Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PNMA3Q9UL41 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
PNMA3Q9UL41 RNU6-994P-201ENST00000410507 111 ntBASIC2.22□□□□□ -2.05
PNMA3Q9UL41 SNORA25.15-201ENST00000516487 89 ntBASIC2.22□□□□□ -2.05
PNMA3Q9UL41 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
PNMA3Q9UL41 snoU13.31-201ENST00000607291 104 ntBASIC2.22□□□□□ -2.05
PNMA3Q9UL41 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
PNMA3Q9UL41 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PNMA3Q9UL41 RNA5SP190-201ENST00000365222 118 ntBASIC2.21□□□□□ -2.06
PNMA3Q9UL41 MIR203A-201ENST00000384836 110 ntBASIC2.21□□□□□ -2.06
PNMA3Q9UL41 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
PNMA3Q9UL41 AC092634.7-201ENST00000621022 103 ntBASIC2.21□□□□□ -2.06
PNMA3Q9UL41 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PNMA3Q9UL41 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PNMA3Q9UL41 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.2□□□□□ -2.06
PNMA3Q9UL41 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
PNMA3Q9UL41 SNORA80D-201ENST00000384488 135 ntBASIC2.2□□□□□ -2.06
PNMA3Q9UL41 MIR100-201ENST00000385259 80 ntBASIC2.2□□□□□ -2.06
PNMA3Q9UL41 MIR934-201ENST00000401241 83 ntBASIC2.2□□□□□ -2.06
PNMA3Q9UL41 MIR4448-201ENST00000584360 86 ntBASIC2.2□□□□□ -2.06
PNMA3Q9UL41 AL157834.3-201ENST00000615543 103 ntBASIC2.2□□□□□ -2.06
PNMA3Q9UL41 MIR378A-201ENST00000362177 66 ntBASIC2.19□□□□□ -2.06
PNMA3Q9UL41 RNU6-829P-201ENST00000363700 112 ntBASIC2.19□□□□□ -2.06
PNMA3Q9UL41 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
PNMA3Q9UL41 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.19□□□□□ -2.06
PNMA3Q9UL41 AC084768.2-201ENST00000622736 221 ntBASIC2.19□□□□□ -2.06
PNMA3Q9UL41 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.19□□□□□ -2.06
PNMA3Q9UL41 SNORA25.5-201ENST00000363782 126 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 MIR519E-201ENST00000385075 84 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 SNORA17.3-201ENST00000391159 129 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 AC067940.1-201ENST00000458411 300 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 RNU7-90P-201ENST00000459216 62 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 RNU7-104P-201ENST00000459398 79 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 MIR3657-201ENST00000584818 117 ntBASIC2.18□□□□□ -2.06
PNMA3Q9UL41 MIR1-1-201ENST00000362147 71 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 RNU6-645P-201ENST00000364649 106 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 RNU6-54P-201ENST00000365563 107 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 RNU1-78P-201ENST00000391248 165 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 SNORD13-201ENST00000459299 104 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 MIR3198-2-201ENST00000577868 80 ntBASIC2.17□□□□□ -2.06
PNMA3Q9UL41 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PNMA3Q9UL41 Y_RNA.236-201ENST00000364427 111 ntBASIC2.16□□□□□ -2.06
PNMA3Q9UL41 MIR520F-201ENST00000384824 87 ntBASIC2.16□□□□□ -2.06
PNMA3Q9UL41 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
PNMA3Q9UL41 RNU6-260P-201ENST00000384092 107 ntBASIC2.15□□□□□ -2.07
PNMA3Q9UL41 MIR7-2-201ENST00000384970 110 ntBASIC2.15□□□□□ -2.07
PNMA3Q9UL41 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
PNMA3Q9UL41 RNU6-910P-201ENST00000390844 107 ntBASIC2.15□□□□□ -2.07
PNMA3Q9UL41 RNU1-123P-201ENST00000458950 160 ntBASIC2.15□□□□□ -2.07
PNMA3Q9UL41 MIR4781-201ENST00000585250 76 ntBASIC2.15□□□□□ -2.07
PNMA3Q9UL41 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PNMA3Q9UL41 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PNMA3Q9UL41 RNU6-1079P-201ENST00000362861 110 ntBASIC2.14□□□□□ -2.07
PNMA3Q9UL41 Y_RNA.226-201ENST00000364337 114 ntBASIC2.14□□□□□ -2.07
PNMA3Q9UL41 RNA5SP192-201ENST00000364404 120 ntBASIC2.14□□□□□ -2.07
PNMA3Q9UL41 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
PNMA3Q9UL41 AC067863.3-201ENST00000624172 122 ntBASIC2.14□□□□□ -2.07
PNMA3Q9UL41 RNU6-940P-201ENST00000363433 104 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PNMA3Q9UL41 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PNMA3Q9UL41 SNORD42B-201ENST00000458893 67 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 SNORD79.1-201ENST00000516069 84 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 MIR466-201ENST00000580653 84 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 MIR4422-201ENST00000581938 83 ntBASIC2.13□□□□□ -2.07
PNMA3Q9UL41 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PNMA3Q9UL41 SNORA67.5-201ENST00000391036 107 ntBASIC2.12□□□□□ -2.07
PNMA3Q9UL41 MIR1827-201ENST00000408549 66 ntBASIC2.12□□□□□ -2.07
PNMA3Q9UL41 SCARNA21.1-201ENST00000515996 128 ntBASIC2.12□□□□□ -2.07
PNMA3Q9UL41 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
PNMA3Q9UL41 SNORA2.1-201ENST00000363089 137 ntBASIC2.11□□□□□ -2.07
PNMA3Q9UL41 RNU6V-201ENST00000384105 107 ntBASIC2.11□□□□□ -2.07
PNMA3Q9UL41 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.11□□□□□ -2.07
PNMA3Q9UL41 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.11□□□□□ -2.07
PNMA3Q9UL41 MIR4255-201ENST00000579351 72 ntBASIC2.11□□□□□ -2.07
PNMA3Q9UL41 RNA5SP215-201ENST00000363440 122 ntBASIC2.1□□□□□ -2.07
PNMA3Q9UL41 RNU6-1335P-201ENST00000365426 107 ntBASIC2.1□□□□□ -2.07
PNMA3Q9UL41 RNU7-74P-201ENST00000459104 62 ntBASIC2.1□□□□□ -2.07
PNMA3Q9UL41 MIR502-201ENST00000606349 86 ntBASIC2.1□□□□□ -2.07
PNMA3Q9UL41 RMST_2.1-201ENST00000617263 136 ntBASIC2.1□□□□□ -2.07
PNMA3Q9UL41 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PNMA3Q9UL41 RNA5SP299-201ENST00000391203 116 ntBASIC2.09□□□□□ -2.07
PNMA3Q9UL41 RNU6-321P-201ENST00000410912 106 ntBASIC2.09□□□□□ -2.07
PNMA3Q9UL41 MIR8081-201ENST00000611533 95 ntBASIC2.09□□□□□ -2.07
PNMA3Q9UL41 AL136317.1-201ENST00000612653 226 ntBASIC2.09□□□□□ -2.07
PNMA3Q9UL41 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
PNMA3Q9UL41 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
PNMA3Q9UL41 MIR1287-201ENST00000408492 90 ntBASIC2.08□□□□□ -2.08
PNMA3Q9UL41 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
PNMA3Q9UL41 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PNMA3Q9UL41 AC008834.1-201ENST00000511612 175 ntBASIC2.07□□□□□ -2.08
PNMA3Q9UL41 RNU6-135P-201ENST00000516769 101 ntBASIC2.07□□□□□ -2.08
PNMA3Q9UL41 RNU6-656P-201ENST00000516785 107 ntBASIC2.07□□□□□ -2.08
PNMA3Q9UL41 RNU6-902P-201ENST00000517212 91 ntBASIC2.07□□□□□ -2.08
PNMA3Q9UL41 SNORA40.17-201ENST00000517256 115 ntBASIC2.07□□□□□ -2.08
PNMA3Q9UL41 SNORD41.1-201ENST00000391000 69 ntBASIC2.06□□□□□ -2.08
PNMA3Q9UL41 RNU4-62P-201ENST00000410125 130 ntBASIC2.06□□□□□ -2.08
PNMA3Q9UL41 AP1B1P2-201ENST00000416196 106 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms