Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC069503.3-201ENST00000618674 145 ntBASIC1.6□□□□□ -2.15
HOXD8P13378 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HOXD8P13378 RNA5SP117-201ENST00000365294 118 ntBASIC1.59□□□□□ -2.15
HOXD8P13378 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
HOXD8P13378 RNU6-1177P-201ENST00000391058 104 ntBASIC1.59□□□□□ -2.15
HOXD8P13378 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
HOXD8P13378 RNU6-469P-201ENST00000516253 101 ntBASIC1.59□□□□□ -2.15
HOXD8P13378 MIR4773-1-201ENST00000637203 78 ntBASIC1.59□□□□□ -2.15
HOXD8P13378 SNORD115-22-201ENST00000364456 82 ntBASIC1.58□□□□□ -2.16
HOXD8P13378 SNORD89-201ENST00000390981 114 ntBASIC1.58□□□□□ -2.16
HOXD8P13378 uc_338.16-201ENST00000621804 95 ntBASIC1.58□□□□□ -2.16
HOXD8P13378 SNORA25-201ENST00000384384 134 ntBASIC1.57□□□□□ -2.16
HOXD8P13378 SNORD45A-201ENST00000384512 84 ntBASIC1.57□□□□□ -2.16
HOXD8P13378 AC002429.1-201ENST00000437672 148 ntBASIC1.57□□□□□ -2.16
HOXD8P13378 MIR2113-201ENST00000459007 91 ntBASIC1.57□□□□□ -2.16
HOXD8P13378 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.57□□□□□ -2.16
HOXD8P13378 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HOXD8P13378 SNORD113.1-201ENST00000363280 73 ntBASIC1.56□□□□□ -2.16
HOXD8P13378 RNU6-824P-201ENST00000363724 104 ntBASIC1.56□□□□□ -2.16
HOXD8P13378 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
HOXD8P13378 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.56□□□□□ -2.16
HOXD8P13378 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HOXD8P13378 RNU1-93P-201ENST00000364704 169 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 MIR548L-201ENST00000408303 86 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 RNU6-141P-201ENST00000410499 105 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 AC110620.1-201ENST00000416042 228 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 RNU7-24P-201ENST00000458867 62 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
HOXD8P13378 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
HOXD8P13378 MTND4LP1-201ENST00000446263 157 ntBASIC1.54□□□□□ -2.16
HOXD8P13378 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.54□□□□□ -2.16
HOXD8P13378 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HOXD8P13378 AC244098.3-201ENST00000424803 96 ntBASIC1.53□□□□□ -2.16
HOXD8P13378 AC067863.3-201ENST00000624172 122 ntBASIC1.53□□□□□ -2.16
HOXD8P13378 SNORD116-24-201ENST00000384549 92 ntBASIC1.52□□□□□ -2.17
HOXD8P13378 MIR9-2-201ENST00000384838 87 ntBASIC1.52□□□□□ -2.17
HOXD8P13378 RNU6-604P-201ENST00000390917 100 ntBASIC1.52□□□□□ -2.17
HOXD8P13378 FABP5P4-201ENST00000437203 171 ntBASIC1.52□□□□□ -2.17
HOXD8P13378 RNU7-161P-201ENST00000517289 62 ntBASIC1.52□□□□□ -2.17
HOXD8P13378 RNA5SP403-201ENST00000363598 108 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 RNU6-1126P-201ENST00000384002 107 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 MIR598-201ENST00000384868 97 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 MIR644A-201ENST00000385262 94 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 SNORD105-201ENST00000386910 85 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 SNORD75.2-201ENST00000408784 58 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 RNU6-135P-201ENST00000516769 101 ntBASIC1.51□□□□□ -2.17
HOXD8P13378 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXD8P13378 AL691482.2-201ENST00000457453 84 ntBASIC1.5□□□□□ -2.17
HOXD8P13378 AC002350.1-201ENST00000490759 375 ntBASIC1.5□□□□□ -2.17
HOXD8P13378 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HOXD8P13378 RNU6-382P-201ENST00000365181 106 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 RNU6-614P-201ENST00000384369 107 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 MIR520E-201ENST00000384867 87 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 RNU6-542P-201ENST00000516405 103 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 RNU6-1110P-201ENST00000516462 101 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 MIR3920-201ENST00000581751 86 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 U6.59-201ENST00000615686 107 ntBASIC1.49□□□□□ -2.17
HOXD8P13378 RNU6-1223P-201ENST00000517124 104 ntBASIC1.48□□□□□ -2.17
HOXD8P13378 RNU6-668P-201ENST00000364180 107 ntBASIC1.47□□□□□ -2.17
HOXD8P13378 MIR617-201ENST00000385030 97 ntBASIC1.47□□□□□ -2.17
HOXD8P13378 RNU6-495P-201ENST00000362995 107 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 RNU7-74P-201ENST00000459104 62 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 U7.7-201ENST00000459276 60 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 RPS29P1-201ENST00000465274 159 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 MIR548AG2-201ENST00000581228 64 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 AC073869.9-201ENST00000641610 120 ntBASIC1.46□□□□□ -2.18
HOXD8P13378 RNU6-1335P-201ENST00000365426 107 ntBASIC1.45□□□□□ -2.18
HOXD8P13378 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.45□□□□□ -2.18
HOXD8P13378 AC079150.2-201ENST00000443733 78 ntBASIC1.45□□□□□ -2.18
HOXD8P13378 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
HOXD8P13378 AC244669.1-204ENST00000621564 178 ntBASIC1.45□□□□□ -2.18
HOXD8P13378 RNU6-1039P-201ENST00000383931 107 ntBASIC1.44□□□□□ -2.18
HOXD8P13378 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
HOXD8P13378 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.44□□□□□ -2.18
HOXD8P13378 MIR4639-201ENST00000584938 69 ntBASIC1.44□□□□□ -2.18
HOXD8P13378 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
HOXD8P13378 Y_RNA.258-201ENST00000364613 105 ntBASIC1.43□□□□□ -2.18
HOXD8P13378 RNU6-1187P-201ENST00000364771 110 ntBASIC1.43□□□□□ -2.18
HOXD8P13378 Y_RNA.375-201ENST00000365625 101 ntBASIC1.43□□□□□ -2.18
HOXD8P13378 MIR6788-201ENST00000618842 66 ntBASIC1.43□□□□□ -2.18
HOXD8P13378 RNU6-940P-201ENST00000363433 104 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 RNU6-716P-201ENST00000365621 103 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 MIR200A-201ENST00000384875 90 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 MIR548J-201ENST00000408833 112 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 SNORD124-201ENST00000459577 104 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 MIR151B-201ENST00000584249 96 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 MIR548O2-201ENST00000616090 70 ntBASIC1.42□□□□□ -2.18
HOXD8P13378 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
HOXD8P13378 RNA5SP215-201ENST00000363440 122 ntBASIC1.41□□□□□ -2.18
HOXD8P13378 SNORD28-201ENST00000384706 75 ntBASIC1.41□□□□□ -2.18
HOXD8P13378 MIR519E-201ENST00000385075 84 ntBASIC1.41□□□□□ -2.18
HOXD8P13378 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.41□□□□□ -2.18
HOXD8P13378 RNA5SP436-201ENST00000516020 115 ntBASIC1.41□□□□□ -2.18
HOXD8P13378 MIR6509-201ENST00000614603 85 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms