Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
CGB1A6NKQ9 MIR3675-201ENST00000583661 73 ntBASIC0.9□□□□□ -2.27
CGB1A6NKQ9 MIR6078-201ENST00000611069 100 ntBASIC0.9□□□□□ -2.27
CGB1A6NKQ9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CGB1A6NKQ9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CGB1A6NKQ9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CGB1A6NKQ9 RNU6-330P-201ENST00000363015 107 ntBASIC0.89□□□□□ -2.27
CGB1A6NKQ9 RNU6-1241P-201ENST00000384536 107 ntBASIC0.89□□□□□ -2.27
CGB1A6NKQ9 MIR573-201ENST00000384964 99 ntBASIC0.89□□□□□ -2.27
CGB1A6NKQ9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.89□□□□□ -2.27
CGB1A6NKQ9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
CGB1A6NKQ9 AC244669.1-204ENST00000621564 178 ntBASIC0.89□□□□□ -2.27
CGB1A6NKQ9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
CGB1A6NKQ9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CGB1A6NKQ9 RNU6-590P-201ENST00000365039 107 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 MIR519E-201ENST00000385075 84 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 MIR548L-201ENST00000408303 86 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.88□□□□□ -2.27
CGB1A6NKQ9 RNU6-752P-201ENST00000516376 102 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 RNU6-539P-201ENST00000516665 103 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 MIR3612-201ENST00000579753 87 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 MIR4773-1-201ENST00000637203 78 ntBASIC0.88□□□□□ -2.27
CGB1A6NKQ9 SNORD18A-201ENST00000363753 72 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 RNU6-382P-201ENST00000365181 106 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 RNU6-42P-201ENST00000384165 107 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 SNORD41.1-201ENST00000391000 69 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.87□□□□□ -2.27
CGB1A6NKQ9 MIR7111-201ENST00000619751 72 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
CGB1A6NKQ9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.86□□□□□ -2.27
CGB1A6NKQ9 SNORD75.2-201ENST00000408784 58 ntBASIC0.86□□□□□ -2.27
CGB1A6NKQ9 RNU7-24P-201ENST00000458867 62 ntBASIC0.86□□□□□ -2.27
CGB1A6NKQ9 RNA5SP47-201ENST00000517230 109 ntBASIC0.86□□□□□ -2.27
CGB1A6NKQ9 MIR3678-201ENST00000578455 94 ntBASIC0.86□□□□□ -2.27
CGB1A6NKQ9 MIR548O2-201ENST00000616090 70 ntBASIC0.86□□□□□ -2.27
CGB1A6NKQ9 RNU6-392P-201ENST00000364926 101 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 MIR8053-201ENST00000613344 75 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
CGB1A6NKQ9 RNU6-495P-201ENST00000362995 107 ntBASIC0.84□□□□□ -2.27
CGB1A6NKQ9 RNU6-726P-201ENST00000364680 107 ntBASIC0.84□□□□□ -2.27
CGB1A6NKQ9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CGB1A6NKQ9 RNU6-649P-201ENST00000384463 107 ntBASIC0.84□□□□□ -2.27
CGB1A6NKQ9 AC244098.3-201ENST00000424803 96 ntBASIC0.84□□□□□ -2.27
CGB1A6NKQ9 AL691482.2-201ENST00000457453 84 ntBASIC0.84□□□□□ -2.27
CGB1A6NKQ9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
CGB1A6NKQ9 SNORD45.1-201ENST00000363181 77 ntBASIC0.83□□□□□ -2.28
CGB1A6NKQ9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
CGB1A6NKQ9 RNU4-45P-201ENST00000365469 141 ntBASIC0.83□□□□□ -2.28
CGB1A6NKQ9 RNU6-540P-201ENST00000384622 101 ntBASIC0.83□□□□□ -2.28
CGB1A6NKQ9 SNORD30.1-201ENST00000391309 70 ntBASIC0.83□□□□□ -2.28
CGB1A6NKQ9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.83□□□□□ -2.28
CGB1A6NKQ9 RNU6-716P-201ENST00000365621 103 ntBASIC0.82□□□□□ -2.28
CGB1A6NKQ9 AC093423.1-201ENST00000440817 142 ntBASIC0.82□□□□□ -2.28
CGB1A6NKQ9 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
CGB1A6NKQ9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.82□□□□□ -2.28
CGB1A6NKQ9 AC011195.1-201ENST00000578177 177 ntBASIC0.82□□□□□ -2.28
CGB1A6NKQ9 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
CGB1A6NKQ9 MIR4295-201ENST00000585286 85 ntBASIC0.82□□□□□ -2.28
CGB1A6NKQ9 SNORD115-31-201ENST00000365318 82 ntBASIC0.81□□□□□ -2.28
CGB1A6NKQ9 MT-TY-201ENST00000387409 66 ntBASIC0.81□□□□□ -2.28
CGB1A6NKQ9 SNORD99-201ENST00000408612 74 ntBASIC0.81□□□□□ -2.28
CGB1A6NKQ9 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
CGB1A6NKQ9 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
CGB1A6NKQ9 MIR18A-201ENST00000362310 71 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 RNU6-54P-201ENST00000365563 107 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 RNU6-1039P-201ENST00000383931 107 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 RNU6V-201ENST00000384105 107 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 RNU6-895P-201ENST00000384125 103 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 SNORA8.2-201ENST00000384372 139 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 RNU6-663P-201ENST00000391105 106 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 NAMPTP3-201ENST00000569273 224 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 MIR4460-201ENST00000577862 86 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 AC103810.9-201ENST00000606688 112 ntBASIC0.8□□□□□ -2.28
CGB1A6NKQ9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CGB1A6NKQ9 SNORD115-22-201ENST00000364456 82 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 RNU1-141P-201ENST00000364623 158 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 SNORD45A-201ENST00000384512 84 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 RNU6-881P-201ENST00000516813 102 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 MIR6509-201ENST00000614603 85 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 U6.111-201ENST00000636093 83 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 MIR6828-201ENST00000636181 60 ntBASIC0.79□□□□□ -2.28
CGB1A6NKQ9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
CGB1A6NKQ9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CGB1A6NKQ9 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
CGB1A6NKQ9 RNU6-604P-201ENST00000390917 100 ntBASIC0.78□□□□□ -2.28
CGB1A6NKQ9 RNU6-269P-201ENST00000391077 97 ntBASIC0.78□□□□□ -2.28
CGB1A6NKQ9 MIR1276-201ENST00000408707 83 ntBASIC0.78□□□□□ -2.28
CGB1A6NKQ9 RNA5SP227-201ENST00000516184 113 ntBASIC0.78□□□□□ -2.28
CGB1A6NKQ9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 349.4 ms