Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SNORD18A-201ENST00000363753 72 ntBASIC1.3□□□□□ -2.2
LIG1P18858 SNORD114-24-201ENST00000365029 72 ntBASIC1.3□□□□□ -2.2
LIG1P18858 MIR519E-201ENST00000385075 84 ntBASIC1.3□□□□□ -2.2
LIG1P18858 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
LIG1P18858 RNU7-74P-201ENST00000459104 62 ntBASIC1.3□□□□□ -2.2
LIG1P18858 MIR3675-201ENST00000583661 73 ntBASIC1.3□□□□□ -2.2
LIG1P18858 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LIG1P18858 RNA5SP47-201ENST00000517230 109 ntBASIC1.29□□□□□ -2.2
LIG1P18858 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
LIG1P18858 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
LIG1P18858 RNU6-1241P-201ENST00000384536 107 ntBASIC1.28□□□□□ -2.2
LIG1P18858 RNU7-24P-201ENST00000458867 62 ntBASIC1.28□□□□□ -2.2
LIG1P18858 RNA5SP255-201ENST00000516370 107 ntBASIC1.28□□□□□ -2.2
LIG1P18858 RNU6-752P-201ENST00000516376 102 ntBASIC1.28□□□□□ -2.2
LIG1P18858 MIR3678-201ENST00000578455 94 ntBASIC1.28□□□□□ -2.2
LIG1P18858 MIR3612-201ENST00000579753 87 ntBASIC1.28□□□□□ -2.2
LIG1P18858 MIR548O2-201ENST00000616090 70 ntBASIC1.28□□□□□ -2.2
LIG1P18858 MIR7111-201ENST00000619751 72 ntBASIC1.28□□□□□ -2.2
LIG1P18858 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
LIG1P18858 SNORD114-27-201ENST00000363766 70 ntBASIC1.27□□□□□ -2.21
LIG1P18858 Y_RNA.258-201ENST00000364613 105 ntBASIC1.27□□□□□ -2.21
LIG1P18858 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
LIG1P18858 RNU6-539P-201ENST00000516665 103 ntBASIC1.27□□□□□ -2.21
LIG1P18858 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.27□□□□□ -2.21
LIG1P18858 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.27□□□□□ -2.21
LIG1P18858 RNU6-382P-201ENST00000365181 106 ntBASIC1.26□□□□□ -2.21
LIG1P18858 RNU6-1335P-201ENST00000365426 107 ntBASIC1.26□□□□□ -2.21
LIG1P18858 snoU13.18-201ENST00000459483 104 ntBASIC1.26□□□□□ -2.21
LIG1P18858 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
LIG1P18858 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.26□□□□□ -2.21
LIG1P18858 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
LIG1P18858 RNU6-495P-201ENST00000362995 107 ntBASIC1.25□□□□□ -2.21
LIG1P18858 RNU6-726P-201ENST00000364680 107 ntBASIC1.25□□□□□ -2.21
LIG1P18858 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
LIG1P18858 SNORD75.2-201ENST00000408784 58 ntBASIC1.25□□□□□ -2.21
LIG1P18858 AC093423.1-201ENST00000440817 142 ntBASIC1.25□□□□□ -2.21
LIG1P18858 RNU6-274P-201ENST00000459566 107 ntBASIC1.25□□□□□ -2.21
LIG1P18858 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
LIG1P18858 MIR6504-201ENST00000613520 61 ntBASIC1.25□□□□□ -2.21
LIG1P18858 MIR4773-1-201ENST00000637203 78 ntBASIC1.25□□□□□ -2.21
LIG1P18858 RNU6-590P-201ENST00000365039 107 ntBASIC1.24□□□□□ -2.21
LIG1P18858 Y_RNA.355-201ENST00000365462 98 ntBASIC1.24□□□□□ -2.21
LIG1P18858 MIR154-201ENST00000385243 84 ntBASIC1.24□□□□□ -2.21
LIG1P18858 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
LIG1P18858 SCARNA16.5-201ENST00000517114 183 ntBASIC1.23□□□□□ -2.21
LIG1P18858 MIR548L-201ENST00000408303 86 ntBASIC1.22□□□□□ -2.21
LIG1P18858 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
LIG1P18858 MIR6828-201ENST00000636181 60 ntBASIC1.22□□□□□ -2.21
LIG1P18858 RNU4-45P-201ENST00000365469 141 ntBASIC1.21□□□□□ -2.22
LIG1P18858 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.21□□□□□ -2.22
LIG1P18858 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
LIG1P18858 SNORD115-31-201ENST00000365318 82 ntBASIC1.2□□□□□ -2.22
LIG1P18858 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
LIG1P18858 RNU6-540P-201ENST00000384622 101 ntBASIC1.2□□□□□ -2.22
LIG1P18858 MT-TY-201ENST00000387409 66 ntBASIC1.2□□□□□ -2.22
LIG1P18858 SNORD99-201ENST00000408612 74 ntBASIC1.2□□□□□ -2.22
LIG1P18858 MIR1276-201ENST00000408707 83 ntBASIC1.2□□□□□ -2.22
LIG1P18858 AC244098.3-201ENST00000424803 96 ntBASIC1.2□□□□□ -2.22
LIG1P18858 RNA5SP220-201ENST00000516298 104 ntBASIC1.2□□□□□ -2.22
LIG1P18858 RNA5SP102-201ENST00000516865 106 ntBASIC1.2□□□□□ -2.22
LIG1P18858 MIR8053-201ENST00000613344 75 ntBASIC1.2□□□□□ -2.22
LIG1P18858 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
LIG1P18858 MIR18A-201ENST00000362310 71 ntBASIC1.19□□□□□ -2.22
LIG1P18858 AC011195.1-201ENST00000578177 177 ntBASIC1.19□□□□□ -2.22
LIG1P18858 MIR4452-201ENST00000583004 71 ntBASIC1.19□□□□□ -2.22
LIG1P18858 SNORD45.1-201ENST00000363181 77 ntBASIC1.18□□□□□ -2.22
LIG1P18858 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
LIG1P18858 SNORA8.2-201ENST00000384372 139 ntBASIC1.18□□□□□ -2.22
LIG1P18858 RNU6-649P-201ENST00000384463 107 ntBASIC1.18□□□□□ -2.22
LIG1P18858 AL691482.2-201ENST00000457453 84 ntBASIC1.18□□□□□ -2.22
LIG1P18858 RNU1-141P-201ENST00000364623 158 ntBASIC1.17□□□□□ -2.22
LIG1P18858 RNU6V-201ENST00000384105 107 ntBASIC1.17□□□□□ -2.22
LIG1P18858 RNU6-269P-201ENST00000391077 97 ntBASIC1.17□□□□□ -2.22
LIG1P18858 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
LIG1P18858 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
LIG1P18858 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
LIG1P18858 SNORD115-22-201ENST00000364456 82 ntBASIC1.16□□□□□ -2.22
LIG1P18858 RNU6-54P-201ENST00000365563 107 ntBASIC1.16□□□□□ -2.22
LIG1P18858 RNU6-1039P-201ENST00000383931 107 ntBASIC1.16□□□□□ -2.22
LIG1P18858 NAMPTP3-201ENST00000569273 224 ntBASIC1.16□□□□□ -2.22
LIG1P18858 SNORD30.1-201ENST00000391309 70 ntBASIC1.15□□□□□ -2.23
LIG1P18858 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
LIG1P18858 MIR4460-201ENST00000577862 86 ntBASIC1.15□□□□□ -2.23
LIG1P18858 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.23
LIG1P18858 AL162376.1-201ENST00000624117 175 ntBASIC1.15□□□□□ -2.23
LIG1P18858 RNU6-1187P-201ENST00000364771 110 ntBASIC1.14□□□□□ -2.23
LIG1P18858 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.14□□□□□ -2.23
LIG1P18858 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
LIG1P18858 RNU6-663P-201ENST00000391105 106 ntBASIC1.13□□□□□ -2.23
LIG1P18858 SNORD42B-201ENST00000458893 67 ntBASIC1.13□□□□□ -2.23
LIG1P18858 AC211469.2-201ENST00000605461 205 ntBASIC1.13□□□□□ -2.23
LIG1P18858 AL353765.1-201ENST00000605514 183 ntBASIC1.13□□□□□ -2.23
LIG1P18858 MIR6509-201ENST00000614603 85 ntBASIC1.13□□□□□ -2.23
LIG1P18858 SNORA36.1-201ENST00000363424 132 ntBASIC1.12□□□□□ -2.23
LIG1P18858 SNORD45A-201ENST00000384512 84 ntBASIC1.12□□□□□ -2.23
LIG1P18858 RPL39P28-201ENST00000465655 155 ntBASIC1.12□□□□□ -2.23
LIG1P18858 U6.111-201ENST00000636093 83 ntBASIC1.12□□□□□ -2.23
LIG1P18858 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LIG1P18858 RNU6-895P-201ENST00000384125 103 ntBASIC1.11□□□□□ -2.23
LIG1P18858 RNU6-604P-201ENST00000390917 100 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 318 ms