Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-469P-201ENST00000516253 101 ntBASIC0.92□□□□□ -2.26
TIMP4Q99727 RNA5SP255-201ENST00000516370 107 ntBASIC0.92□□□□□ -2.26
TIMP4Q99727 AC025627.3-201ENST00000582078 182 ntBASIC0.92□□□□□ -2.26
TIMP4Q99727 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
TIMP4Q99727 RNU6-161P-201ENST00000363051 106 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-129P-201ENST00000391022 107 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-1052P-201ENST00000411398 104 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-287P-201ENST00000516230 98 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-1108P-201ENST00000516308 104 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-1265P-201ENST00000516342 103 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU7-13P-201ENST00000516413 62 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-638P-201ENST00000516582 104 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU6-719P-201ENST00000516671 104 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 RNU7-161P-201ENST00000517289 62 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
TIMP4Q99727 Y_RNA.207-201ENST00000364142 106 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 MIR573-201ENST00000384964 99 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.9□□□□□ -2.27
TIMP4Q99727 FGF7P7-201ENST00000514120 227 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 RNU6-857P-201ENST00000515893 110 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.9□□□□□ -2.27
TIMP4Q99727 SNORA63.2-201ENST00000362603 126 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 Y_RNA.94-201ENST00000363068 106 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 RNU6-624P-201ENST00000363411 107 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 RNA5SP403-201ENST00000363598 108 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 RNU6-478P-201ENST00000363904 110 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 RNU6-1051P-201ENST00000365471 102 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.89□□□□□ -2.27
TIMP4Q99727 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
TIMP4Q99727 RNU6-1057P-201ENST00000517162 102 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 MIR3140-201ENST00000583685 90 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 MTRNR2L2-201ENST00000604882 87 ntBASIC0.89□□□□□ -2.27
TIMP4Q99727 RNU6-1229P-201ENST00000364295 107 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 Y_RNA.244-201ENST00000364484 109 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 Y_RNA.355-201ENST00000365462 98 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 RNU6-279P-201ENST00000391297 101 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 RNA5SP395-201ENST00000516567 118 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 MIR4712-201ENST00000583750 82 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 AC244669.1-204ENST00000621564 178 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 AC067863.3-201ENST00000624172 122 ntBASIC0.88□□□□□ -2.27
TIMP4Q99727 SNORD28-201ENST00000384706 75 ntBASIC0.87□□□□□ -2.27
TIMP4Q99727 MIR451A-201ENST00000385059 72 ntBASIC0.87□□□□□ -2.27
TIMP4Q99727 MIR548L-201ENST00000408303 86 ntBASIC0.87□□□□□ -2.27
TIMP4Q99727 RNU6-935P-201ENST00000410371 100 ntBASIC0.87□□□□□ -2.27
TIMP4Q99727 snoU13.17-201ENST00000458802 104 ntBASIC0.87□□□□□ -2.27
TIMP4Q99727 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.87□□□□□ -2.27
TIMP4Q99727 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TIMP4Q99727 SNORD115-44-201ENST00000365391 82 ntBASIC0.86□□□□□ -2.27
TIMP4Q99727 RNU6-24P-201ENST00000384440 107 ntBASIC0.86□□□□□ -2.27
TIMP4Q99727 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
TIMP4Q99727 MIR3920-201ENST00000581751 86 ntBASIC0.86□□□□□ -2.27
TIMP4Q99727 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
TIMP4Q99727 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 RNU6-208P-201ENST00000362431 107 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 SNORD18A-201ENST00000363753 72 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 RNY4P3-201ENST00000365254 95 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TIMP4Q99727 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 SNORD77.2-201ENST00000391045 68 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 RNA5SP222-201ENST00000411039 105 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 AC244098.3-201ENST00000424803 96 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 MIR2113-201ENST00000459007 91 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 RNU6-135P-201ENST00000516769 101 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 MIR548AG2-201ENST00000581228 64 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 MIR4639-201ENST00000584938 69 ntBASIC0.85□□□□□ -2.27
TIMP4Q99727 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
TIMP4Q99727 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
TIMP4Q99727 RNU5F-1-201ENST00000362507 117 ntBASIC0.84□□□□□ -2.27
TIMP4Q99727 RNU6-686P-201ENST00000364839 107 ntBASIC0.84□□□□□ -2.27
TIMP4Q99727 RNU6-716P-201ENST00000365621 103 ntBASIC0.84□□□□□ -2.27
TIMP4Q99727 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
TIMP4Q99727 AL078603.1-201ENST00000603824 313 ntBASIC0.84□□□□□ -2.27
TIMP4Q99727 RNU6-315P-201ENST00000362666 107 ntBASIC0.83□□□□□ -2.28
TIMP4Q99727 RNU6-1126P-201ENST00000384002 107 ntBASIC0.83□□□□□ -2.28
TIMP4Q99727 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
TIMP4Q99727 RNA5SP220-201ENST00000516298 104 ntBASIC0.83□□□□□ -2.28
TIMP4Q99727 RNU6-557P-201ENST00000516842 110 ntBASIC0.83□□□□□ -2.28
TIMP4Q99727 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TIMP4Q99727 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TIMP4Q99727 MIRLET7A1-201ENST00000362295 80 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 RNU6-1094P-201ENST00000362416 104 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 Y_RNA.371-201ENST00000365591 113 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 RNU6-42P-201ENST00000384165 107 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 MIR889-201ENST00000401280 79 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 RNA5SP47-201ENST00000517230 109 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
TIMP4Q99727 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
TIMP4Q99727 RNU6-380P-201ENST00000410207 107 ntBASIC0.81□□□□□ -2.28
TIMP4Q99727 MIR4484-201ENST00000582855 83 ntBASIC0.81□□□□□ -2.28
TIMP4Q99727 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
TIMP4Q99727 MIR6788-201ENST00000618842 66 ntBASIC0.81□□□□□ -2.28
TIMP4Q99727 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TIMP4Q99727 Y_RNA.12-201ENST00000362393 112 ntBASIC0.8□□□□□ -2.28
TIMP4Q99727 Y_RNA.264-201ENST00000364665 102 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms