Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MIR6086-201ENST00000638065 55 ntBASIC-1.42□□□□□ -2.64
NKX6-2Q9C056 SNORD114-17-201ENST00000364699 75 ntBASIC-1.43□□□□□ -2.64
NKX6-2Q9C056 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.43□□□□□ -2.64
NKX6-2Q9C056 MIR124-2-201ENST00000385081 109 ntBASIC-1.43□□□□□ -2.64
NKX6-2Q9C056 snoU83B.1-201ENST00000517136 88 ntBASIC-1.43□□□□□ -2.64
NKX6-2Q9C056 AL160413.1-201ENST00000622780 310 ntBASIC-1.43□□□□□ -2.64
NKX6-2Q9C056 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 RNU6-337P-201ENST00000391243 106 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 FGF7P7-201ENST00000514120 227 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 RNU6-719P-201ENST00000516671 104 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 AC134503.1-201ENST00000633048 54 ntBASIC-1.44□□□□□ -2.64
NKX6-2Q9C056 RNU6-30P-201ENST00000384561 107 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 U3.27-201ENST00000391237 200 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 RNU6-985P-201ENST00000410182 104 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 RNU6-635P-201ENST00000516651 102 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 MIR3646-201ENST00000578301 84 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 MIR8062-201ENST00000621515 85 ntBASIC-1.45□□□□□ -2.64
NKX6-2Q9C056 RNU6-238P-201ENST00000363313 106 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 SNORD37.2-201ENST00000391075 66 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 AC022028.1-201ENST00000412054 408 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 MIR3171-201ENST00000584270 74 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 AC138207.3-201ENST00000585289 166 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 MIR3658-201ENST00000636291 56 ntBASIC-1.46□□□□□ -2.64
NKX6-2Q9C056 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.47□□□□□ -2.64
NKX6-2Q9C056 RNU6-75P-201ENST00000515944 104 ntBASIC-1.47□□□□□ -2.64
NKX6-2Q9C056 RNA5SP67-201ENST00000516422 131 ntBASIC-1.47□□□□□ -2.64
NKX6-2Q9C056 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 RNU6-647P-201ENST00000364243 107 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 MTND2P23-201ENST00000422990 651 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 MIR548S-201ENST00000581352 82 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 AC132825.6-201ENST00000638861 357 ntBASIC-1.48□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.49□□□□□ -2.65
NKX6-2Q9C056 MIR759-201ENST00000390224 91 ntBASIC-1.49□□□□□ -2.65
NKX6-2Q9C056 RNU2-38P-201ENST00000410856 79 ntBASIC-1.49□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 RNU6-363P-201ENST00000362895 105 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 SNORA62.4-201ENST00000365504 151 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 MIR548H3-201ENST00000408771 118 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 AC021146.9-201ENST00000512503 156 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.5□□□□□ -2.65
NKX6-2Q9C056 RNU6-208P-201ENST00000362431 107 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 RNU6-990P-201ENST00000364385 104 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 MIR548D2-201ENST00000384955 97 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 RNU6-918P-201ENST00000391219 106 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 HLA-S-202ENST00000425174 53 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 MTATP8P1-201ENST00000467115 207 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 RNU6-65P-201ENST00000516332 98 ntBASIC-1.51□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 RNU6-409P-201ENST00000384114 104 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 AC026421.1-201ENST00000519101 163 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 U6.96-201ENST00000636425 70 ntBASIC-1.52□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.53□□□□□ -2.65
NKX6-2Q9C056 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.53□□□□□ -2.65
NKX6-2Q9C056 AC020661.2-201ENST00000560114 134 ntBASIC-1.53□□□□□ -2.65
NKX6-2Q9C056 AL442128.1-201ENST00000615151 90 ntBASIC-1.53□□□□□ -2.65
NKX6-2Q9C056 AC025521.1-201ENST00000621624 286 ntBASIC-1.53□□□□□ -2.65
NKX6-2Q9C056 RNU6-312P-201ENST00000364629 107 ntBASIC-1.54□□□□□ -2.66
NKX6-2Q9C056 MIR4536-1-201ENST00000583537 88 ntBASIC-1.54□□□□□ -2.66
NKX6-2Q9C056 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 RNU6-639P-201ENST00000384074 107 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 MIR1263-201ENST00000408324 86 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 RNU6-479P-201ENST00000516348 105 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 YWHAEP3-201ENST00000582767 121 ntBASIC-1.55□□□□□ -2.66
NKX6-2Q9C056 SNORA33.2-201ENST00000365413 134 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 RNU6-239P-201ENST00000390990 99 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 AL353803.5-201ENST00000599815 141 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 AC090617.8-201ENST00000623339 167 ntBASIC-1.56□□□□□ -2.66
NKX6-2Q9C056 RNU6-495P-201ENST00000362995 107 ntBASIC-1.57□□□□□ -2.66
NKX6-2Q9C056 RNY3P14-201ENST00000384309 102 ntBASIC-1.57□□□□□ -2.66
NKX6-2Q9C056 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
NKX6-2Q9C056 MIR4464-201ENST00000580818 92 ntBASIC-1.57□□□□□ -2.66
NKX6-2Q9C056 MIR3140-201ENST00000583685 90 ntBASIC-1.57□□□□□ -2.66
NKX6-2Q9C056 SNORA63.2-201ENST00000362603 126 ntBASIC-1.58□□□□□ -2.66
NKX6-2Q9C056 RNU4-32P-201ENST00000363404 141 ntBASIC-1.58□□□□□ -2.66
NKX6-2Q9C056 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.58□□□□□ -2.66
NKX6-2Q9C056 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms