
RNF43Q68DV7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RNF43Q68DV7 SNORA40.17-201ENST00000517256 115 ntBASIC1.47□□□□□ -2.17
RNF43Q68DV7 MIR466-201ENST00000580653 84 ntBASIC1.47□□□□□ -2.17
RNF43Q68DV7 AC022709.1-201ENST00000615967 87 ntBASIC1.47□□□□□ -2.17
RNF43Q68DV7 AC244669.1-204ENST00000621564 178 ntBASIC1.47□□□□□ -2.17
RNF43Q68DV7 Y_RNA.236-201ENST00000364427 111 ntBASIC1.46□□□□□ -2.18
RNF43Q68DV7 RNA5SP299-201ENST00000391203 116 ntBASIC1.46□□□□□ -2.18
RNF43Q68DV7 SCARNA21.1-201ENST00000515996 128 ntBASIC1.46□□□□□ -2.18
RNF43Q68DV7 SNORA2.1-201ENST00000363089 137 ntBASIC1.45□□□□□ -2.18
RNF43Q68DV7 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
RNF43Q68DV7 RNU6-656P-201ENST00000516785 107 ntBASIC1.45□□□□□ -2.18
RNF43Q68DV7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RNF43Q68DV7 SNORD28-201ENST00000384706 75 ntBASIC1.44□□□□□ -2.18
RNF43Q68DV7 MT-TY-201ENST00000387409 66 ntBASIC1.44□□□□□ -2.18
RNF43Q68DV7 SNORD41.1-201ENST00000391000 69 ntBASIC1.44□□□□□ -2.18
RNF43Q68DV7 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
RNF43Q68DV7 RNU7-74P-201ENST00000459104 62 ntBASIC1.44□□□□□ -2.18
RNF43Q68DV7 MIR96-201ENST00000362288 78 ntBASIC1.43□□□□□ -2.18
RNF43Q68DV7 RNU6-940P-201ENST00000363433 104 ntBASIC1.43□□□□□ -2.18
RNF43Q68DV7 MIR548L-201ENST00000408303 86 ntBASIC1.43□□□□□ -2.18
RNF43Q68DV7 MIR4460-201ENST00000577862 86 ntBASIC1.43□□□□□ -2.18
RNF43Q68DV7 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
RNF43Q68DV7 MIR4639-201ENST00000584938 69 ntBASIC1.43□□□□□ -2.18
RNF43Q68DV7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RNF43Q68DV7 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
RNF43Q68DV7 RNU6-135P-201ENST00000516769 101 ntBASIC1.42□□□□□ -2.18
RNF43Q68DV7 MIR222-201ENST00000384992 110 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 SNORD89-201ENST00000390981 114 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 RNU6-469P-201ENST00000516253 101 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 RNU6-1089P-201ENST00000516473 104 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 MIR6739-201ENST00000622461 75 ntBASIC1.41□□□□□ -2.18
RNF43Q68DV7 RNA5SP215-201ENST00000363440 122 ntBASIC1.4□□□□□ -2.19
RNF43Q68DV7 RNU6-726P-201ENST00000364680 107 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 313.6 ms