Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR3657-201ENST00000584818 117 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ACTN4O43707 RNA5SP192-201ENST00000364404 120 ntBASIC2.11□□□□□ -2.07
ACTN4O43707 Y_RNA.236-201ENST00000364427 111 ntBASIC2.11□□□□□ -2.07
ACTN4O43707 RNU6-1335P-201ENST00000365426 107 ntBASIC2.11□□□□□ -2.07
ACTN4O43707 MIR520F-201ENST00000384824 87 ntBASIC2.11□□□□□ -2.07
ACTN4O43707 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
ACTN4O43707 RNU6-260P-201ENST00000384092 107 ntBASIC2.1□□□□□ -2.07
ACTN4O43707 MIR519E-201ENST00000385075 84 ntBASIC2.1□□□□□ -2.07
ACTN4O43707 RNU7-90P-201ENST00000459216 62 ntBASIC2.1□□□□□ -2.07
ACTN4O43707 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ACTN4O43707 RNU6-940P-201ENST00000363433 104 ntBASIC2.09□□□□□ -2.07
ACTN4O43707 MIR7-2-201ENST00000384970 110 ntBASIC2.09□□□□□ -2.07
ACTN4O43707 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.09□□□□□ -2.07
ACTN4O43707 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
ACTN4O43707 AC067863.3-201ENST00000624172 122 ntBASIC2.09□□□□□ -2.07
ACTN4O43707 RNU6-910P-201ENST00000390844 107 ntBASIC2.08□□□□□ -2.08
ACTN4O43707 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
ACTN4O43707 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
ACTN4O43707 SCARNA21.1-201ENST00000515996 128 ntBASIC2.08□□□□□ -2.08
ACTN4O43707 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ACTN4O43707 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
ACTN4O43707 SNORA16.1-201ENST00000364597 132 ntBASIC2.07□□□□□ -2.08
ACTN4O43707 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ACTN4O43707 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
ACTN4O43707 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
ACTN4O43707 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
ACTN4O43707 RNU6V-201ENST00000384105 107 ntBASIC2.06□□□□□ -2.08
ACTN4O43707 RNA5SP299-201ENST00000391203 116 ntBASIC2.06□□□□□ -2.08
ACTN4O43707 RNU1-123P-201ENST00000458950 160 ntBASIC2.06□□□□□ -2.08
ACTN4O43707 snoU13.15-201ENST00000459407 104 ntBASIC2.06□□□□□ -2.08
ACTN4O43707 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
ACTN4O43707 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
ACTN4O43707 SNORD42B-201ENST00000458893 67 ntBASIC2.05□□□□□ -2.08
ACTN4O43707 RNU7-74P-201ENST00000459104 62 ntBASIC2.05□□□□□ -2.08
ACTN4O43707 AL136317.1-201ENST00000612653 226 ntBASIC2.05□□□□□ -2.08
ACTN4O43707 MIR7843-201ENST00000622274 79 ntBASIC2.05□□□□□ -2.08
ACTN4O43707 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ACTN4O43707 SNORA2.1-201ENST00000363089 137 ntBASIC2.04□□□□□ -2.08
ACTN4O43707 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
ACTN4O43707 RNU1-78P-201ENST00000391248 165 ntBASIC2.04□□□□□ -2.08
ACTN4O43707 RNU6-237P-201ENST00000515985 71 ntBASIC2.04□□□□□ -2.08
ACTN4O43707 SNORD79.1-201ENST00000516069 84 ntBASIC2.03□□□□□ -2.08
ACTN4O43707 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.03□□□□□ -2.08
ACTN4O43707 MIR4419B-201ENST00000577260 68 ntBASIC2.03□□□□□ -2.08
ACTN4O43707 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ACTN4O43707 RNA5SP215-201ENST00000363440 122 ntBASIC2.02□□□□□ -2.09
ACTN4O43707 RNA5SP147-201ENST00000516493 109 ntBASIC2.02□□□□□ -2.09
ACTN4O43707 MIR4422-201ENST00000581938 83 ntBASIC2.02□□□□□ -2.09
ACTN4O43707 RNA5SP117-201ENST00000365294 118 ntBASIC2.01□□□□□ -2.09
ACTN4O43707 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.01□□□□□ -2.09
ACTN4O43707 MIR1827-201ENST00000408549 66 ntBASIC2.01□□□□□ -2.09
ACTN4O43707 MIR4524B-201ENST00000581569 115 ntBASIC2.01□□□□□ -2.09
ACTN4O43707 MIR4781-201ENST00000585250 76 ntBASIC2□□□□□ -2.09
ACTN4O43707 RMST_2.1-201ENST00000617263 136 ntBASIC2□□□□□ -2.09
ACTN4O43707 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ACTN4O43707 SNORD114-1-201ENST00000362705 72 ntBASIC1.99□□□□□ -2.09
ACTN4O43707 MIR644A-201ENST00000385262 94 ntBASIC1.99□□□□□ -2.09
ACTN4O43707 RNU6-1089P-201ENST00000516473 104 ntBASIC1.99□□□□□ -2.09
ACTN4O43707 RNU6-656P-201ENST00000516785 107 ntBASIC1.99□□□□□ -2.09
ACTN4O43707 RNU6-990P-201ENST00000364385 104 ntBASIC1.98□□□□□ -2.09
ACTN4O43707 RNU6-302P-201ENST00000365249 107 ntBASIC1.98□□□□□ -2.09
ACTN4O43707 MIR548L-201ENST00000408303 86 ntBASIC1.98□□□□□ -2.09
ACTN4O43707 snoU13.23-201ENST00000458863 104 ntBASIC1.98□□□□□ -2.09
ACTN4O43707 RNU6-135P-201ENST00000516769 101 ntBASIC1.98□□□□□ -2.09
ACTN4O43707 SNORA7.1-201ENST00000363750 139 ntBASIC1.97□□□□□ -2.09
ACTN4O43707 RNU6-469P-201ENST00000516253 101 ntBASIC1.97□□□□□ -2.09
ACTN4O43707 RNU6-902P-201ENST00000517212 91 ntBASIC1.97□□□□□ -2.09
ACTN4O43707 Y_RNA.722-201ENST00000517279 114 ntBASIC1.97□□□□□ -2.09
ACTN4O43707 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
ACTN4O43707 MIR4460-201ENST00000577862 86 ntBASIC1.97□□□□□ -2.09
ACTN4O43707 MT-TY-201ENST00000387409 66 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 AC002350.1-201ENST00000490759 375 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 AC008834.1-201ENST00000511612 175 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 SNORA70.22-201ENST00000517160 124 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 MIR548V-201ENST00000584165 80 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 AC244669.1-204ENST00000621564 178 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 MIR6739-201ENST00000622461 75 ntBASIC1.96□□□□□ -2.1
ACTN4O43707 RNU6-446P-201ENST00000362827 106 ntBASIC1.95□□□□□ -2.1
ACTN4O43707 SNORD41.1-201ENST00000391000 69 ntBASIC1.95□□□□□ -2.1
ACTN4O43707 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.95□□□□□ -2.1
ACTN4O43707 RNU6-122P-201ENST00000516818 107 ntBASIC1.95□□□□□ -2.1
ACTN4O43707 MIR4639-201ENST00000584938 69 ntBASIC1.95□□□□□ -2.1
ACTN4O43707 RNU6-92P-201ENST00000605893 104 ntBASIC1.95□□□□□ -2.1
ACTN4O43707 RNA5SP432-201ENST00000362480 116 ntBASIC1.94□□□□□ -2.1
ACTN4O43707 AC108210.2-201ENST00000503681 201 ntBASIC1.94□□□□□ -2.1
ACTN4O43707 SNORA40.17-201ENST00000517256 115 ntBASIC1.94□□□□□ -2.1
ACTN4O43707 MIR3938-201ENST00000582157 103 ntBASIC1.94□□□□□ -2.1
ACTN4O43707 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ACTN4O43707 SNORD28-201ENST00000384706 75 ntBASIC1.93□□□□□ -2.1
ACTN4O43707 MIR548C-201ENST00000384815 97 ntBASIC1.93□□□□□ -2.1
ACTN4O43707 RNU6-482P-201ENST00000391068 107 ntBASIC1.93□□□□□ -2.1
ACTN4O43707 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.93□□□□□ -2.1
ACTN4O43707 AC018659.1-201ENST00000551083 169 ntBASIC1.93□□□□□ -2.1
ACTN4O43707 MIR7978-201ENST00000636158 59 ntBASIC1.93□□□□□ -2.1
ACTN4O43707 RNU6-1162P-201ENST00000384443 104 ntBASIC1.92□□□□□ -2.1
ACTN4O43707 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 372.3 ms