Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MIR606-201ENST00000384851 96 ntBASIC-1.09□□□□□ -2.58
USF1P22415 MIR548D2-201ENST00000384955 97 ntBASIC-1.09□□□□□ -2.58
USF1P22415 RNA5SP136-201ENST00000410906 107 ntBASIC-1.09□□□□□ -2.58
USF1P22415 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.09□□□□□ -2.58
USF1P22415 RNU6-111P-201ENST00000517179 105 ntBASIC-1.09□□□□□ -2.58
USF1P22415 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.09□□□□□ -2.58
USF1P22415 RNU6-647P-201ENST00000364243 107 ntBASIC-1.1□□□□□ -2.59
USF1P22415 RNA5SP192-201ENST00000364404 120 ntBASIC-1.1□□□□□ -2.59
USF1P22415 SNORA20.1-201ENST00000364790 130 ntBASIC-1.1□□□□□ -2.59
USF1P22415 SNORA63.6-201ENST00000364921 119 ntBASIC-1.1□□□□□ -2.59
USF1P22415 snoR1.1-201ENST00000628177 80 ntBASIC-1.1□□□□□ -2.59
USF1P22415 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.11□□□□□ -2.59
USF1P22415 MIR601-201ENST00000385256 79 ntBASIC-1.11□□□□□ -2.59
USF1P22415 MIR1302-3-201ENST00000408128 138 ntBASIC-1.11□□□□□ -2.59
USF1P22415 RNA5SP461-201ENST00000516451 104 ntBASIC-1.11□□□□□ -2.59
USF1P22415 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.11□□□□□ -2.59
USF1P22415 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.12□□□□□ -2.59
USF1P22415 RNU6-409P-201ENST00000384114 104 ntBASIC-1.12□□□□□ -2.59
USF1P22415 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.12□□□□□ -2.59
USF1P22415 AC022559.1-201ENST00000520905 205 ntBASIC-1.12□□□□□ -2.59
USF1P22415 AC072026.1-201ENST00000605023 201 ntBASIC-1.12□□□□□ -2.59
USF1P22415 AC062037.2-201ENST00000610137 73 ntBASIC-1.12□□□□□ -2.59
USF1P22415 AL442128.1-201ENST00000615151 90 ntBASIC-1.12□□□□□ -2.59
USF1P22415 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.13□□□□□ -2.59
USF1P22415 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.13□□□□□ -2.59
USF1P22415 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.13□□□□□ -2.59
USF1P22415 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.13□□□□□ -2.59
USF1P22415 RNU7-197P-201ENST00000458836 62 ntBASIC-1.13□□□□□ -2.59
USF1P22415 RNU7-134P-201ENST00000458997 64 ntBASIC-1.13□□□□□ -2.59
USF1P22415 SNORD18.2-201ENST00000459604 70 ntBASIC-1.13□□□□□ -2.59
USF1P22415 RNU6-719P-201ENST00000516671 104 ntBASIC-1.13□□□□□ -2.59
USF1P22415 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.13□□□□□ -2.59
USF1P22415 MIR198-201ENST00000637333 62 ntBASIC-1.13□□□□□ -2.59
USF1P22415 RNU6-495P-201ENST00000362995 107 ntBASIC-1.14□□□□□ -2.59
USF1P22415 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.14□□□□□ -2.59
USF1P22415 RNU6-915P-201ENST00000364943 103 ntBASIC-1.14□□□□□ -2.59
USF1P22415 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.14□□□□□ -2.59
USF1P22415 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.14□□□□□ -2.59
USF1P22415 MIR1263-201ENST00000408324 86 ntBASIC-1.14□□□□□ -2.59
USF1P22415 MTCYBP9-201ENST00000431021 303 ntBASIC-1.14□□□□□ -2.59
USF1P22415 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.14□□□□□ -2.59
USF1P22415 AC025521.1-201ENST00000621624 286 ntBASIC-1.14□□□□□ -2.59
USF1P22415 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.15□□□□□ -2.59
USF1P22415 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.15□□□□□ -2.59
USF1P22415 MIR8485-201ENST00000401372 91 ntBASIC-1.15□□□□□ -2.59
USF1P22415 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.15□□□□□ -2.59
USF1P22415 RNU7-85P-201ENST00000458851 63 ntBASIC-1.15□□□□□ -2.59
USF1P22415 FGF7P7-201ENST00000514120 227 ntBASIC-1.15□□□□□ -2.59
USF1P22415 MIR3165-201ENST00000579874 75 ntBASIC-1.15□□□□□ -2.59
USF1P22415 MIR4464-201ENST00000580818 92 ntBASIC-1.15□□□□□ -2.59
USF1P22415 YWHAEP3-201ENST00000582767 121 ntBASIC-1.15□□□□□ -2.59
USF1P22415 RNU6-990P-201ENST00000364385 104 ntBASIC-1.16□□□□□ -2.6
USF1P22415 RNU4-11P-201ENST00000365287 132 ntBASIC-1.16□□□□□ -2.6
USF1P22415 SNORD50.2-201ENST00000365465 70 ntBASIC-1.16□□□□□ -2.6
USF1P22415 SNORA62.4-201ENST00000365504 151 ntBASIC-1.16□□□□□ -2.6
USF1P22415 SNORA24B-201ENST00000384176 131 ntBASIC-1.16□□□□□ -2.6
USF1P22415 MIR124-2-201ENST00000385081 109 ntBASIC-1.16□□□□□ -2.6
USF1P22415 RNU6-706P-201ENST00000517229 104 ntBASIC-1.16□□□□□ -2.6
USF1P22415 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.17□□□□□ -2.6
USF1P22415 SNORD114-17-201ENST00000364699 75 ntBASIC-1.17□□□□□ -2.6
USF1P22415 RNU6-132P-201ENST00000383863 107 ntBASIC-1.17□□□□□ -2.6
USF1P22415 RNU6-738P-201ENST00000384531 106 ntBASIC-1.17□□□□□ -2.6
USF1P22415 snoU83B.1-201ENST00000517136 88 ntBASIC-1.17□□□□□ -2.6
USF1P22415 MIR4723-201ENST00000585070 81 ntBASIC-1.17□□□□□ -2.6
USF1P22415 SNORA63.2-201ENST00000362603 126 ntBASIC-1.18□□□□□ -2.6
USF1P22415 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.18□□□□□ -2.6
USF1P22415 RNU6-460P-201ENST00000391158 108 ntBASIC-1.18□□□□□ -2.6
USF1P22415 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.18□□□□□ -2.6
USF1P22415 RNU6-65P-201ENST00000516332 98 ntBASIC-1.18□□□□□ -2.6
USF1P22415 MIR4536-1-201ENST00000583537 88 ntBASIC-1.18□□□□□ -2.6
USF1P22415 MIR3140-201ENST00000583685 90 ntBASIC-1.18□□□□□ -2.6
USF1P22415 AC141273.2-201ENST00000618989 130 ntBASIC-1.18□□□□□ -2.6
USF1P22415 AC090617.8-201ENST00000623339 167 ntBASIC-1.18□□□□□ -2.6
USF1P22415 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.19□□□□□ -2.6
USF1P22415 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.19□□□□□ -2.6
USF1P22415 AC026421.1-201ENST00000519101 163 ntBASIC-1.19□□□□□ -2.6
USF1P22415 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.19□□□□□ -2.6
USF1P22415 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.19□□□□□ -2.6
USF1P22415 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.19□□□□□ -2.6
USF1P22415 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.19□□□□□ -2.6
USF1P22415 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.19□□□□□ -2.6
USF1P22415 RNU6-208P-201ENST00000362431 107 ntBASIC-1.2□□□□□ -2.6
USF1P22415 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.2□□□□□ -2.6
USF1P22415 SNORA63-201ENST00000363450 132 ntBASIC-1.2□□□□□ -2.6
USF1P22415 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.2□□□□□ -2.6
USF1P22415 RNY4P6-201ENST00000363667 96 ntBASIC-1.2□□□□□ -2.6
USF1P22415 MIR568-201ENST00000385036 95 ntBASIC-1.2□□□□□ -2.6
USF1P22415 RNU6-816P-201ENST00000390914 107 ntBASIC-1.2□□□□□ -2.6
USF1P22415 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.2□□□□□ -2.6
USF1P22415 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.2□□□□□ -2.6
USF1P22415 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.2□□□□□ -2.6
USF1P22415 AC021146.9-201ENST00000512503 156 ntBASIC-1.2□□□□□ -2.6
USF1P22415 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.2□□□□□ -2.6
USF1P22415 SNORA81.3-201ENST00000517283 198 ntBASIC-1.2□□□□□ -2.6
USF1P22415 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.2□□□□□ -2.6
USF1P22415 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.21□□□□□ -2.6
USF1P22415 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
USF1P22415 RNU7-24P-201ENST00000458867 62 ntBASIC-1.21□□□□□ -2.6
USF1P22415 RNU6-479P-201ENST00000516348 105 ntBASIC-1.21□□□□□ -2.6
USF1P22415 RNU6-781P-201ENST00000516377 101 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms