Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHB9Q9Y5E1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PCDHB9Q9Y5E1 SNORD115-24-201ENST00000363528 82 ntBASIC1.8□□□□□ -2.12
PCDHB9Q9Y5E1 RNU6-824P-201ENST00000363724 104 ntBASIC1.8□□□□□ -2.12
PCDHB9Q9Y5E1 SNORA8.1-201ENST00000384250 140 ntBASIC1.8□□□□□ -2.12
PCDHB9Q9Y5E1 MIR222-201ENST00000384992 110 ntBASIC1.8□□□□□ -2.12
PCDHB9Q9Y5E1 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
PCDHB9Q9Y5E1 SNORA25-201ENST00000384384 134 ntBASIC1.78□□□□□ -2.12
PCDHB9Q9Y5E1 MIR2113-201ENST00000459007 91 ntBASIC1.78□□□□□ -2.12
PCDHB9Q9Y5E1 RNU7-161P-201ENST00000517289 62 ntBASIC1.78□□□□□ -2.12
PCDHB9Q9Y5E1 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
PCDHB9Q9Y5E1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PCDHB9Q9Y5E1 RNU6-1126P-201ENST00000384002 107 ntBASIC1.77□□□□□ -2.13
PCDHB9Q9Y5E1 RNU6-1241P-201ENST00000384536 107 ntBASIC1.77□□□□□ -2.13
PCDHB9Q9Y5E1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PCDHB9Q9Y5E1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PCDHB9Q9Y5E1 RNU6-1177P-201ENST00000391058 104 ntBASIC1.76□□□□□ -2.13
PCDHB9Q9Y5E1 MIR3920-201ENST00000581751 86 ntBASIC1.76□□□□□ -2.13
PCDHB9Q9Y5E1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PCDHB9Q9Y5E1 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.76□□□□□ -2.13
PCDHB9Q9Y5E1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PCDHB9Q9Y5E1 RNA5SP327-201ENST00000362494 101 ntBASIC1.75□□□□□ -2.13
PCDHB9Q9Y5E1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.75□□□□□ -2.13
PCDHB9Q9Y5E1 snoU13.18-201ENST00000459483 104 ntBASIC1.75□□□□□ -2.13
PCDHB9Q9Y5E1 AC002350.1-201ENST00000490759 375 ntBASIC1.75□□□□□ -2.13
PCDHB9Q9Y5E1 MIR548AG2-201ENST00000581228 64 ntBASIC1.75□□□□□ -2.13
PCDHB9Q9Y5E1 MIR154-201ENST00000385243 84 ntBASIC1.74□□□□□ -2.13
PCDHB9Q9Y5E1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.74□□□□□ -2.13
PCDHB9Q9Y5E1 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
PCDHB9Q9Y5E1 MIR4303-201ENST00000581299 66 ntBASIC1.74□□□□□ -2.13
PCDHB9Q9Y5E1 MIR3675-201ENST00000583661 73 ntBASIC1.74□□□□□ -2.13
PCDHB9Q9Y5E1 AL136317.1-201ENST00000612653 226 ntBASIC1.74□□□□□ -2.13
PCDHB9Q9Y5E1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
PCDHB9Q9Y5E1 RNU7-104P-201ENST00000459398 79 ntBASIC1.73□□□□□ -2.13
PCDHB9Q9Y5E1 RNU6-135P-201ENST00000516769 101 ntBASIC1.72□□□□□ -2.13
PCDHB9Q9Y5E1 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
PCDHB9Q9Y5E1 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.72□□□□□ -2.13
PCDHB9Q9Y5E1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.72□□□□□ -2.13
PCDHB9Q9Y5E1 Y_RNA.258-201ENST00000364613 105 ntBASIC1.71□□□□□ -2.14
PCDHB9Q9Y5E1 MIR216B-201ENST00000390186 82 ntBASIC1.71□□□□□ -2.14
PCDHB9Q9Y5E1 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 RNA5SP117-201ENST00000365294 118 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 RNU6-649P-201ENST00000384463 107 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 RNU6-540P-201ENST00000384622 101 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 MIR19B1-201ENST00000384829 87 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 MIR489-201ENST00000384923 84 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 MIR617-201ENST00000385030 97 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 SNORD89-201ENST00000390981 114 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 FABP5P4-201ENST00000437203 171 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 RNU1-123P-201ENST00000458950 160 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 RNU7-95P-201ENST00000459222 64 ntBASIC1.7□□□□□ -2.14
PCDHB9Q9Y5E1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.69□□□□□ -2.14
PCDHB9Q9Y5E1 SNORD115-31-201ENST00000365318 82 ntBASIC1.69□□□□□ -2.14
PCDHB9Q9Y5E1 SNORD105-201ENST00000386910 85 ntBASIC1.69□□□□□ -2.14
PCDHB9Q9Y5E1 U7.7-201ENST00000459276 60 ntBASIC1.69□□□□□ -2.14
PCDHB9Q9Y5E1 AC067863.3-201ENST00000624172 122 ntBASIC1.69□□□□□ -2.14
PCDHB9Q9Y5E1 MIR4773-1-201ENST00000637203 78 ntBASIC1.69□□□□□ -2.14
PCDHB9Q9Y5E1 RNU6-382P-201ENST00000365181 106 ntBASIC1.68□□□□□ -2.14
PCDHB9Q9Y5E1 MIR644A-201ENST00000385262 94 ntBASIC1.68□□□□□ -2.14
PCDHB9Q9Y5E1 RNU6-752P-201ENST00000516376 102 ntBASIC1.68□□□□□ -2.14
PCDHB9Q9Y5E1 MIR4639-201ENST00000584938 69 ntBASIC1.68□□□□□ -2.14
PCDHB9Q9Y5E1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PCDHB9Q9Y5E1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.67□□□□□ -2.14
PCDHB9Q9Y5E1 RNU6-274P-201ENST00000459566 107 ntBASIC1.67□□□□□ -2.14
PCDHB9Q9Y5E1 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
PCDHB9Q9Y5E1 AL078603.1-201ENST00000603824 313 ntBASIC1.67□□□□□ -2.14
PCDHB9Q9Y5E1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PCDHB9Q9Y5E1 MIR519E-201ENST00000385075 84 ntBASIC1.66□□□□□ -2.14
PCDHB9Q9Y5E1 SNORD30.1-201ENST00000391309 70 ntBASIC1.66□□□□□ -2.14
PCDHB9Q9Y5E1 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
PCDHB9Q9Y5E1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.65□□□□□ -2.15
PCDHB9Q9Y5E1 RNU6-469P-201ENST00000516253 101 ntBASIC1.65□□□□□ -2.15
PCDHB9Q9Y5E1 MIR6504-201ENST00000613520 61 ntBASIC1.65□□□□□ -2.15
PCDHB9Q9Y5E1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.15
PCDHB9Q9Y5E1 SNORA7.1-201ENST00000363750 139 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 SNORD26-201ENST00000384147 75 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 SNORD28-201ENST00000384706 75 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 SNORD75.2-201ENST00000408784 58 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 RNU7-24P-201ENST00000458867 62 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 AC244669.1-204ENST00000621564 178 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 U6.111-201ENST00000636093 83 ntBASIC1.64□□□□□ -2.15
PCDHB9Q9Y5E1 RNU1-42P-201ENST00000364033 160 ntBASIC1.63□□□□□ -2.15
PCDHB9Q9Y5E1 RNU6-663P-201ENST00000391105 106 ntBASIC1.63□□□□□ -2.15
PCDHB9Q9Y5E1 MIR8053-201ENST00000613344 75 ntBASIC1.63□□□□□ -2.15
PCDHB9Q9Y5E1 MIR548O2-201ENST00000616090 70 ntBASIC1.63□□□□□ -2.15
PCDHB9Q9Y5E1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PCDHB9Q9Y5E1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 SNORD45.1-201ENST00000363181 77 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 RNU6-42P-201ENST00000384165 107 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 SNORD41.1-201ENST00000391000 69 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 AC244098.3-201ENST00000424803 96 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 RNU7-74P-201ENST00000459104 62 ntBASIC1.62□□□□□ -2.15
PCDHB9Q9Y5E1 RNU6-495P-201ENST00000362995 107 ntBASIC1.61□□□□□ -2.15
PCDHB9Q9Y5E1 SNORD18A-201ENST00000363753 72 ntBASIC1.61□□□□□ -2.15
PCDHB9Q9Y5E1 MIR573-201ENST00000384964 99 ntBASIC1.61□□□□□ -2.15
PCDHB9Q9Y5E1 MIR1276-201ENST00000408707 83 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 257.4 ms