Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 RNU6-409P-201ENST00000384114 104 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 SNORD57-201ENST00000448188 72 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 RNU6-65P-201ENST00000516332 98 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 AC141273.2-201ENST00000618989 130 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 U6.96-201ENST00000636425 70 ntBASIC-1.1□□□□□ -2.59
SNRPAP09012 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 AC021146.9-201ENST00000512503 156 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 AL117351.2-201ENST00000513571 157 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 MIR3115-201ENST00000577915 68 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 YWHAEP3-201ENST00000582767 121 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 MIR4536-1-201ENST00000583537 88 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 AL442128.1-201ENST00000615151 90 ntBASIC-1.11□□□□□ -2.59
SNRPAP09012 MIR409-201ENST00000362237 79 ntBASIC-1.12□□□□□ -2.59
SNRPAP09012 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.12□□□□□ -2.59
SNRPAP09012 MIR606-201ENST00000384851 96 ntBASIC-1.12□□□□□ -2.59
SNRPAP09012 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.12□□□□□ -2.59
SNRPAP09012 AC025521.1-201ENST00000621624 286 ntBASIC-1.12□□□□□ -2.59
SNRPAP09012 RNU6-495P-201ENST00000362995 107 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 RNU4-32P-201ENST00000363404 141 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 MIR3140-201ENST00000583685 90 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 AL353803.5-201ENST00000599815 141 ntBASIC-1.13□□□□□ -2.59
SNRPAP09012 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.14□□□□□ -2.59
SNRPAP09012 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.14□□□□□ -2.59
SNRPAP09012 RNU7-197P-201ENST00000458836 62 ntBASIC-1.14□□□□□ -2.59
SNRPAP09012 AC130289.1-201ENST00000577321 73 ntBASIC-1.14□□□□□ -2.59
SNRPAP09012 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.14□□□□□ -2.59
SNRPAP09012 AC090617.8-201ENST00000623339 167 ntBASIC-1.14□□□□□ -2.59
SNRPAP09012 RNU6-797P-201ENST00000363101 109 ntBASIC-1.15□□□□□ -2.59
SNRPAP09012 SNORA20.1-201ENST00000364790 130 ntBASIC-1.15□□□□□ -2.59
SNRPAP09012 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.15□□□□□ -2.59
SNRPAP09012 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
SNRPAP09012 MIR4464-201ENST00000580818 92 ntBASIC-1.15□□□□□ -2.59
SNRPAP09012 SNORA63.2-201ENST00000362603 126 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 RNU6-132P-201ENST00000383863 107 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 RNA5SP136-201ENST00000410906 107 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 MIR6888-201ENST00000621977 67 ntBASIC-1.16□□□□□ -2.6
SNRPAP09012 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.16□□□□□ -2.6
SNRPAP09012 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 SNORD50.2-201ENST00000365465 70 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 MIR568-201ENST00000385036 95 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 RNU6-816P-201ENST00000390914 107 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 RNU7-85P-201ENST00000458851 63 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 RNU6-781P-201ENST00000516377 101 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 AC068339.1-201ENST00000526965 141 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 AL445584.3-201ENST00000617173 78 ntBASIC-1.17□□□□□ -2.6
SNRPAP09012 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.18□□□□□ -2.6
SNRPAP09012 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.18□□□□□ -2.6
SNRPAP09012 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.18□□□□□ -2.6
SNRPAP09012 AC062037.2-201ENST00000610137 73 ntBASIC-1.18□□□□□ -2.6
SNRPAP09012 RNU6-151P-201ENST00000364158 107 ntBASIC-1.19□□□□□ -2.6
SNRPAP09012 SNORD75.2-201ENST00000408784 58 ntBASIC-1.19□□□□□ -2.6
SNRPAP09012 MTCYBP9-201ENST00000431021 303 ntBASIC-1.19□□□□□ -2.6
SNRPAP09012 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 MIR548A1-201ENST00000385041 97 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 MIR548U-201ENST00000390728 81 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 RNU6-706P-201ENST00000517229 104 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 AL513043.2-201ENST00000573941 143 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 MIR4320-201ENST00000636981 65 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 AC132825.6-201ENST00000638861 357 ntBASIC-1.2□□□□□ -2.6
SNRPAP09012 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 RNU6-746P-201ENST00000384112 109 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 SNORA24B-201ENST00000384176 131 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 MIR1255B2-201ENST00000408618 67 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 RNU7-24P-201ENST00000458867 62 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 RNA5SP147-201ENST00000516493 109 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 MIR3064-201ENST00000581130 66 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 AC072026.1-201ENST00000605023 201 ntBASIC-1.21□□□□□ -2.6
SNRPAP09012 RNU6-924P-201ENST00000362926 108 ntBASIC-1.22□□□□□ -2.6
SNRPAP09012 RNY4P6-201ENST00000363667 96 ntBASIC-1.22□□□□□ -2.6
SNRPAP09012 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.22□□□□□ -2.6
SNRPAP09012 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.22□□□□□ -2.6
SNRPAP09012 RNU6-861P-201ENST00000516745 106 ntBASIC-1.22□□□□□ -2.6
SNRPAP09012 AC104996.3-201ENST00000590718 94 ntBASIC-1.22□□□□□ -2.6
SNRPAP09012 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.23□□□□□ -2.61
SNRPAP09012 SNORA33.1-201ENST00000364957 130 ntBASIC-1.23□□□□□ -2.61
SNRPAP09012 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.23□□□□□ -2.61
SNRPAP09012 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.23□□□□□ -2.61
SNRPAP09012 RNU6-738P-201ENST00000384531 106 ntBASIC-1.23□□□□□ -2.61
SNRPAP09012 MIR577-201ENST00000385196 96 ntBASIC-1.23□□□□□ -2.61
SNRPAP09012 MIR1302-3-201ENST00000408128 138 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms