Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 MIR451A-201ENST00000385059 72 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 SNORD127-201ENST00000458892 86 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 snoU13.11-201ENST00000459219 104 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 RNU7-121P-201ENST00000516604 62 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 MIR4499-201ENST00000584834 69 ntBASIC-1.09□□□□□ -2.58
ZNF404Q494X3 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 RNU6-363P-201ENST00000362895 105 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 RNU6-239P-201ENST00000390990 99 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 SNORD42B-201ENST00000458893 67 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.1□□□□□ -2.59
ZNF404Q494X3 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 AL353813.1-201ENST00000440700 253 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 MTCYBP6-201ENST00000441810 138 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 MIR4324-201ENST00000584846 72 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 snoR1.1-201ENST00000628177 80 ntBASIC-1.11□□□□□ -2.59
ZNF404Q494X3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 MIR759-201ENST00000390224 91 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 SNORD37.2-201ENST00000391075 66 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 MIR3121-201ENST00000579680 77 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 MIR6738-201ENST00000619620 64 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 MIR3658-201ENST00000636291 56 ntBASIC-1.12□□□□□ -2.59
ZNF404Q494X3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.13□□□□□ -2.59
ZNF404Q494X3 MIR548F4-201ENST00000408515 105 ntBASIC-1.13□□□□□ -2.59
ZNF404Q494X3 RNU6-75P-201ENST00000515944 104 ntBASIC-1.13□□□□□ -2.59
ZNF404Q494X3 RNU4-71P-201ENST00000516258 113 ntBASIC-1.13□□□□□ -2.59
ZNF404Q494X3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.13□□□□□ -2.59
ZNF404Q494X3 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 MIR548D2-201ENST00000384955 97 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 MIR147A-201ENST00000385079 72 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 AC130289.1-201ENST00000577321 73 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 MIR378F-201ENST00000578143 78 ntBASIC-1.14□□□□□ -2.59
ZNF404Q494X3 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 RNA5SP136-201ENST00000410906 107 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 AC140658.3-201ENST00000567603 271 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 AL442128.1-201ENST00000615151 90 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.15□□□□□ -2.59
ZNF404Q494X3 SNORA63.6-201ENST00000364921 119 ntBASIC-1.16□□□□□ -2.6
ZNF404Q494X3 RNU6-409P-201ENST00000384114 104 ntBASIC-1.16□□□□□ -2.6
ZNF404Q494X3 SNORD64-201ENST00000386683 67 ntBASIC-1.16□□□□□ -2.6
ZNF404Q494X3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.16□□□□□ -2.6
ZNF404Q494X3 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.17□□□□□ -2.6
ZNF404Q494X3 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 RN7SKP19-201ENST00000516016 252 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.18□□□□□ -2.6
ZNF404Q494X3 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 RNU6-647P-201ENST00000364243 107 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 AC044792.1-201ENST00000593294 196 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 MIR382-201ENST00000637119 76 ntBASIC-1.19□□□□□ -2.6
ZNF404Q494X3 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.2□□□□□ -2.6
ZNF404Q494X3 RNU7-197P-201ENST00000458836 62 ntBASIC-1.2□□□□□ -2.6
ZNF404Q494X3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.2□□□□□ -2.6
ZNF404Q494X3 RNU6-719P-201ENST00000516671 104 ntBASIC-1.2□□□□□ -2.6
ZNF404Q494X3 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.2□□□□□ -2.6
ZNF404Q494X3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.2□□□□□ -2.6
ZNF404Q494X3 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 MIR1263-201ENST00000408324 86 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 FGF7P7-201ENST00000514120 227 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 AL117187.1-201ENST00000555482 181 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.21□□□□□ -2.6
ZNF404Q494X3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.22□□□□□ -2.6
ZNF404Q494X3 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.22□□□□□ -2.6
ZNF404Q494X3 SNORD50.2-201ENST00000365465 70 ntBASIC-1.22□□□□□ -2.6
ZNF404Q494X3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.22□□□□□ -2.6
ZNF404Q494X3 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.22□□□□□ -2.6
ZNF404Q494X3 AC025521.1-201ENST00000621624 286 ntBASIC-1.22□□□□□ -2.6
ZNF404Q494X3 MIR409-201ENST00000362237 79 ntBASIC-1.23□□□□□ -2.61
ZNF404Q494X3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.23□□□□□ -2.61
ZNF404Q494X3 RNU6-915P-201ENST00000364943 103 ntBASIC-1.23□□□□□ -2.61
ZNF404Q494X3 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.23□□□□□ -2.61
ZNF404Q494X3 RNY4P6-201ENST00000363667 96 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms