Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.7□□□□□ -2.68
CAV3P56539 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 SNORA24B-201ENST00000384176 131 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 FGF7P6-202ENST00000451282 293 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 AC021753.1-201ENST00000635724 168 ntBASIC-1.71□□□□□ -2.68
CAV3P56539 SNORA63.2-201ENST00000362603 126 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 MIR548A1-201ENST00000385041 97 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 AL078595.1-201ENST00000404458 226 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 SNORD75.2-201ENST00000408784 58 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 RNY3P16-201ENST00000516338 101 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 RNU6-720P-201ENST00000516363 108 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.72□□□□□ -2.68
CAV3P56539 RNU6-132P-201ENST00000383863 107 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 RNU6-80P-201ENST00000384195 107 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.73□□□□□ -2.69
CAV3P56539 snoU13.17-201ENST00000458802 104 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 RNU7-24P-201ENST00000458867 62 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 RNU6-65P-201ENST00000516332 98 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 RNA5SP147-201ENST00000516493 109 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 AP002795.1-201ENST00000534879 84 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 CYP3A54P-201ENST00000566950 75 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 MIR3163-201ENST00000581592 73 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 MIR4536-1-201ENST00000583537 88 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 U2.14-201ENST00000615943 113 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.73□□□□□ -2.69
CAV3P56539 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 MIR759-201ENST00000390224 91 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 RNU7-85P-201ENST00000458851 63 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 SNORD19B-201ENST00000459623 84 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 AC025521.1-201ENST00000621624 286 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 MIR1302-1-201ENST00000637932 143 ntBASIC-1.74□□□□□ -2.69
CAV3P56539 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
CAV3P56539 MIR3149-201ENST00000584629 83 ntBASIC-1.75□□□□□ -2.69
CAV3P56539 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.75□□□□□ -2.69
CAV3P56539 RNY1P11-201ENST00000363759 113 ntBASIC-1.76□□□□□ -2.69
CAV3P56539 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.76□□□□□ -2.69
CAV3P56539 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.76□□□□□ -2.69
CAV3P56539 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.76□□□□□ -2.69
CAV3P56539 MT-TL1-201ENST00000386347 75 ntBASIC-1.76□□□□□ -2.69
CAV3P56539 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.76□□□□□ -2.69
CAV3P56539 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.76□□□□□ -2.69
CAV3P56539 RNU6-363P-201ENST00000362895 105 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNU6-260P-201ENST00000384092 107 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNA5SP86-201ENST00000390869 98 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNU6-493P-201ENST00000391321 108 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNU6-101P-201ENST00000410323 104 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNA5SP461-201ENST00000516451 104 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.77□□□□□ -2.69
CAV3P56539 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 RNU6-275P-201ENST00000364910 107 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 SNORD50.2-201ENST00000365465 70 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 SNORD19-201ENST00000391191 68 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 SNORA75.5-201ENST00000391291 81 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 RPL35AP4-201ENST00000412007 102 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 RNU6-732P-201ENST00000516033 103 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 AL442128.1-201ENST00000615151 90 ntBASIC-1.78□□□□□ -2.69
CAV3P56539 RNU6-382P-201ENST00000365181 106 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 SNORD18B-201ENST00000365659 72 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 MIR203A-201ENST00000384836 110 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 MT-TW-201ENST00000387382 68 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 RNU6-876P-201ENST00000391295 104 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 Z83846.1-201ENST00000446798 265 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 AC090616.4-201ENST00000448026 115 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 AL132765.2-201ENST00000610812 351 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.79□□□□□ -2.7
CAV3P56539 MIR198-201ENST00000637333 62 ntBASIC-1.79□□□□□ -2.7
CAV3P56539 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 MIR519A2-201ENST00000384990 87 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 MIR548H1-201ENST00000408610 102 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.8□□□□□ -2.7
CAV3P56539 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 RNU6-168P-201ENST00000516189 101 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 MIR4643-201ENST00000577473 78 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 MIR3064-201ENST00000581130 66 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 U6.106-201ENST00000636360 105 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 MIR5683-201ENST00000636514 76 ntBASIC-1.8□□□□□ -2.7
CAV3P56539 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.81□□□□□ -2.7
CAV3P56539 SNORD90-201ENST00000391145 111 ntBASIC-1.81□□□□□ -2.7
CAV3P56539 RNU7-154P-201ENST00000516194 62 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms