Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-719P-201ENST00000516671 104 ntBASIC-2.71□□□□□ -2.84
TPM4P67936 MIR3163-201ENST00000581592 73 ntBASIC-2.71□□□□□ -2.84
TPM4P67936 SNORA2.1-201ENST00000363089 137 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 RNU6-275P-201ENST00000364910 107 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 SNORA7.5-201ENST00000410672 110 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 AL589823.1-201ENST00000429577 183 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 SNORD57-201ENST00000448188 72 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 FGF7P7-201ENST00000514120 227 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 RNU6-75P-201ENST00000515944 104 ntBASIC-2.72□□□□□ -2.84
TPM4P67936 RNU6-495P-201ENST00000362995 107 ntBASIC-2.73□□□□□ -2.85
TPM4P67936 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.73□□□□□ -2.85
TPM4P67936 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.73□□□□□ -2.85
TPM4P67936 RNU6-164P-201ENST00000364604 103 ntBASIC-2.73□□□□□ -2.85
TPM4P67936 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.73□□□□□ -2.85
TPM4P67936 MIR409-201ENST00000362237 79 ntBASIC-2.74□□□□□ -2.85
TPM4P67936 RNU6-508P-201ENST00000363231 103 ntBASIC-2.74□□□□□ -2.85
TPM4P67936 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.74□□□□□ -2.85
TPM4P67936 RNA5SP476-201ENST00000516613 103 ntBASIC-2.74□□□□□ -2.85
TPM4P67936 MIR3149-201ENST00000584629 83 ntBASIC-2.74□□□□□ -2.85
TPM4P67936 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.74□□□□□ -2.85
TPM4P67936 RNU6-924P-201ENST00000362926 108 ntBASIC-2.75□□□□□ -2.85
TPM4P67936 SNORD18B-201ENST00000365659 72 ntBASIC-2.75□□□□□ -2.85
TPM4P67936 SNORA75.5-201ENST00000391291 81 ntBASIC-2.75□□□□□ -2.85
TPM4P67936 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.75□□□□□ -2.85
TPM4P67936 MT-TI-201ENST00000387365 69 ntBASIC-2.76□□□□□ -2.85
TPM4P67936 RNU6-309P-201ENST00000364573 106 ntBASIC-2.77□□□□□ -2.85
TPM4P67936 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.77□□□□□ -2.85
TPM4P67936 RNY3P16-201ENST00000516338 101 ntBASIC-2.77□□□□□ -2.85
TPM4P67936 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.77□□□□□ -2.85
TPM4P67936 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.78□□□□□ -2.85
TPM4P67936 RNA5SP86-201ENST00000390869 98 ntBASIC-2.78□□□□□ -2.85
TPM4P67936 Z83846.1-201ENST00000446798 265 ntBASIC-2.78□□□□□ -2.85
TPM4P67936 AC021753.1-201ENST00000635724 168 ntBASIC-2.78□□□□□ -2.85
TPM4P67936 RNU6-493P-201ENST00000391321 108 ntBASIC-2.8□□□□□ -2.86
TPM4P67936 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.8□□□□□ -2.86
TPM4P67936 MIR335-201ENST00000362173 94 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 MIR507-201ENST00000385234 94 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 SNORD75.2-201ENST00000408784 58 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.81□□□□□ -2.86
TPM4P67936 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.82□□□□□ -2.86
TPM4P67936 SNORD116-4-201ENST00000384733 96 ntBASIC-2.82□□□□□ -2.86
TPM4P67936 RNU6-65P-201ENST00000516332 98 ntBASIC-2.82□□□□□ -2.86
TPM4P67936 AL078595.1-201ENST00000404458 226 ntBASIC-2.83□□□□□ -2.86
TPM4P67936 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.83□□□□□ -2.86
TPM4P67936 MTND1P19-201ENST00000511780 315 ntBASIC-2.83□□□□□ -2.86
TPM4P67936 AC107027.2-201ENST00000512197 115 ntBASIC-2.83□□□□□ -2.86
TPM4P67936 AP002795.1-201ENST00000534879 84 ntBASIC-2.83□□□□□ -2.86
TPM4P67936 SNORA63.2-201ENST00000362603 126 ntBASIC-2.84□□□□□ -2.86
TPM4P67936 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.84□□□□□ -2.86
TPM4P67936 AL353691.2-201ENST00000443795 59 ntBASIC-2.84□□□□□ -2.86
TPM4P67936 AC113195.1-201ENST00000579952 141 ntBASIC-2.84□□□□□ -2.86
TPM4P67936 MIR4536-1-201ENST00000583537 88 ntBASIC-2.84□□□□□ -2.86
TPM4P67936 RNU6-363P-201ENST00000362895 105 ntBASIC-2.85□□□□□ -2.87
TPM4P67936 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.85□□□□□ -2.87
TPM4P67936 MIR1255B2-201ENST00000408618 67 ntBASIC-2.85□□□□□ -2.87
TPM4P67936 RNU7-24P-201ENST00000458867 62 ntBASIC-2.85□□□□□ -2.87
TPM4P67936 MIR6844-201ENST00000637122 62 ntBASIC-2.85□□□□□ -2.87
TPM4P67936 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.86□□□□□ -2.87
TPM4P67936 MIR4643-201ENST00000577473 78 ntBASIC-2.86□□□□□ -2.87
TPM4P67936 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.86□□□□□ -2.87
TPM4P67936 U6.106-201ENST00000636360 105 ntBASIC-2.86□□□□□ -2.87
TPM4P67936 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.87□□□□□ -2.87
TPM4P67936 RNY3P1-201ENST00000365085 102 ntBASIC-2.87□□□□□ -2.87
TPM4P67936 RNU6-80P-201ENST00000384195 107 ntBASIC-2.87□□□□□ -2.87
TPM4P67936 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.87□□□□□ -2.87
TPM4P67936 HAR1A.1-201ENST00000459583 118 ntBASIC-2.87□□□□□ -2.87
TPM4P67936 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.87□□□□□ -2.87
TPM4P67936 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 MIR548A1-201ENST00000385041 97 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 MIR548H1-201ENST00000408610 102 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 MIR1246-201ENST00000636535 73 ntBASIC-2.88□□□□□ -2.87
TPM4P67936 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.89□□□□□ -2.87
TPM4P67936 RNA5SP180-201ENST00000516181 101 ntBASIC-2.89□□□□□ -2.87
TPM4P67936 MIR3646-201ENST00000578301 84 ntBASIC-2.89□□□□□ -2.87
TPM4P67936 AL442128.1-201ENST00000615151 90 ntBASIC-2.89□□□□□ -2.87
TPM4P67936 MIR369-201ENST00000362155 70 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 RNU6-704P-201ENST00000364162 103 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 SNORA33.1-201ENST00000364957 130 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 MIR759-201ENST00000390224 91 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 RNA5SP266-201ENST00000410273 108 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 MIR3140-201ENST00000583685 90 ntBASIC-2.9□□□□□ -2.87
TPM4P67936 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.91□□□□□ -2.88
TPM4P67936 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.91□□□□□ -2.88
TPM4P67936 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.91□□□□□ -2.88
TPM4P67936 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.91□□□□□ -2.88
TPM4P67936 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.91□□□□□ -2.88
TPM4P67936 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.91□□□□□ -2.88
TPM4P67936 SNORD42.2-201ENST00000365570 69 ntBASIC-2.92□□□□□ -2.88
TPM4P67936 RNU6-409P-201ENST00000384114 104 ntBASIC-2.92□□□□□ -2.88
TPM4P67936 SNORA24B-201ENST00000384176 131 ntBASIC-2.92□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms