Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MTND5P18-201ENST00000445624 1801 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 SNORD58.1-201ENST00000391313 66 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 RNU6-881P-201ENST00000516813 102 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 AC044792.1-201ENST00000593294 196 ntBASIC-1.06□□□□□ -2.58
NPHP4O75161 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 RNU6-476P-201ENST00000384726 107 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 MIR548E-201ENST00000408287 88 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 MIR3179-1-201ENST00000578940 84 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 MIR3179-2-201ENST00000579107 84 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 MIR3179-3-201ENST00000579566 84 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 MIR3165-201ENST00000579874 75 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 MIR3179-4-201ENST00000617599 84 ntBASIC-1.07□□□□□ -2.58
NPHP4O75161 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 MIR518B-201ENST00000385127 83 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 RNU6-239P-201ENST00000390990 99 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 RNU6-466P-201ENST00000391224 103 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 SNORD22.1-201ENST00000516331 125 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 SNORA40.17-201ENST00000517256 115 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 MIR4441-201ENST00000582623 100 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 MIR8068-201ENST00000618032 68 ntBASIC-1.08□□□□□ -2.58
NPHP4O75161 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.09□□□□□ -2.58
NPHP4O75161 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.09□□□□□ -2.58
NPHP4O75161 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 RNU6-235P-201ENST00000362644 107 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 SNORD38.1-201ENST00000363863 68 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 RNU6-973P-201ENST00000364690 107 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 AL353813.1-201ENST00000440700 253 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.1□□□□□ -2.59
NPHP4O75161 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.1□□□□□ -2.59
NPHP4O75161 MIR3128-201ENST00000581957 66 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.1□□□□□ -2.59
NPHP4O75161 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNU6-502P-201ENST00000362419 108 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNY4P6-201ENST00000363667 96 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNA5SP192-201ENST00000364404 120 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 MIR216B-201ENST00000390186 82 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 MIR1285-2-201ENST00000408311 88 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNU6-935P-201ENST00000410371 100 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNU4-71P-201ENST00000516258 113 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 RNU7-121P-201ENST00000516604 62 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 MIR3121-201ENST00000579680 77 ntBASIC-1.11□□□□□ -2.59
NPHP4O75161 SNORD114-25-201ENST00000363742 72 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 RNU6-867P-201ENST00000364956 107 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 MIR451A-201ENST00000385059 72 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 MIR517B-201ENST00000385102 67 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 SNORD42B-201ENST00000458893 67 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 RNU6-719P-201ENST00000516671 104 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 RNU6-111P-201ENST00000517179 105 ntBASIC-1.12□□□□□ -2.59
NPHP4O75161 RNU6-363P-201ENST00000362895 105 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 MIR759-201ENST00000390224 91 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 MIR1263-201ENST00000408324 86 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 AP000533.3-201ENST00000447704 118 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 MIR6854-201ENST00000614935 69 ntBASIC-1.13□□□□□ -2.59
NPHP4O75161 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 SNORA13-201ENST00000458790 133 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 RN7SKP19-201ENST00000516016 252 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 AL117187.1-201ENST00000555482 181 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 AC008737.2-201ENST00000599446 118 ntBASIC-1.14□□□□□ -2.59
NPHP4O75161 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 RNU6-460P-201ENST00000391158 108 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 SNORD2-201ENST00000459163 69 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 AC022137.1-201ENST00000483735 151 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 RNU4-36P-201ENST00000364294 144 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 MIR548D2-201ENST00000384955 97 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
NPHP4O75161 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 AC141273.2-201ENST00000618989 130 ntBASIC-1.15□□□□□ -2.59
NPHP4O75161 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 RNU4-11P-201ENST00000365287 132 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 RNU6-409P-201ENST00000384114 104 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 RNA5SP461-201ENST00000516451 104 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.16□□□□□ -2.6
NPHP4O75161 SNORD114-4-201ENST00000363962 75 ntBASIC-1.17□□□□□ -2.6
NPHP4O75161 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.17□□□□□ -2.6
NPHP4O75161 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.17□□□□□ -2.6
NPHP4O75161 RNU6-905P-201ENST00000384434 107 ntBASIC-1.17□□□□□ -2.6
NPHP4O75161 RNU6-75P-201ENST00000515944 104 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms