Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SNORD45B-201ENST00000364617 72 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 RNU7-107P-201ENST00000459121 61 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 RNU6-971P-201ENST00000516920 106 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 MIR4536-1-201ENST00000583537 88 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 RNU6-86P-201ENST00000606534 107 ntBASIC-0.6□□□□□ -2.51
HOXD13P35453 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 U3.27-201ENST00000391237 200 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 AL445193.1-201ENST00000441183 141 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.61□□□□□ -2.51
HOXD13P35453 RNU6-346P-201ENST00000516288 111 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 MIR548O2-201ENST00000616090 70 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 AL035470.1-201ENST00000622571 220 ntBASIC-0.61□□□□□ -2.51
HOXD13P35453 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 RNU6-35P-201ENST00000384530 107 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 MIR3914-2-201ENST00000637339 95 ntBASIC-0.62□□□□□ -2.51
HOXD13P35453 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 SNORD114-4-201ENST00000363962 75 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 MIR548A3-201ENST00000385297 97 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 RNU6-907P-201ENST00000390924 102 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 RNA5SP451-201ENST00000410588 110 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 RNU6-762P-201ENST00000517107 102 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 AC025521.1-201ENST00000621624 286 ntBASIC-0.63□□□□□ -2.51
HOXD13P35453 MIR451A-201ENST00000385059 72 ntBASIC-0.64□□□□□ -2.51
HOXD13P35453 SNORA3B-201ENST00000391305 131 ntBASIC-0.64□□□□□ -2.51
HOXD13P35453 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.64□□□□□ -2.51
HOXD13P35453 SNORD2-201ENST00000459163 69 ntBASIC-0.64□□□□□ -2.51
HOXD13P35453 MIR5009-201ENST00000578736 100 ntBASIC-0.64□□□□□ -2.51
HOXD13P35453 AC093726.3-201ENST00000637588 150 ntBASIC-0.64□□□□□ -2.51
HOXD13P35453 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.65□□□□□ -2.51
HOXD13P35453 SNORD50.2-201ENST00000365465 70 ntBASIC-0.66□□□□□ -2.52
HOXD13P35453 MIR9-2-201ENST00000384838 87 ntBASIC-0.66□□□□□ -2.52
HOXD13P35453 MIR604-201ENST00000384880 94 ntBASIC-0.66□□□□□ -2.52
HOXD13P35453 MIR204-201ENST00000385200 110 ntBASIC-0.66□□□□□ -2.52
HOXD13P35453 RNA5SP395-201ENST00000516567 118 ntBASIC-0.66□□□□□ -2.52
HOXD13P35453 SNORD115-25-201ENST00000362619 82 ntBASIC-0.67□□□□□ -2.52
HOXD13P35453 RNU4-36P-201ENST00000364294 144 ntBASIC-0.67□□□□□ -2.52
HOXD13P35453 RNU6-900P-201ENST00000384498 102 ntBASIC-0.67□□□□□ -2.52
HOXD13P35453 MIR548A1-201ENST00000385041 97 ntBASIC-0.67□□□□□ -2.52
HOXD13P35453 Z95118.1-201ENST00000421372 247 ntBASIC-0.67□□□□□ -2.52
HOXD13P35453 RNU6-758P-201ENST00000516292 89 ntBASIC-0.67□□□□□ -2.52
HOXD13P35453 RNU6-54P-201ENST00000365563 107 ntBASIC-0.68□□□□□ -2.52
HOXD13P35453 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.68□□□□□ -2.52
HOXD13P35453 AL513043.2-201ENST00000573941 143 ntBASIC-0.68□□□□□ -2.52
HOXD13P35453 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.69□□□□□ -2.52
HOXD13P35453 RNU6-813P-201ENST00000384691 107 ntBASIC-0.69□□□□□ -2.52
HOXD13P35453 MIR548U-201ENST00000390728 81 ntBASIC-0.69□□□□□ -2.52
HOXD13P35453 RNU6-75P-201ENST00000515944 104 ntBASIC-0.69□□□□□ -2.52
HOXD13P35453 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 RNU6-644P-201ENST00000391155 98 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 MIR1265-201ENST00000408444 86 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 snoU13.13-201ENST00000458842 104 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 FGF7P7-201ENST00000514120 227 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 SNORD33.1-201ENST00000516213 88 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 RNU6-412P-201ENST00000516434 106 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 MIR3681-201ENST00000580089 72 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 MIR3671-201ENST00000580455 88 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.7□□□□□ -2.52
HOXD13P35453 SNORD95.1-201ENST00000364099 68 ntBASIC-0.71□□□□□ -2.52
HOXD13P35453 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.71□□□□□ -2.52
HOXD13P35453 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.71□□□□□ -2.52
HOXD13P35453 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.71□□□□□ -2.52
HOXD13P35453 RNU6-659P-201ENST00000516454 104 ntBASIC-0.71□□□□□ -2.52
HOXD13P35453 RNU6-719P-201ENST00000516671 104 ntBASIC-0.71□□□□□ -2.52
HOXD13P35453 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.72□□□□□ -2.52
HOXD13P35453 SNORD56B-201ENST00000384713 71 ntBASIC-0.72□□□□□ -2.52
HOXD13P35453 RNA5SP25-201ENST00000410815 110 ntBASIC-0.72□□□□□ -2.52
HOXD13P35453 AC108676.2-201ENST00000605225 163 ntBASIC-0.72□□□□□ -2.52
HOXD13P35453 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.73□□□□□ -2.53
HOXD13P35453 RNU6-209P-201ENST00000384118 107 ntBASIC-0.73□□□□□ -2.53
HOXD13P35453 SNORA49-201ENST00000386157 136 ntBASIC-0.73□□□□□ -2.53
HOXD13P35453 SNORA40.17-201ENST00000517256 115 ntBASIC-0.73□□□□□ -2.53
HOXD13P35453 MIR3668-201ENST00000582138 75 ntBASIC-0.73□□□□□ -2.53
HOXD13P35453 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.74□□□□□ -2.53
HOXD13P35453 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
HOXD13P35453 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.74□□□□□ -2.53
HOXD13P35453 MIR3613-201ENST00000579844 87 ntBASIC-0.74□□□□□ -2.53
HOXD13P35453 MIR582-201ENST00000365731 98 ntBASIC-0.75□□□□□ -2.53
HOXD13P35453 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
HOXD13P35453 MT-TQ-201ENST00000387372 72 ntBASIC-0.75□□□□□ -2.53
HOXD13P35453 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
HOXD13P35453 RNU7-55P-201ENST00000459426 62 ntBASIC-0.75□□□□□ -2.53
HOXD13P35453 AC021146.6-201ENST00000514659 117 ntBASIC-0.75□□□□□ -2.53
HOXD13P35453 AC103810.7-201ENST00000607821 91 ntBASIC-0.75□□□□□ -2.53
HOXD13P35453 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.76□□□□□ -2.53
HOXD13P35453 RNU6-880P-201ENST00000384526 107 ntBASIC-0.76□□□□□ -2.53
HOXD13P35453 MIR224-201ENST00000384889 81 ntBASIC-0.76□□□□□ -2.53
HOXD13P35453 MIR548E-201ENST00000408287 88 ntBASIC-0.76□□□□□ -2.53
HOXD13P35453 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.76□□□□□ -2.53
HOXD13P35453 SNORD38.3-201ENST00000516599 73 ntBASIC-0.76□□□□□ -2.53
HOXD13P35453 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms