Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MIR4788-201ENST00000639104 80 ntBASIC-0.21□□□□□ -2.44
KRT3P12035 RNY3P2-201ENST00000362918 102 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 MIR652-201ENST00000385278 98 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 U3.27-201ENST00000391237 200 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 AC068339.1-201ENST00000526965 141 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 MIR4439-201ENST00000583746 80 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 AL590491.3-201ENST00000610731 82 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 uc_338.36-201ENST00000622331 158 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 AL035470.1-201ENST00000622571 220 ntBASIC-0.22□□□□□ -2.44
KRT3P12035 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-80P-201ENST00000384195 107 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-455P-201ENST00000384681 107 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 MIR451A-201ENST00000385059 72 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-284P-201ENST00000411105 106 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU4-63P-201ENST00000411313 118 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU7-107P-201ENST00000459121 61 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 AC114755.3-201ENST00000481111 251 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-75P-201ENST00000515944 104 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-65P-201ENST00000516332 98 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-255P-201ENST00000516957 105 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 MIR4536-1-201ENST00000583537 88 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 MIR4436A-201ENST00000585278 85 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 RNU6-86P-201ENST00000606534 107 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 MIR548AZ-201ENST00000616567 95 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 AC025521.1-201ENST00000621624 286 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 U6.95-201ENST00000636931 70 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 MIR3914-2-201ENST00000637339 95 ntBASIC-0.23□□□□□ -2.45
KRT3P12035 SNORD114-4-201ENST00000363962 75 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 SNORD45B-201ENST00000364617 72 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 SNORD50.2-201ENST00000365465 70 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 SNORD2-201ENST00000459163 69 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 RNU6-971P-201ENST00000516920 106 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 RNA5SP66-201ENST00000517178 101 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 RNA5SP169-201ENST00000517268 117 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 MIR5009-201ENST00000578736 100 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 MIR4432-201ENST00000581823 84 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 AL391099.1-201ENST00000624635 187 ntBASIC-0.24□□□□□ -2.45
KRT3P12035 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 RNU6-900P-201ENST00000384498 102 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 RNU6-813P-201ENST00000384691 107 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 MIR9-2-201ENST00000384838 87 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
KRT3P12035 SNORD75.1-201ENST00000408373 60 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.25□□□□□ -2.45
KRT3P12035 SNORD33.1-201ENST00000516213 88 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 AL513043.2-201ENST00000573941 143 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 MIR3613-201ENST00000579844 87 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 MIR548AX-201ENST00000580117 73 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 AL627230.5-201ENST00000619807 58 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.25□□□□□ -2.45
KRT3P12035 MIR409-201ENST00000362237 79 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 SNORD115-25-201ENST00000362619 82 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 RNU6-54P-201ENST00000365563 107 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 MIR548A1-201ENST00000385041 97 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 MIR548A3-201ENST00000385297 97 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 SNORA49-201ENST00000386157 136 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 MT-TQ-201ENST00000387372 72 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 MIR548U-201ENST00000390728 81 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 RNU6-907P-201ENST00000390924 102 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 RNU6-644P-201ENST00000391155 98 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 RNU7-85P-201ENST00000458851 63 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 RNU6-659P-201ENST00000516454 104 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 AP000676.1-201ENST00000533307 52 ntBASIC-0.26□□□□□ -2.45
KRT3P12035 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 RNU4-36P-201ENST00000364294 144 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 RNA5SP266-201ENST00000410273 108 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 SNORA40.17-201ENST00000517256 115 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 MIR3681-201ENST00000580089 72 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 AC093726.3-201ENST00000637588 150 ntBASIC-0.27□□□□□ -2.45
KRT3P12035 SNORA63.2-201ENST00000362603 126 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNA5SP331-201ENST00000364986 107 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU6-132P-201ENST00000383863 107 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU6-880P-201ENST00000384526 107 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU6-901P-201ENST00000384593 106 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 SNORA3B-201ENST00000391305 131 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 SNORD57-201ENST00000448188 72 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU7-55P-201ENST00000459426 62 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 FGF7P7-201ENST00000514120 227 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU6-412P-201ENST00000516434 106 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 RNU6-762P-201ENST00000517107 102 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 AC103810.7-201ENST00000607821 91 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 AC145423.2-201ENST00000610631 239 ntBASIC-0.28□□□□□ -2.45
KRT3P12035 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms